RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 LIPFP07098 398 aa15.89■□□□□ 0.13
TREX1-205ENST00000625293 PRRX1P54821 245 aa15.89■□□□□ 0.13
TREX1-205ENST00000625293 HNF4GQ14541 408 aa15.89■□□□□ 0.13
TREX1-205ENST00000625293 LCN15Q6UWW0 184 aa15.89■□□□□ 0.13
TREX1-205ENST00000625293 TREML4Q6UXN2 200 aa15.89■□□□□ 0.13
TREX1-205ENST00000625293 CLRN3Q8NCR9 226 aa15.89■□□□□ 0.13
TREX1-205ENST00000625293 C1orf159Q96HA4 380 aa15.89■□□□□ 0.13
TREX1-205ENST00000625293 NOTCH2Q04721 2471 aa15.89■□□□□ 0.13
TREX1-205ENST00000625293 LOC102723971A0A1B0GUV8 181 aa15.88■□□□□ 0.13
TREX1-205ENST00000625293 C17orf112F2Z3M2 114 aa15.88■□□□□ 0.13
TREX1-205ENST00000625293 INS-IGF2F8WCM5 200 aa15.88■□□□□ 0.13
TREX1-205ENST00000625293 BUB1B-PAK6H3BSN5 160 aa15.88■□□□□ 0.13
TREX1-205ENST00000625293 NUPL2O15504 423 aaKnown RBP15.88■□□□□ 0.13
TREX1-205ENST00000625293 MPDU1O75352 247 aa15.88■□□□□ 0.13
TREX1-205ENST00000625293 SRP19P09132 144 aaKnown RBP15.88■□□□□ 0.13
TREX1-205ENST00000625293 USF1P22415 310 aaPredicted RBP15.88■□□□□ 0.13
TREX1-205ENST00000625293 HAGHQ16775 308 aa15.88■□□□□ 0.13
TREX1-205ENST00000625293 FFAR4Q5NUL3 377 aa15.88■□□□□ 0.13
TREX1-205ENST00000625293 ZNF709Q8N972 641 aa15.88■□□□□ 0.13
TREX1-205ENST00000625293 OR4P4Q8NGL7 312 aa15.88■□□□□ 0.13
TREX1-205ENST00000625293 VSTM2AQ8TAG5 236 aa15.88■□□□□ 0.13
TREX1-205ENST00000625293 NDUFA4L2Q9NRX3 87 aa15.88■□□□□ 0.13
TREX1-205ENST00000625293 LRBAP50851 2863 aa15.88■□□□□ 0.13
TREX1-205ENST00000625293 MAP1LC3B2A6NCE7 125 aa15.87■□□□□ 0.13
TREX1-205ENST00000625293 HSPB1P04792 205 aaKnown RBP15.87■□□□□ 0.13
TREX1-205ENST00000625293 IFNA4P05014 189 aa15.87■□□□□ 0.13
TREX1-205ENST00000625293 CDKN1AP38936 164 aa15.87■□□□□ 0.13
TREX1-205ENST00000625293 ATP5IP56385 69 aaPredicted RBP15.87■□□□□ 0.13
TREX1-205ENST00000625293 RPL8P62917 257 aaKnown RBP15.87■□□□□ 0.13
TREX1-205ENST00000625293 PMS2P11Q13670 270 aa15.87■□□□□ 0.13
TREX1-205ENST00000625293 KHDC3LQ587J8 217 aa15.87■□□□□ 0.13
TREX1-205ENST00000625293 HINT2Q9BX68 163 aa15.87■□□□□ 0.13
TREX1-205ENST00000625293 MAP1LC3BQ9GZQ8 125 aa15.87■□□□□ 0.13
TREX1-205ENST00000625293 UBTD1Q9HAC8 227 aa15.87■□□□□ 0.13
TREX1-205ENST00000625293 LSM4Q9Y4Z0 139 aaKnown RBP15.87■□□□□ 0.13
TREX1-205ENST00000625293 SOX15O60248 233 aa15.87■□□□□ 0.13
TREX1-205ENST00000625293 OPN1MWP04001 364 aa15.87■□□□□ 0.13
TREX1-205ENST00000625293 OPN1MW2P0DN77 364 aa15.87■□□□□ 0.13
TREX1-205ENST00000625293 OPN1MW3P0DN78 364 aa15.87■□□□□ 0.13
TREX1-205ENST00000625293 KRTAP10-9P60411 292 aa15.87■□□□□ 0.13
TREX1-205ENST00000625293 PRB3Q04118 309 aaPredicted RBP15.87■□□□□ 0.13
TREX1-205ENST00000625293 ARSJQ5FYB0 599 aaPredicted RBP15.87■□□□□ 0.13
TREX1-205ENST00000625293 CTXND1A0A1B0GTU2 59 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 hCG_1809904A0A1W2PP81 198 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 A0A1W2PPE2 198 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 A0A1W2PR64 198 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 A0A1W2PRV1 198 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 FNDC10F2Z333 226 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 LY6LH3BQJ8 138 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 FGF8P55075 233 aaPredicted RBP15.86■□□□□ 0.13
TREX1-205ENST00000625293 MRGPRG-AS1Q2M3A8 158 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 C2orf83Q53S99 150 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 OR10G4Q8NGN3 311 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 OR10G9Q8NGN4 311 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 OR10G7Q8NGN6 311 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 RITA1Q96K30 269 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 MGST2Q99735 147 aa15.86■□□□□ 0.13
TREX1-205ENST00000625293 OR13C7P0DN81 318 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 LGALS7P47929 136 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 OR1L8Q8NGR8 309 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 SSBP3Q9BWW4 388 aaPredicted RBP15.85■□□□□ 0.13
TREX1-205ENST00000625293 SLC39A9Q9NUM3 307 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 GNG13Q9P2W3 67 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 ONECUT1Q9UBC0 465 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 IGHV1-3A0A0C4DH29 117 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 SMCO3A2RU48 225 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 CGB1A6NKQ9 187 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 M0R1W7 72 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 NDUFS7O75251 213 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 RNASE2P10153 161 aaKnown RBP15.85■□□□□ 0.13
TREX1-205ENST00000625293 BCL2P10415 239 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 COX7A1P24310 79 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 OPRK1P41145 380 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 RXFP4Q8TDU9 374 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 GGTLC1Q9BX51 225 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 COMMD5Q9GZQ3 224 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 NPVFQ9HCQ7 196 aa15.85■□□□□ 0.13
TREX1-205ENST00000625293 LOC105371242A0A075B767 164 aa15.84■□□□□ 0.13
TREX1-205ENST00000625293 SEC14L6B5MCN3 397 aa15.84■□□□□ 0.13
TREX1-205ENST00000625293 E7EUB6 86 aa15.84■□□□□ 0.13
TREX1-205ENST00000625293 EIF3GO75821 320 aaKnown RBP eCLIP15.84■□□□□ 0.13
TREX1-205ENST00000625293 GPR6P46095 362 aaPredicted RBP15.84■□□□□ 0.13
TREX1-205ENST00000625293 ACOT6Q3I5F7 207 aaPredicted RBP15.84■□□□□ 0.13
TREX1-205ENST00000625293 VMA21Q3ZAQ7 101 aa15.84■□□□□ 0.13
TREX1-205ENST00000625293 CBLN2Q8IUK8 224 aa15.84■□□□□ 0.13
TREX1-205ENST00000625293 ACTR3CQ9C0K3 210 aaPredicted RBP15.84■□□□□ 0.13
TREX1-205ENST00000625293 ZNF430Q9H8G1 570 aaPredicted RBP15.84■□□□□ 0.13
TREX1-205ENST00000625293 SLC25A22Q9H936 323 aa15.84■□□□□ 0.13
TREX1-205ENST00000625293 AMMECR1Q9Y4X0 333 aaPredicted RBP15.84■□□□□ 0.13
TREX1-205ENST00000625293 TEX15Q9BXT5 2789 aa15.83■□□□□ 0.12
TREX1-205ENST00000625293 IGHV3-72A0A0B4J1Y9 119 aa15.83■□□□□ 0.12
TREX1-205ENST00000625293 TSPAN4O14817 238 aa15.83■□□□□ 0.12
TREX1-205ENST00000625293 YIF1AO95070 293 aa15.83■□□□□ 0.12
TREX1-205ENST00000625293 CRYGBP07316 175 aa15.83■□□□□ 0.12
TREX1-205ENST00000625293 EFNA4P52798 201 aa15.83■□□□□ 0.12
TREX1-205ENST00000625293 SOHLH1Q5JUK2 328 aa15.83■□□□□ 0.12
TREX1-205ENST00000625293 TMEM88Q6PEY1 159 aa15.83■□□□□ 0.12
TREX1-205ENST00000625293 PNKDQ8N490 385 aa15.83■□□□□ 0.12
TREX1-205ENST00000625293 OR11H6Q8NGC7 330 aa15.83■□□□□ 0.12
TREX1-205ENST00000625293 OR10W1Q8NGF6 305 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms