RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 LINC00469Q8N7U9 141 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 HIST1H1DP16402 221 aaKnown RBP2.79□□□□□ -1.96
LPP-220ENST00000617246 HOXC5Q00444 222 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 PHLDA2Q53GA4 152 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 CFAP77Q6ZQR2 320 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 RARRES2Q99969 163 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 ALOX5APP20292 161 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 TBPL2Q6SJ96 375 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 Q6ZNX1 250 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 OR4X1Q8NH49 305 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 NRG4Q8WWG1 115 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 C16orf74Q96GX8 76 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 BCL7BQ9BQE9 202 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 NSG2Q9Y328 171 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 C7orf66A4D0T2 115 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 IGKV3-20P01619 116 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 SEC11AP67812 179 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 RHOHQ15669 191 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 MBD6Q96DN6 1003 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 NPVFQ9HCQ7 196 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 TRAV21A0A0B4J279 112 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 PPP6CO00743 305 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 IGHV2-5P01817 119 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 RND2P52198 227 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 ELOA3CA0A087WX78 387 aaPredicted RBP2.79□□□□□ -1.96
LPP-220ENST00000617246 LOC102723971A0A1B0GUV8 181 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 C5orf63A6NC05 138 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 A6NIN4 97 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 C3orf84H3BNL1 204 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 HYPMO75409 117 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 ELLP55199 621 aaPredicted RBP2.79□□□□□ -1.96
LPP-220ENST00000617246 SDHDO14521 159 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 SIGLEC5O15389 551 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 PMP2P02689 132 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 LGALS1P09382 135 aaKnown RBP2.79□□□□□ -1.96
LPP-220ENST00000617246 RBM11P57052 281 aaKnown RBP2.79□□□□□ -1.96
LPP-220ENST00000617246 Q0VG73 95 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 TRAV6A0A075B6T7 132 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 ZNF207O43670 478 aaKnown RBP2.79□□□□□ -1.96
LPP-220ENST00000617246 MYPOPQ86VE0 399 aaPredicted RBP2.79□□□□□ -1.96
LPP-220ENST00000617246 ZNF439Q8NDP4 499 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 C21orf62Q9NYP8 219 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 PIFOQ8TCI5 191 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 SMIM6P0DI80 62 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 IAPPP10997 89 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 TPTE2P1Q5T6R2 138 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 TIRAPP58753 221 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 S100A14Q9HCY8 104 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 BET1LQ9NYM9 111 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 LPAR6P43657 344 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 HIST2H3AQ71DI3 136 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 RHOVQ96L33 236 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 CTDSP1Q9GZU7 261 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 CST9LQ9H4G1 147 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 TMEM218A2RU14 115 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 TMEM233B4DJY2 109 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 APELAP0DMC3 54 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 VWC2Q2TAL6 325 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 B9D2Q9BPU9 175 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 BABAM2Q9NXR7 383 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 ATP5LO75964 103 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 RD3LP0DJH9 198 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 CNTFRP26992 372 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 GNG4P50150 75 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 PHYHIPLQ96FC7 376 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 PLA2G12AQ9BZM1 189 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 BANF2Q9H503 90 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 CLCF1Q9UBD9 225 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 SVILO95425 2214 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 ADARB2-AS1A8MUL3 147 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 TWIST1Q15672 202 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 FAM89BQ8N5H3 189 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 FAM169BQ8N8A8 192 aa2.79□□□□□ -1.96
LPP-220ENST00000617246 URB1O60287 2271 aaKnown RBP2.78□□□□□ -1.96
LPP-220ENST00000617246 IGHV2-26A0A0B4J1V2 119 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 TRAV1-1A0A0B4J248 108 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 OR2H2O95918 312 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 ERGP11308 486 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 SAPCD1Q5SSQ6 148 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 SCGB1D4Q6XE38 83 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 C4orf3Q8WVX3 66 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 FAM3DQ96BQ1 224 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 CTAG2O75638 210 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 ZFP36P26651 326 aaKnown RBP2.78□□□□□ -1.96
LPP-220ENST00000617246 MED9Q9NWA0 146 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 SOD3P08294 240 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 TDGF1P3P51864 188 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 FBXL15Q9H469 300 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 OR2W1Q9Y3N9 320 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 SEC16AO15027 2179 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 TMEM14DPA8MWL7 114 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 SPNP16150 400 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 RASL11AQ6T310 242 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 MAPK1IP1LQ8NDC0 245 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 OR13C6PQ8NH95 151 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 GATAD1Q8WUU5 269 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 MAP1LC3AQ9H492 121 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 Q9N2K0 584 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 HCFC1P51610 2035 aa2.78□□□□□ -1.96
LPP-220ENST00000617246 C3orf85A0A1B0GTC6 90 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms