RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 HSD17B13Q7Z5P4 300 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 TMEM217Q8N7C4 229 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 LINC01356Q8N9X3 169 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 MMP26Q9NRE1 261 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 YAE1D1Q9NRH1 226 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 C1RLQ9NZP8 487 aa13.53□□□□□ -0.24
TRAPPC3-210ENST00000617904 DOCK11Q5JSL3 2073 aa13.52□□□□□ -0.24
TRAPPC3-210ENST00000617904 J3QLI3 93 aa13.52□□□□□ -0.25
TRAPPC3-210ENST00000617904 TIMM23O14925 209 aa13.52□□□□□ -0.25
TRAPPC3-210ENST00000617904 CFDP00746 253 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC3-210ENST00000617904 IL6RP08887 468 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC3-210ENST00000617904 METTL15P1P0C7V9 234 aa13.52□□□□□ -0.25
TRAPPC3-210ENST00000617904 FAM106CPP0CH98 169 aa13.52□□□□□ -0.25
TRAPPC3-210ENST00000617904 LOXL1Q08397 574 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC3-210ENST00000617904 SLC38A11Q08AI6 406 aa13.52□□□□□ -0.25
TRAPPC3-210ENST00000617904 DIAPH2-AS1Q14236 149 aa13.52□□□□□ -0.25
TRAPPC3-210ENST00000617904 HES1Q14469 280 aa13.52□□□□□ -0.25
TRAPPC3-210ENST00000617904 TMEM14EPQ6UXP3 125 aa13.52□□□□□ -0.25
TRAPPC3-210ENST00000617904 GGACTQ9BVM4 153 aa13.52□□□□□ -0.25
TRAPPC3-210ENST00000617904 IGHV3-72A0A0B4J1Y9 119 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 A0A1W2PPI3 338 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 NPFFO15130 113 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 SLC25A17O43808 307 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 SOX15O60248 233 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 TMEM50AO95807 157 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 IFNA4P05014 189 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 SNRNP70P08621 437 aaKnown RBP13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 BLOC1S1P78537 153 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 SSX2Q16385 188 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 OR8G2PQ6IF36 304 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 SLC24A4Q8NFF2 622 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 ZDHHC16Q969W1 377 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 TBX15Q96SF7 602 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 GINS3Q9BRX5 216 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 TMEM147Q9BVK8 224 aa13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 PARD6GQ9BYG4 376 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 METTL1Q9UBP6 276 aaKnown RBP13.51□□□□□ -0.25
TRAPPC3-210ENST00000617904 MALRD1Q5VYJ5 2156 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 TRAV3A0A0B4J244 114 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 TEX50A0A1B0GTY4 177 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 A0A1W2PRD5 423 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 A0A1W2PRF3 423 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 A0A1W2PRM7 423 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 SRRM4A7MD48 611 aaKnown RBP13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 UMAD1C9J7I0 102 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 VENTXO95231 258 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 NPY1RP25929 384 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 COMPP49747 757 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 HABP2Q14520 560 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 HCP5Q6MZN7 132 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 ZNF709Q8N972 641 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 C1orf159Q96HA4 380 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 C7orf69Q9H7B7 122 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 UQCC1Q9NVA1 299 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 CUBNO60494 3623 aa13.5□□□□□ -0.25
TRAPPC3-210ENST00000617904 C17orf112F2Z3M2 114 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 INS-IGF2F8WCM5 200 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 NBR2O15453 112 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 VDAC2P45880 294 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 DLX1P56177 255 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 BPIFB3P59826 476 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 PSG5Q15238 335 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 MMDQ15546 238 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 ETV3LQ6ZN32 361 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 PPP1R27Q86WC6 154 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 THNSL2Q86YJ6 484 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 TEX29Q8N6K0 151 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 TMED6Q8WW62 240 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 SAT2Q96F10 170 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 SRSF8Q9BRL6 282 aaKnown RBP13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 ARV1Q9H2C2 271 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 KCNIP2Q9NS61 270 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 FAM96BQ9Y3D0 163 aa13.49□□□□□ -0.25
TRAPPC3-210ENST00000617904 IGHV1-69DA0A0B4J2H0 117 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 NUDT19A8MXV4 375 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 TEX46H3BTG2 121 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 TRIM77I1YAP6 450 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 RRHO14718 337 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 CYB5BO43169 146 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 MPDU1O75352 247 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 IGKV1D-33P01593 117 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 IGKV1-33P01594 117 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 IGHV1-69P01742 117 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 PRH1P02810 166 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 S100A1P23297 94 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 RPL27AP46776 148 aaKnown RBP13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 RAB2AP61019 212 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 TNXAQ16473 311 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 SPINK9Q5DT21 86 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 HSD17B11Q8NBQ5 300 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 FBXO7Q9Y3I1 522 aa13.48□□□□□ -0.25
TRAPPC3-210ENST00000617904 LINC00862A6NCI5 91 aa13.47□□□□□ -0.25
TRAPPC3-210ENST00000617904 FBXO24O75426 580 aa13.47□□□□□ -0.25
TRAPPC3-210ENST00000617904 CNIH1O95406 144 aa13.47□□□□□ -0.25
TRAPPC3-210ENST00000617904 IGLV2-23P01705 113 aa13.47□□□□□ -0.25
TRAPPC3-210ENST00000617904 TMEM11P17152 192 aa13.47□□□□□ -0.25
TRAPPC3-210ENST00000617904 SAA4P35542 130 aa13.47□□□□□ -0.25
TRAPPC3-210ENST00000617904 PRB3Q04118 309 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC3-210ENST00000617904 RAB31Q13636 194 aa13.47□□□□□ -0.25
TRAPPC3-210ENST00000617904 PRSS8Q16651 343 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms