RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 A0A1B0GW64 132 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 C15orf61A6NNL5 157 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 C1QTNF9P0C862 333 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 CHRNB4P30926 498 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 VDAC2P45880 294 aaPredicted RBP10.13□□□□□ -0.79
CIITA-212ENST00000618207 GNB2P62879 340 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 MUC15Q8N387 334 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 OR5T1Q8NG75 326 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 OR10W1Q8NGF6 305 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 MBD3L1Q8WWY6 194 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 OR51B2Q9Y5P1 312 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 J3QR06 171 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 PAX6P26367 422 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 CA7P43166 264 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 MAP1AP78559 2803 aaPredicted RBP10.13□□□□□ -0.79
CIITA-212ENST00000618207 MLANAQ16655 118 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 RTL8BQ17RB0 113 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 PDLIM3Q53GG5 364 aaPredicted RBP10.13□□□□□ -0.79
CIITA-212ENST00000618207 TREML4Q6UXN2 200 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 TMEM204Q9BSN7 226 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 ITPR1Q14643 2758 aa10.13□□□□□ -0.79
CIITA-212ENST00000618207 CA2P00918 260 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 HRASP01112 189 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 SAA1P0DJI8 122 aaPredicted RBP10.12□□□□□ -0.79
CIITA-212ENST00000618207 KIR2DS2P43631 304 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 HABP2Q14520 560 aaPredicted RBP10.12□□□□□ -0.79
CIITA-212ENST00000618207 FAM90A2PQ658T7 463 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 CORO2AQ92828 525 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 HARBI1Q96MB7 349 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 CACNA1BQ00975 2339 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 TRAV1-1A0A0B4J248 108 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 PAGE4O60829 102 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 IGHV3-48P01763 117 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 APELAP0DMC3 54 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 NPY1RP25929 384 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 LOXP28300 417 aaPredicted RBP10.12□□□□□ -0.79
CIITA-212ENST00000618207 HSPE1P61604 102 aaKnown RBP10.12□□□□□ -0.79
CIITA-212ENST00000618207 FABP9Q0Z7S8 132 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 RHEBQ15382 184 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 HEPN1Q6WQI6 88 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 C15orf54Q8N8G6 183 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 SLC24A4Q8NFF2 622 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 OR4F5Q8NH21 305 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 TVP23CQ96ET8 276 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 OR4F4Q96R69 305 aa10.12□□□□□ -0.79
CIITA-212ENST00000618207 C1orf196B1AJZ1 125 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 ENSAO43768 121 aaKnown RBP10.11□□□□□ -0.79
CIITA-212ENST00000618207 CDC34P49427 236 aaPredicted RBP10.11□□□□□ -0.79
CIITA-212ENST00000618207 KLRB1Q12918 225 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 C10orf55Q5SWW7 151 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 ACTR3CQ9C0K3 210 aaPredicted RBP10.11□□□□□ -0.79
CIITA-212ENST00000618207 VAX2Q9UIW0 290 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 CTXND1A0A1B0GTU2 59 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 A0A1W2PPV4 95 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 C17orf112F2Z3M2 114 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 FOLR2P14207 255 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 DDTP30046 118 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 ADORA2A-AS1P86434 159 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.11□□□□□ -0.79
CIITA-212ENST00000618207 SMDT1Q9H4I9 107 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 AURKAIP1Q9NWT8 199 aaPredicted RBP10.11□□□□□ -0.79
CIITA-212ENST00000618207 WDR83OSQ9Y284 106 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 PKD1L2Q7Z442 2459 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 GATA2P23769 480 aaPredicted RBP10.11□□□□□ -0.79
CIITA-212ENST00000618207 CD81P60033 236 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 ARSJQ5FYB0 599 aaPredicted RBP10.11□□□□□ -0.79
CIITA-212ENST00000618207 CST9LP1Q5W188 147 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 Q8N7P7 452 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 ADTRPQ96IZ2 230 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 MGST2Q99735 147 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 PLEKHA3Q9HB20 300 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 TMEM14BQ9NUH8 114 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 TIMM9Q9Y5J7 89 aa10.11□□□□□ -0.79
CIITA-212ENST00000618207 SPG11Q96JI7 2443 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 B9A039 149 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 E7EUB6 86 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 ITGB1BP1O14713 200 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 ACTL6BO94805 426 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 RPS10P46783 165 aaKnown RBP10.1□□□□□ -0.79
CIITA-212ENST00000618207 MEF2BQ02080 365 aaPredicted RBP10.1□□□□□ -0.79
CIITA-212ENST00000618207 CLEC12BQ2HXU8 276 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 IGFBPL1Q8WX77 278 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 SMIM7Q9BQ49 75 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 GOLT1BQ9Y3E0 138 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 PXMP4Q9Y6I8 212 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 A0A087X0M5 115 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 A0A1B0GX30 115 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 CYB5BO43169 146 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 IFNA1P01562 189 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 APOA2P02652 100 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 MT-ND4LP03901 98 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 PSMB3P49720 205 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 UCNP55089 124 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 MEF2CQ06413 473 aaPredicted RBP10.1□□□□□ -0.79
CIITA-212ENST00000618207 ADIRFQ15847 76 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 ACOT6Q3I5F7 207 aaPredicted RBP10.1□□□□□ -0.79
CIITA-212ENST00000618207 OR51G1Q8NGK1 321 aa10.1□□□□□ -0.79
CIITA-212ENST00000618207 PARD6GQ9BYG4 376 aaPredicted RBP10.1□□□□□ -0.79
CIITA-212ENST00000618207 IGFBP2P18065 325 aa10.09□□□□□ -0.79
CIITA-212ENST00000618207 RAB5AP20339 215 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms