RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 OR4C13Q8NGP0 309 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 CMTM2Q8TAZ6 248 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 LINC00312Q9Y6C7 94 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 REV3LO60673 3130 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 SPTAN1Q13813 2472 aaKnown RBP7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 LAMA1P25391 3075 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 YLPM1P49750 1951 aaKnown RBP7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 TRAV3A0A0B4J244 114 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 OR10J4P0C629 311 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 CCL3L1P16619 93 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 SRP14P37108 136 aaKnown RBP7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 FAM90A2PQ658T7 463 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 OR1L4Q8NGR5 311 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 OR52E5Q8NH55 327 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 ONECUT1Q9UBC0 465 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 RNF24Q9Y225 148 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 FCN1O00602 326 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 APELAP0DMC3 54 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 GCHFRP30047 84 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 DMRTA1Q5VZB9 504 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 TREML4Q6UXN2 200 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 OR5B3Q8NH48 314 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 RNF2Q99496 336 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 NABP2Q9BQ15 211 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 PARD6GQ9BYG4 376 aaPredicted RBP7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 SRD5A3Q9H8P0 318 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 TMEM106BQ9NUM4 274 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 A0A1B0GWJ7 208 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 C15orf62A8K5M9 175 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 C1QTNF9BB2RNN3 333 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 SLC25A17O43808 307 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 CIDEAO60543 219 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 IGFBP2P18065 325 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 HOXA5P20719 270 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 USF1P22415 310 aaPredicted RBP7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 MC5RP33032 325 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 PQLC2Q6ZP29 291 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 OR4X1Q8NH49 305 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 OSR1Q8TAX0 266 aaPredicted RBP7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 DKK4Q9UBT3 224 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 WASHC3Q9Y3C0 194 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 DMRT1Q9Y5R6 373 aa7.62□□□□□ -1.19
RBFOX1-223ENST00000620507 ABCA1O95477 2261 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 PPIHO43447 177 aaKnown RBP7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 DAZAP2Q15038 168 aaPredicted RBP7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 ZNF726P1Q15940 193 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 IFI27L2Q9H2X8 130 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 TMEM242Q9NWH2 141 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 NAT8BQ9UHF3 227 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 F2RL2O00254 374 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 HIST1H2BKO60814 126 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 HIST1H2BJP06899 126 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 HIST1H2BOP23527 126 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 HIST1H2BBP33778 126 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 HIST1H2BDP58876 126 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 HIST1H2BCP62807 126 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 MEF2CQ06413 473 aaPredicted RBP7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 HIST2H2BEQ16778 126 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 RPEL1Q2QD12 228 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 IGFL3Q6UXB1 125 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 C1QL4Q86Z23 238 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 HIST1H2BHQ93079 126 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 TMEM186Q96B77 213 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 HIST1H2BNQ99877 126 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 HIST1H2BMQ99879 126 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 C11orf1Q9H5F2 150 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 RPUSD1Q9UJJ7 312 aaKnown RBP7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 C15orf65H3BRN8 121 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 IGLV2-14P01704 120 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 WNT2P09544 360 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 LINC00869P0C866 280 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 CD81P60033 236 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 RELBQ01201 579 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 C10orf113Q5VZT2 155 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 OR9G1Q8NH87 305 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 BLNKQ8WV28 456 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 FAM215AQ9Y5M1 114 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 NCKAP5O14513 1909 aa7.61□□□□□ -1.19
RBFOX1-223ENST00000620507 FAM157AC9JC47 383 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 DLL1O00548 723 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 CCL21O00585 134 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 IGHV3-48P01763 117 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 DDTP30046 118 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 ATP5IP56385 69 aaPredicted RBP7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 DOLPP1Q86YN1 238 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 OR1B1Q8NGR6 318 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 MRPL20Q9BYC9 149 aaKnown RBP7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 ZNF835Q9Y2P0 537 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 IGHV1-69-2A0A0G2JMI3 117 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 HSBP1L1C9JCN9 74 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 GFRA3O60609 400 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 SNRPCP09234 159 aaKnown RBP7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 CFHR2P36980 270 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 TCL1AP56279 114 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 REC114Q7Z4M0 266 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 GGTLC1Q9BX51 225 aa7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 SEBOXQ9HB31 216 aaPredicted RBP7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 TIMM8BQ9Y5J9 83 aaPredicted RBP7.6□□□□□ -1.19
RBFOX1-223ENST00000620507 UPK2O00526 184 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms