RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 CBLN2Q8IUK8 224 aa17.42■□□□□ 0.38
SGMS1-210ENST00000619438 C22orf15Q8WYQ4 148 aa17.42■□□□□ 0.38
SGMS1-210ENST00000619438 TMEM158Q8WZ71 300 aa17.42■□□□□ 0.38
SGMS1-210ENST00000619438 CEBPZOSA8MTT3 80 aa17.42■□□□□ 0.38
SGMS1-210ENST00000619438 RBMXL2O75526 392 aaKnown RBP17.42■□□□□ 0.38
SGMS1-210ENST00000619438 HSPB1P04792 205 aaKnown RBP17.42■□□□□ 0.38
SGMS1-210ENST00000619438 SRSF2Q01130 221 aaKnown RBP17.42■□□□□ 0.38
SGMS1-210ENST00000619438 PMS2P11Q13670 270 aa17.42■□□□□ 0.38
SGMS1-210ENST00000619438 TMEM41BQ5BJD5 291 aa17.42■□□□□ 0.38
SGMS1-210ENST00000619438 PRAMEF5Q5TYX0 476 aa17.42■□□□□ 0.38
SGMS1-210ENST00000619438 OR8G2PQ6IF36 304 aa17.42■□□□□ 0.38
SGMS1-210ENST00000619438 ZDHHC16Q969W1 377 aa17.42■□□□□ 0.38
SGMS1-210ENST00000619438 QTRT1Q9BXR0 403 aaKnown RBP17.42■□□□□ 0.38
SGMS1-210ENST00000619438 SAA2-SAA4A0A096LPE2 208 aa17.41■□□□□ 0.38
SGMS1-210ENST00000619438 ARG1P05089 322 aa17.41■□□□□ 0.38
SGMS1-210ENST00000619438 SAA2P0DJI9 122 aaPredicted RBP17.41■□□□□ 0.38
SGMS1-210ENST00000619438 POU2AF1Q16633 256 aa17.41■□□□□ 0.38
SGMS1-210ENST00000619438 SLC25A48Q6ZT89 311 aaKnown RBP17.41■□□□□ 0.38
SGMS1-210ENST00000619438 ZNF429Q86V71 674 aa17.41■□□□□ 0.38
SGMS1-210ENST00000619438 OR4A16Q8NH70 328 aa17.41■□□□□ 0.38
SGMS1-210ENST00000619438 H1FXQ92522 213 aaKnown RBP17.41■□□□□ 0.38
SGMS1-210ENST00000619438 RARRES2Q99969 163 aa17.41■□□□□ 0.38
SGMS1-210ENST00000619438 PCGF1Q9BSM1 259 aa17.41■□□□□ 0.38
SGMS1-210ENST00000619438 UBE2L5PA0A1B0GUS4 154 aa17.4■□□□□ 0.38
SGMS1-210ENST00000619438 PPIAL4GP0DN37 164 aa17.4■□□□□ 0.38
SGMS1-210ENST00000619438 NDUFB7P17568 137 aa17.4■□□□□ 0.38
SGMS1-210ENST00000619438 MDKP21741 143 aaPredicted RBP17.4■□□□□ 0.38
SGMS1-210ENST00000619438 RELBQ01201 579 aa17.4■□□□□ 0.38
SGMS1-210ENST00000619438 KHDC3LQ587J8 217 aa17.4■□□□□ 0.38
SGMS1-210ENST00000619438 OR10G4Q8NGN3 311 aa17.4■□□□□ 0.38
SGMS1-210ENST00000619438 GAL3ST2Q9H3Q3 398 aa17.4■□□□□ 0.38
SGMS1-210ENST00000619438 SMCO4Q9NRQ5 59 aa17.4■□□□□ 0.38
SGMS1-210ENST00000619438 SLC25A10Q9UBX3 287 aaPredicted RBP17.4■□□□□ 0.38
SGMS1-210ENST00000619438 A0A1B0GV50 99 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 NFYBP25208 207 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 ARF6P62330 175 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 RPP30P78346 268 aaKnown RBP17.39■□□□□ 0.37
SGMS1-210ENST00000619438 ICAM4Q14773 271 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 UTF1Q5T230 341 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 DNHD1Q96M86 4753 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 IGHV3OR16-10A0A075B7F0 116 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 C15orf62A8K5M9 175 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 FCN3O75636 299 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 TOX4O94842 621 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 SRP19P09132 144 aaKnown RBP17.39■□□□□ 0.37
SGMS1-210ENST00000619438 ZNF726P1Q15940 193 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 KLF17Q5JT82 389 aaPredicted RBP17.39■□□□□ 0.37
SGMS1-210ENST00000619438 SOHLH1Q5JUK2 328 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 LEAP2Q969E1 77 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 RCC1LQ96I51 464 aaKnown RBP17.39■□□□□ 0.37
SGMS1-210ENST00000619438 TUBA4BQ9H853 241 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 TMEM140Q9NV12 185 aa17.39■□□□□ 0.37
SGMS1-210ENST00000619438 FSHBP01225 129 aa17.38■□□□□ 0.37
SGMS1-210ENST00000619438 IFNA17P01571 189 aa17.38■□□□□ 0.37
SGMS1-210ENST00000619438 IGHV3-7P01780 117 aa17.38■□□□□ 0.37
SGMS1-210ENST00000619438 MBP02144 154 aa17.38■□□□□ 0.37
SGMS1-210ENST00000619438 VDAC2P45880 294 aaPredicted RBP17.38■□□□□ 0.37
SGMS1-210ENST00000619438 RHEBQ15382 184 aa17.38■□□□□ 0.37
SGMS1-210ENST00000619438 RBMS3Q6XE24 437 aaKnown RBP17.38■□□□□ 0.37
SGMS1-210ENST00000619438 CLCC1Q96S66 551 aa17.38■□□□□ 0.37
SGMS1-210ENST00000619438 GGACTQ9BVM4 153 aa17.38■□□□□ 0.37
SGMS1-210ENST00000619438 LOC102723971A0A1B0GUV8 181 aa17.37■□□□□ 0.37
SGMS1-210ENST00000619438 OR2B8PP59922 312 aa17.37■□□□□ 0.37
SGMS1-210ENST00000619438 AWAT1Q58HT5 328 aa17.37■□□□□ 0.37
SGMS1-210ENST00000619438 HEPN1Q6WQI6 88 aa17.37■□□□□ 0.37
SGMS1-210ENST00000619438 LYG1Q8N1E2 194 aa17.37■□□□□ 0.37
SGMS1-210ENST00000619438 ZNF383Q8NA42 475 aa17.37■□□□□ 0.37
SGMS1-210ENST00000619438 VSIRQ9H7M9 311 aa17.37■□□□□ 0.37
SGMS1-210ENST00000619438 TRAV40A0A0B4J280 105 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 H7C2Y5 167 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 SOX15O60248 233 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 IGHV4-38-2P0DP08 117 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 RPL31P62899 125 aaKnown RBP17.36■□□□□ 0.37
SGMS1-210ENST00000619438 JMJD8Q96S16 334 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 ONECUT1Q9UBC0 465 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 FOXA2Q9Y261 457 aaPredicted RBP17.36■□□□□ 0.37
SGMS1-210ENST00000619438 A0A1W2PPE3 182 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 C7orf77A4D0Y5 90 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 C15orf61A6NNL5 157 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 MMP23AO75900 390 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 HRASP01112 189 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 OR13C7P0DN81 318 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 HAGHQ16775 308 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 C15orf54Q8N8G6 183 aa17.36■□□□□ 0.37
SGMS1-210ENST00000619438 IL6RP08887 468 aaPredicted RBP17.35■□□□□ 0.37
SGMS1-210ENST00000619438 FGF7P21781 194 aa17.35■□□□□ 0.37
SGMS1-210ENST00000619438 FLI1Q01543 452 aaPredicted RBP17.35■□□□□ 0.37
SGMS1-210ENST00000619438 SSX9Q7RTT3 188 aa17.35■□□□□ 0.37
SGMS1-210ENST00000619438 C8orf31Q8N9H6 132 aa17.35■□□□□ 0.37
SGMS1-210ENST00000619438 RHOVQ96L33 236 aa17.35■□□□□ 0.37
SGMS1-210ENST00000619438 AIFM2Q9BRQ8 373 aa17.35■□□□□ 0.37
SGMS1-210ENST00000619438 TMEM14BQ9NUH8 114 aa17.35■□□□□ 0.37
SGMS1-210ENST00000619438 VENTXO95231 258 aa17.34■□□□□ 0.37
SGMS1-210ENST00000619438 KRTAP24-1Q3LI83 254 aa17.34■□□□□ 0.37
SGMS1-210ENST00000619438 ZNF833PQ6ZTB9 187 aa17.34■□□□□ 0.37
SGMS1-210ENST00000619438 BCL6BQ8N143 479 aaPredicted RBP17.34■□□□□ 0.37
SGMS1-210ENST00000619438 LY6G5BQ8NDX9 201 aa17.34■□□□□ 0.37
SGMS1-210ENST00000619438 ZNF714Q96N38 554 aa17.34■□□□□ 0.37
SGMS1-210ENST00000619438 TCF19Q9Y242 345 aa17.34■□□□□ 0.37
SGMS1-210ENST00000619438 WDR83OSQ9Y284 106 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms