RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 NSG2Q9Y328 171 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 H0Y980 276 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 HIST1H2BKO60814 126 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 HIST1H2BJP06899 126 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 RD3LP0DJH9 198 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 HIST1H2BOP23527 126 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 HIST1H2BBP33778 126 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 HIST1H2BDP58876 126 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 S100A10P60903 97 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 HIST1H2BCP62807 126 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 ELOBQ15370 118 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 HIST2H2BEQ16778 126 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 ZNF585BQ52M93 769 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.17□□□□□ -0.3
SNAP47-213ENST00000617596 ZNF66Q6ZN08 573 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 CD300LFQ8TDQ1 290 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 HIST1H2BHQ93079 126 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 HSD17B10Q99714 261 aaKnown RBP13.17□□□□□ -0.3
SNAP47-213ENST00000617596 HIST1H2BNQ99877 126 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 HIST1H2BMQ99879 126 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 GAB2Q9UQC2 676 aa13.17□□□□□ -0.3
SNAP47-213ENST00000617596 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.16□□□□□ -0.31e-7■■■□□ 16.8
SNAP47-213ENST00000617596 CENPVL3A0A0U1RRI6 287 aa13.16□□□□□ -0.3
SNAP47-213ENST00000617596 ODF3BA8MYP8 253 aa13.16□□□□□ -0.3
SNAP47-213ENST00000617596 FCGR3BO75015 233 aa13.16□□□□□ -0.3
SNAP47-213ENST00000617596 FGF7P21781 194 aa13.16□□□□□ -0.3
SNAP47-213ENST00000617596 GAMTQ14353 236 aa13.16□□□□□ -0.3
SNAP47-213ENST00000617596 LIAT1Q6ZQX7 453 aa13.16□□□□□ -0.3
SNAP47-213ENST00000617596 LYZL2Q7Z4W2 148 aa13.16□□□□□ -0.3
SNAP47-213ENST00000617596 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.16□□□□□ -0.3
SNAP47-213ENST00000617596 FAM216AQ8WUB2 273 aa13.16□□□□□ -0.3
SNAP47-213ENST00000617596 RHOVQ96L33 236 aa13.16□□□□□ -0.3
SNAP47-213ENST00000617596 NDUFAF3Q9BU61 184 aa13.16□□□□□ -0.3
SNAP47-213ENST00000617596 TMEM242Q9NWH2 141 aa13.16□□□□□ -0.3
SNAP47-213ENST00000617596 HILPDAQ9Y5L2 63 aa13.16□□□□□ -0.3
SNAP47-213ENST00000617596 MYO9AB2RTY4 2548 aa13.16□□□□□ -0.3
SNAP47-213ENST00000617596 FLNAP21333 2647 aaKnown RBP13.16□□□□□ -0.3
SNAP47-213ENST00000617596 IGHV3-72A0A0B4J1Y9 119 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 TRAV40A0A0B4J280 105 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 GPR137BO60478 399 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 NHLH2Q02577 135 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 CATR1Q13166 79 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 MSMO1Q15800 293 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 KHDC3LQ587J8 217 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 RUSC1-AS1Q66K80 236 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 FAM219AQ8IW50 185 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 OR10G4Q8NGN3 311 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 C20orf24Q9BUV8 137 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 LIN7CQ9NUP9 197 aaKnown RBP13.15□□□□□ -0.3
SNAP47-213ENST00000617596 CSPG4Q6UVK1 2322 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 TCAPO15273 167 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 IFNA21P01568 189 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 IGKV1-39P01597 117 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 IGKV1D-39P04432 117 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 SERPINE2P07093 398 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 IGHV4-38-2P0DP08 117 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 UCP1P25874 307 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 NUTF2P61970 127 aaKnown RBP13.15□□□□□ -0.3
SNAP47-213ENST00000617596 ZNF616Q08AN1 781 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 IAH1Q2TAA2 248 aaPredicted RBP13.15□□□□□ -0.3
SNAP47-213ENST00000617596 SLC35E3Q7Z769 313 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 TGIF2LXQ8IUE1 241 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 DYNAPQ8N1N2 210 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 SLC35G3Q8N808 338 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 DDB2Q92466 427 aa13.15□□□□□ -0.3
SNAP47-213ENST00000617596 ACTR3CQ9C0K3 210 aaPredicted RBP13.15□□□□□ -0.3
SNAP47-213ENST00000617596 ABCA1O95477 2261 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 RNF212BA8MTL3 300 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 A8MWP6 167 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 LY6LH3BQJ8 138 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 S1PR2O95136 353 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 CDS2O95674 445 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 HTR1DP28221 377 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 ZNF137PP52743 207 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 JOSD1Q15040 202 aaPredicted RBP13.14□□□□□ -0.31
SNAP47-213ENST00000617596 ZNF674Q2M3X9 581 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 BRD3OSQ6XYD6 125 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 ZNF695Q8IW36 515 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 SELENOHQ8IZQ5 122 aaKnown RBP13.14□□□□□ -0.31
SNAP47-213ENST00000617596 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 RPEQ96AT9 228 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 SOX21Q9Y651 276 aaPredicted RBP13.14□□□□□ -0.31
SNAP47-213ENST00000617596 TEX15Q9BXT5 2789 aa13.14□□□□□ -0.31
SNAP47-213ENST00000617596 IGKV1-16P04430 117 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 IL3RAP26951 378 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 UBE2E1P51965 193 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 IZUMO4Q1ZYL8 232 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 MRPL52Q86TS9 123 aaKnown RBP13.13□□□□□ -0.31
SNAP47-213ENST00000617596 LGI3Q8N145 548 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 TMEM56Q96MV1 263 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 NABP2Q9BQ15 211 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 KIAA1456Q9P272 454 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 DPM3Q9P2X0 92 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 PITPNC1Q9UKF7 332 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 TMEM56-RWDD3S4R434 201 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 HSPB1P04792 205 aaKnown RBP13.13□□□□□ -0.31
SNAP47-213ENST00000617596 SAA4P35542 130 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 THBS3P49746 956 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 LGALS4P56470 323 aa13.13□□□□□ -0.31
SNAP47-213ENST00000617596 CDPF1Q6NVV7 123 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms