RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 FAM25GB3EWG6 89 aa15.49■□□□□ 0.07
SMC6-210ENST00000621152 FGF2P09038 288 aa15.49■□□□□ 0.07
SMC6-210ENST00000621152 CD81P60033 236 aa15.49■□□□□ 0.07
SMC6-210ENST00000621152 NEURL2Q9BR09 285 aa15.49■□□□□ 0.07
SMC6-210ENST00000621152 NAA50Q9GZZ1 169 aaKnown RBP15.49■□□□□ 0.07
SMC6-210ENST00000621152 SLC2A8Q9NY64 477 aa15.49■□□□□ 0.07
SMC6-210ENST00000621152 CYB5BO43169 146 aa15.48■□□□□ 0.07
SMC6-210ENST00000621152 TPPPO94811 219 aa15.48■□□□□ 0.07
SMC6-210ENST00000621152 SERPINE2P07093 398 aa15.48■□□□□ 0.07
SMC6-210ENST00000621152 PTBP1P26599 531 aaKnown RBP eCLIP15.48■□□□□ 0.078e-15■■■■■ 36.6
SMC6-210ENST00000621152 S100GP29377 79 aa15.48■□□□□ 0.07
SMC6-210ENST00000621152 RCVRNP35243 200 aa15.48■□□□□ 0.07
SMC6-210ENST00000621152 WT1-ASQ06250 92 aa15.48■□□□□ 0.07
SMC6-210ENST00000621152 THOC7Q6I9Y2 204 aaKnown RBP15.48■□□□□ 0.07
SMC6-210ENST00000621152 HSD17B13Q7Z5P4 300 aaPredicted RBP15.48■□□□□ 0.07
SMC6-210ENST00000621152 LAX1Q8IWV1 398 aa15.48■□□□□ 0.07
SMC6-210ENST00000621152 UXS1Q8NBZ7 420 aa15.48■□□□□ 0.07
SMC6-210ENST00000621152 ZNF502Q8TBZ5 544 aa15.48■□□□□ 0.07
SMC6-210ENST00000621152 CACNG8Q8WXS5 425 aa15.48■□□□□ 0.07
SMC6-210ENST00000621152 PLEKHA3Q9HB20 300 aa15.48■□□□□ 0.07
SMC6-210ENST00000621152 NDUFA4L2Q9NRX3 87 aa15.48■□□□□ 0.07
SMC6-210ENST00000621152 OR51B2Q9Y5P1 312 aa15.48■□□□□ 0.07
SMC6-210ENST00000621152 HUWE1Q7Z6Z7 4374 aaKnown RBP15.47■□□□□ 0.07
SMC6-210ENST00000621152 CD7P09564 240 aa15.47■□□□□ 0.07
SMC6-210ENST00000621152 GPR183P32249 361 aa15.47■□□□□ 0.07
SMC6-210ENST00000621152 CTF1Q16619 201 aa15.47■□□□□ 0.07
SMC6-210ENST00000621152 TM4SF20Q53R12 229 aa15.47■□□□□ 0.07
SMC6-210ENST00000621152 PLET1Q6UQ28 207 aa15.47■□□□□ 0.07
SMC6-210ENST00000621152 CADM3Q8N126 398 aa15.47■□□□□ 0.07
SMC6-210ENST00000621152 GDPD1Q8N9F7 314 aa15.47■□□□□ 0.07
SMC6-210ENST00000621152 WDR89Q96FK6 387 aaPredicted RBP15.47■□□□□ 0.07
SMC6-210ENST00000621152 CITED4Q96RK1 184 aa15.47■□□□□ 0.07
SMC6-210ENST00000621152 SPATA25Q9BR10 227 aa15.47■□□□□ 0.07
SMC6-210ENST00000621152 IGHV3-35A0A0C4DH35 117 aa15.46■□□□□ 0.07
SMC6-210ENST00000621152 TMEM213A2RRL7 107 aa15.46■□□□□ 0.07
SMC6-210ENST00000621152 ZNF182P17025 639 aaPredicted RBP15.46■□□□□ 0.07
SMC6-210ENST00000621152 UCP3P55916 312 aa15.46■□□□□ 0.07
SMC6-210ENST00000621152 RNASE12Q5GAN4 147 aaKnown RBP15.46■□□□□ 0.07
SMC6-210ENST00000621152 GPR107Q5VW38 600 aa15.46■□□□□ 0.07
SMC6-210ENST00000621152 TBC1D26Q86UD7 250 aa15.46■□□□□ 0.07
SMC6-210ENST00000621152 VN1R17PQ8TDU5 208 aa15.46■□□□□ 0.07
SMC6-210ENST00000621152 FKBP11Q9NYL4 201 aa15.46■□□□□ 0.07
SMC6-210ENST00000621152 PRNDQ9UKY0 176 aa15.46■□□□□ 0.07
SMC6-210ENST00000621152 OR11H12B2RN74 326 aa15.45■□□□□ 0.06
SMC6-210ENST00000621152 M0QYG6 137 aa15.45■□□□□ 0.06
SMC6-210ENST00000621152 SMIM18P0DKX4 95 aa15.45■□□□□ 0.06
SMC6-210ENST00000621152 LYL1P12980 280 aa15.45■□□□□ 0.06
SMC6-210ENST00000621152 CASC10Q5T4H9 136 aa15.45■□□□□ 0.06
SMC6-210ENST00000621152 ZNF57Q68EA5 555 aaPredicted RBP15.45■□□□□ 0.06
SMC6-210ENST00000621152 UNQ9165/PRO28630Q6UXU0 137 aa15.45■□□□□ 0.06
SMC6-210ENST00000621152 DEFB125Q8N687 156 aa15.45■□□□□ 0.06
SMC6-210ENST00000621152 AP3S1Q92572 193 aa15.45■□□□□ 0.06
SMC6-210ENST00000621152 PALMDQ9NP74 551 aa15.45■□□□□ 0.06
SMC6-210ENST00000621152 IGHV3-21A0A0B4J1V1 117 aa15.44■□□□□ 0.06
SMC6-210ENST00000621152 GABARAPO95166 117 aa15.44■□□□□ 0.06
SMC6-210ENST00000621152 IFNA6P05013 189 aa15.44■□□□□ 0.06
SMC6-210ENST00000621152 MFAP2P55001 183 aa15.44■□□□□ 0.06
SMC6-210ENST00000621152 LINC00322Q6ZN03 302 aaPredicted RBP15.44■□□□□ 0.06
SMC6-210ENST00000621152 SLC38A6Q8IZM9 456 aa15.44■□□□□ 0.06
SMC6-210ENST00000621152 LSM10Q969L4 123 aaKnown RBP15.44■□□□□ 0.06
SMC6-210ENST00000621152 TMEM56Q96MV1 263 aa15.44■□□□□ 0.06
SMC6-210ENST00000621152 FAM212BQ9NTI7 297 aaPredicted RBP15.44■□□□□ 0.06
SMC6-210ENST00000621152 KLK11Q9UBX7 282 aa15.44■□□□□ 0.06
SMC6-210ENST00000621152 MLXQ9UH92 298 aa15.44■□□□□ 0.06
SMC6-210ENST00000621152 F11RQ9Y624 299 aaKnown RBP15.44■□□□□ 0.06
SMC6-210ENST00000621152 NBEAL2Q6ZNJ1 2754 aa15.43■□□□□ 0.06
SMC6-210ENST00000621152 DBX1A6NMT0 343 aa15.43■□□□□ 0.06
SMC6-210ENST00000621152 A8MWP6 167 aa15.43■□□□□ 0.06
SMC6-210ENST00000621152 TGOLN2O43493 480 aa15.43■□□□□ 0.06
SMC6-210ENST00000621152 TMEM61Q8N0U2 210 aa15.43■□□□□ 0.06
SMC6-210ENST00000621152 TSC22D3Q99576 134 aa15.43■□□□□ 0.06
SMC6-210ENST00000621152 EXTL2Q9UBQ6 330 aa15.43■□□□□ 0.06
SMC6-210ENST00000621152 CEPT1Q9Y6K0 416 aa15.43■□□□□ 0.06
SMC6-210ENST00000621152 RBMY1BA6NDE4 496 aaKnown RBP15.42■□□□□ 0.06
SMC6-210ENST00000621152 RBMY1EA6NEQ0 496 aaKnown RBP15.42■□□□□ 0.06
SMC6-210ENST00000621152 OR2T8A6NH00 312 aa15.42■□□□□ 0.06
SMC6-210ENST00000621152 RBMY1DP0C7P1 496 aaKnown RBP15.42■□□□□ 0.06
SMC6-210ENST00000621152 H2BFWTQ7Z2G1 175 aa15.42■□□□□ 0.06
SMC6-210ENST00000621152 OR5B3Q8NH48 314 aa15.42■□□□□ 0.06
SMC6-210ENST00000621152 OR52I2Q8NH67 350 aa15.42■□□□□ 0.06
SMC6-210ENST00000621152 OR4A16Q8NH70 328 aa15.42■□□□□ 0.06
SMC6-210ENST00000621152 SCARB1Q8WTV0 552 aa15.42■□□□□ 0.06
SMC6-210ENST00000621152 SEC22AQ96IW7 307 aa15.42■□□□□ 0.06
SMC6-210ENST00000621152 WFDC10AQ9H1F0 79 aa15.42■□□□□ 0.06
SMC6-210ENST00000621152 EDA2RQ9HAV5 297 aa15.42■□□□□ 0.06
SMC6-210ENST00000621152 TMEM14BQ9NUH8 114 aa15.42■□□□□ 0.06
SMC6-210ENST00000621152 MRPL27Q9P0M9 148 aaKnown RBP15.42■□□□□ 0.06
SMC6-210ENST00000621152 UFC1Q9Y3C8 167 aa15.42■□□□□ 0.06
SMC6-210ENST00000621152 SCAF4O95104 1147 aaKnown RBP15.41■□□□□ 0.06
SMC6-210ENST00000621152 IGKV1-39P01597 117 aa15.41■□□□□ 0.06
SMC6-210ENST00000621152 IGKV1D-39P04432 117 aa15.41■□□□□ 0.06
SMC6-210ENST00000621152 C8orf88P0DMB2 117 aa15.41■□□□□ 0.06
SMC6-210ENST00000621152 PGAM2P15259 253 aa15.41■□□□□ 0.06
SMC6-210ENST00000621152 ELLP55199 621 aaPredicted RBP15.41■□□□□ 0.06
SMC6-210ENST00000621152 RNASE10Q5GAN6 216 aaKnown RBP15.41■□□□□ 0.06
SMC6-210ENST00000621152 BTNL8Q6UX41 500 aa15.41■□□□□ 0.06
SMC6-210ENST00000621152 SLC16A13Q7RTY0 426 aa15.41■□□□□ 0.06
SMC6-210ENST00000621152 MARC2Q969Z3 335 aa15.41■□□□□ 0.06
SMC6-210ENST00000621152 ABHD1Q96SE0 405 aa15.41■□□□□ 0.06
SMC6-210ENST00000621152 ZNF436Q9C0F3 470 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms