RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 LYNX1P0DP58 116 aa12.82□□□□□ -0.36
SEMA3B-212ENST00000616701 ELOBQ15370 118 aa12.82□□□□□ -0.36
SEMA3B-212ENST00000616701 CR1LQ2VPA4 569 aa12.82□□□□□ -0.36
SEMA3B-212ENST00000616701 SPTBN1Q01082 2364 aaKnown RBP12.82□□□□□ -0.36
SEMA3B-212ENST00000616701 LOC105371242A0A075B767 164 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 P0C879 139 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 CCL3L1P16619 93 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 MSMO1Q15800 293 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 COL5A1-AS1Q5SY13 56 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 NGBQ9NPG2 151 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 CCL20P78556 96 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 ERASQ7Z444 233 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 H1FXQ92522 213 aaKnown RBP12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 QTRT1Q9BXR0 403 aaKnown RBP12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 SLC25A10Q9UBX3 287 aaPredicted RBP12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 DCHS2Q6V1P9 2916 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 SAA2-SAA4A0A096LPE2 208 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 PIGBOS1A0A0B4J2F0 54 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 HPRT1P00492 218 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 SAA2P0DJI9 122 aaPredicted RBP12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 TEX36Q5VZQ5 186 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 OR4C12Q96R67 309 aa12.81□□□□□ -0.36
SEMA3B-212ENST00000616701 PPIAL4EA0A075B759 164 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 TRAV3A0A0B4J244 114 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 CEBPZOSA8MTT3 80 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 PPIAL4DF5H284 164 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 TMEM178BH3BS89 294 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 K7EP13 123 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 CD3EP07766 207 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 PPIAL4FP0DN26 164 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 TMEM106BQ9NUM4 274 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 HSPB7Q9UBY9 170 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 IFNA5P01569 189 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 PPBPP02775 128 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 ELLP55199 621 aaPredicted RBP12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 PMS2P11Q13670 270 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 COMMD1Q8N668 190 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 SLC35B3Q9H1N7 401 aa12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 POLR3KQ9Y2Y1 108 aaPredicted RBP12.8□□□□□ -0.36
SEMA3B-212ENST00000616701 UBE2G2P60604 165 aa12.79□□□□□ -0.36
SEMA3B-212ENST00000616701 ADORA2A-AS1P86434 159 aa12.79□□□□□ -0.36
SEMA3B-212ENST00000616701 ZNF525Q8N782 197 aa12.79□□□□□ -0.36
SEMA3B-212ENST00000616701 VSIRQ9H7M9 311 aa12.79□□□□□ -0.36
SEMA3B-212ENST00000616701 IDI2-AS1Q9NZ38 188 aa12.79□□□□□ -0.36
SEMA3B-212ENST00000616701 CISD1Q9NZ45 108 aaKnown RBP12.79□□□□□ -0.36
SEMA3B-212ENST00000616701 TRAV38-1A0A0B4J264 116 aa12.79□□□□□ -0.36
SEMA3B-212ENST00000616701 UBE2L5PA0A1B0GUS4 154 aa12.79□□□□□ -0.36
SEMA3B-212ENST00000616701 VSTM5A8MXK1 200 aa12.79□□□□□ -0.36
SEMA3B-212ENST00000616701 RAB29O14966 203 aa12.79□□□□□ -0.36
SEMA3B-212ENST00000616701 RPL31P62899 125 aaKnown RBP12.79□□□□□ -0.36
SEMA3B-212ENST00000616701 S1PR3Q99500 378 aa12.79□□□□□ -0.36
SEMA3B-212ENST00000616701 PIEZO1Q92508 2521 aa12.79□□□□□ -0.36
SEMA3B-212ENST00000616701 IQCJQ1A5X6 159 aa12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 ST6GALNAC3Q8NDV1 305 aa12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 ITPR1Q14643 2758 aa12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 F6UZH7 168 aa12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 GCGP01275 180 aa12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 PRB3Q04118 309 aaPredicted RBP12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 SLC38A11Q08AI6 406 aa12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 C1orf194Q5T5A4 169 aa12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 SCGB1C1Q8TD33 95 aa12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 RARRES2Q99969 163 aa12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 PITPNC1Q9UKF7 332 aa12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 STRAPQ9Y3F4 350 aaKnown RBP12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 TAS2R30P59541 319 aa12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 SOHLH1Q5JUK2 328 aa12.78□□□□□ -0.36
SEMA3B-212ENST00000616701 CD33P20138 364 aa12.77□□□□□ -0.36
SEMA3B-212ENST00000616701 APOBEC3AP31941 199 aaPredicted RBP12.77□□□□□ -0.36
SEMA3B-212ENST00000616701 MMDQ15546 238 aa12.77□□□□□ -0.36
SEMA3B-212ENST00000616701 TMEM183AQ8IXX5 376 aa12.77□□□□□ -0.36
SEMA3B-212ENST00000616701 CTSZQ9UBR2 303 aa12.77□□□□□ -0.36
SEMA3B-212ENST00000616701 SERTM2A0A1B0GWG4 89 aa12.77□□□□□ -0.37
SEMA3B-212ENST00000616701 hADV38S2A0JD32 116 aa12.77□□□□□ -0.37
SEMA3B-212ENST00000616701 C1orf87Q8N0U7 546 aa12.77□□□□□ -0.37
SEMA3B-212ENST00000616701 GNPNAT1Q96EK6 184 aaPredicted RBP12.77□□□□□ -0.37
SEMA3B-212ENST00000616701 PBDC1Q9BVG4 233 aa12.77□□□□□ -0.37
SEMA3B-212ENST00000616701 FAM90A26D6RGX4 464 aa12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 MYOD1P15172 320 aa12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 DLX1P56177 255 aa12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 HBG1P69891 147 aa12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 HBG2P69892 147 aa12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 SLC35E1Q96K37 410 aa12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 TET2Q6N021 2002 aaPredicted RBP12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 LY6HO94772 140 aa12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 TDRG1Q3Y452 100 aa12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 TMEM200BQ69YZ2 307 aa12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 TMEM14EPQ6UXP3 125 aa12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 OR4A16Q8NH70 328 aa12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 RAB39BQ96DA2 213 aa12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 PAM16Q9Y3D7 125 aa12.76□□□□□ -0.37
SEMA3B-212ENST00000616701 REG1BP48304 166 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 HAGHQ16775 308 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 SPSB3Q6PJ21 355 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 ZNF439Q8NDP4 499 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 TMEM140Q9NV12 185 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 TACC2O95359 2948 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 NDUFB8O95169 186 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 UBE2V1Q13404 147 aa12.75□□□□□ -0.37
SEMA3B-212ENST00000616701 GBGT1Q8N5D6 347 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms