RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.85□□□□□ -1.31
GPC6-202ENST00000617456 LDLRAD2Q5SZI1 272 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 ACOT7LQ6ZUV0 252 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 SLC25A26Q70HW3 274 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 RTN4RL2Q86UN3 420 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 TMEM183AQ8IXX5 376 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 KCNRGQ8N5I3 272 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 WFDC9Q8NEX5 89 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 OR2AK2Q8NG84 335 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 OR52L2PQ8NGH6 319 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 OR51S1Q8NGJ8 323 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 OR5D14Q8NGL3 314 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 OR10X1Q8NGY0 326 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 PIFOQ8TCI5 191 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 HIST1H2BHQ93079 126 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 FAM46BQ96A09 425 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 RNF166Q96A37 237 aaPredicted RBP6.85□□□□□ -1.31
GPC6-202ENST00000617456 MOB3AQ96BX8 217 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 MRAP2Q96G30 205 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 ZNF714Q96N38 554 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 HIST1H2BNQ99877 126 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 HIST1H2BMQ99879 126 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 CNOT2Q9NZN8 540 aaKnown RBP6.85□□□□□ -1.31
GPC6-202ENST00000617456 FRRS1LQ9P0K9 344 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 RNF150Q9ULK6 438 aa6.85□□□□□ -1.31
GPC6-202ENST00000617456 IGKV1-27A0A075B6S5 117 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 A0A087WWC5 75 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 IGKV1-9A0A0C4DH69 117 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 C7orf77A4D0Y5 90 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 TMEM212A6NML5 194 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 SH2D1BO14796 132 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 RBFOX2O43251 390 aaKnown RBP eCLIP6.84□□□□□ -1.31
GPC6-202ENST00000617456 ENTPD6O75354 484 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 TUSC2O75896 110 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 HAND1O96004 215 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 IGHA1P01876 353 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 OR5H8P0DN80 308 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 AREGP15514 252 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 ZNF20P17024 532 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 ATF1P18846 271 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 F2RP25116 425 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 CHATP28329 748 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 VDAC2P45880 294 aaPredicted RBP6.84□□□□□ -1.31
GPC6-202ENST00000617456 INPP1P49441 399 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 BAXQ07812 192 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 FAM71F2Q6NXP2 309 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 Q6ZS46 218 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 C16orf82Q7Z2V1 217 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 ZNF546Q86UE3 836 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 RPS4Y2Q8TD47 263 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 EMG1Q92979 244 aaKnown RBP6.84□□□□□ -1.31
GPC6-202ENST00000617456 ZNF488Q96MN9 340 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 TBX5Q99593 518 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 B9D2Q9BPU9 175 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 RSG1Q9BU20 258 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 TTTY10Q9BZA0 68 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 PRSS22Q9GZN4 317 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 RBKSQ9H477 322 aa6.84□□□□□ -1.31
GPC6-202ENST00000617456 ZNF230Q9UIE0 474 aaPredicted RBP6.84□□□□□ -1.31
GPC6-202ENST00000617456 TCRBV4S1A1TA0A5B7 111 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 A6NIN4 97 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 OR4C45A6NMZ5 311 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 FAM90A22PA8MWA6 464 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 OOSP1A8MZH6 123 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 F8VVB4 439 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 F8VWA3 439 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 M0R129 80 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 SIVA1O15304 175 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 OR7C2O60412 319 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 MT-ND4P03905 459 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 PIPP12273 146 aaPredicted RBP6.83□□□□□ -1.32
GPC6-202ENST00000617456 FABP4P15090 132 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 CCL3L1P16619 93 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 CD34P28906 385 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 OR10J1P30954 320 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 OR12D2P58182 307 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 POU2AF1Q16633 256 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 TP53I3Q53FA7 332 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 DMRTC1Q5HYR2 192 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 GCSAMLQ5JQS6 135 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 KHDC1LQ5JSQ8 128 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 ASCL4Q6XD76 172 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 BOD1L2Q8IYS8 172 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 LINC00528Q8N1L1 170 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 DYNAPQ8N1N2 210 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 OR5AU1Q8NGC0 362 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 OR4A4PQ8NGN8 299 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 CNIH3Q8TBE1 160 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 WIPF2Q8TF74 440 aaPredicted RBP6.83□□□□□ -1.32
GPC6-202ENST00000617456 PTH2Q96A98 100 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 FGGYQ96C11 551 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 ADAT3Q96EY9 351 aaPredicted RBP6.83□□□□□ -1.32
GPC6-202ENST00000617456 PELI1Q96FA3 418 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 WNT10AQ9GZT5 417 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 TMEM133Q9H2Q1 129 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 NAT8Q9UHE5 227 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 TCF19Q9Y242 345 aa6.83□□□□□ -1.32
GPC6-202ENST00000617456 RPL36Q9Y3U8 105 aaKnown RBP6.83□□□□□ -1.32
GPC6-202ENST00000617456 TRGV10A0A0A0MS01 117 aa6.82□□□□□ -1.32
GPC6-202ENST00000617456 IRGMA1A4Y4 181 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms