RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 HIST1H2BDP58876 126 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 HIST1H2BCP62807 126 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 CCL20P78556 96 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 ZNF117Q03924 483 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 RHEBQ15382 184 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 HIST2H2BEQ16778 126 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.91□□□□□ -1.94
RFC3-203ENST00000616236 CLDND2Q8NHS1 167 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 HIST1H2BHQ93079 126 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 GPER1Q99527 375 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 HIST1H2BNQ99877 126 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 HIST1H2BMQ99879 126 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 SH3BGRL3Q9H299 93 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 LYRM2Q9NU23 88 aaPredicted RBP2.91□□□□□ -1.94
RFC3-203ENST00000616236 SSR3Q9UNL2 185 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 HEY1Q9Y5J3 304 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 R4GN34 69 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 NACADO15069 1562 aa2.91□□□□□ -1.94
RFC3-203ENST00000616236 NEO1Q92859 1461 aa2.9□□□□□ -1.94
RFC3-203ENST00000616236 TRPM6Q9BX84 2022 aa2.9□□□□□ -1.94
RFC3-203ENST00000616236 NID2Q14112 1375 aa2.9□□□□□ -1.94
RFC3-203ENST00000616236 A0A1B0GVY2 172 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 VPS37CA5D8V6 355 aaPredicted RBP2.9□□□□□ -1.95
RFC3-203ENST00000616236 LRCOL1A6NCL2 159 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 SIGLEC16A6NMB1 481 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 H7C1C5 153 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 UBFD1O14562 309 aaKnown RBP2.9□□□□□ -1.95
RFC3-203ENST00000616236 LEPROTO15243 131 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 NDUFC2O95298 119 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 PRM2P04554 102 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 LGALS1P09382 135 aaKnown RBP2.9□□□□□ -1.95
RFC3-203ENST00000616236 CD200P41217 278 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 FXYD7P58549 80 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 LINC00315P59091 139 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 RPS11P62280 158 aaKnown RBP eCLIP2.9□□□□□ -1.95
RFC3-203ENST00000616236 LCN6P62502 163 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 SARNPP82979 210 aaKnown RBP2.9□□□□□ -1.95
RFC3-203ENST00000616236 AADACL3Q5VUY0 350 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 Q6Q795 121 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 ZNF439Q8NDP4 499 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 ZNF675Q8TD23 568 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 H1FXQ92522 213 aaKnown RBP2.9□□□□□ -1.95
RFC3-203ENST00000616236 OR8B2Q96RD0 313 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 PBDC1Q9BVG4 233 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 BATF3Q9NR55 127 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 ACER3Q9NUN7 267 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 TVP23BQ9NYZ1 205 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 FHAD1B1AJZ9 1412 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 PLXNB1O43157 2135 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 ZNF106Q9H2Y7 1883 aaKnown RBP2.9□□□□□ -1.95
RFC3-203ENST00000616236 PRRC2AP48634 2157 aaKnown RBP2.9□□□□□ -1.95
RFC3-203ENST00000616236 CACNA1DQ01668 2161 aa2.9□□□□□ -1.95
RFC3-203ENST00000616236 GGT3PA6NGU5 568 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 TXNDC9O14530 226 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 NBEAP1P0C6P0 100 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 GLRXP35754 106 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 NUP160Q12769 1436 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 ZNF141Q15928 474 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 AMMECR1LQ6DCA0 310 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 RPL22L1Q6P5R6 122 aaKnown RBP2.89□□□□□ -1.95
RFC3-203ENST00000616236 SPATA31E1Q6ZUB1 1445 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 PHF13Q86YI8 300 aaPredicted RBP2.89□□□□□ -1.95
RFC3-203ENST00000616236 MSRB3Q8IXL7 192 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 C1orf64Q8NEQ6 169 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 OR13C4Q8NGS5 318 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 SMCR5Q8TEV8 140 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 CAPZA3Q96KX2 299 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 LINC00167Q96N53 147 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 MIEN1Q9BRT3 115 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 ZNF2Q9BSG1 426 aaPredicted RBP2.89□□□□□ -1.95
RFC3-203ENST00000616236 DERL1Q9BUN8 251 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 SHANK3Q9BYB0 1731 aa2.89□□□□□ -1.95
RFC3-203ENST00000616236 NYNRINQ9P2P1 1898 aaKnown RBP2.89□□□□□ -1.95
RFC3-203ENST00000616236 YTHDC2Q9H6S0 1430 aaKnown RBP2.88□□□□□ -1.95
RFC3-203ENST00000616236 TRBV19A0A075B6N1 114 aa2.88□□□□□ -1.95
RFC3-203ENST00000616236 IGHV3-15A0A0B4J1V0 119 aa2.88□□□□□ -1.95
RFC3-203ENST00000616236 FUOMA2VDF0 154 aa2.88□□□□□ -1.95
RFC3-203ENST00000616236 TSTD3H0UI37 97 aa2.88□□□□□ -1.95
RFC3-203ENST00000616236 TP53I11O14683 189 aa2.88□□□□□ -1.95
RFC3-203ENST00000616236 CPSF4O95639 269 aaKnown RBP2.88□□□□□ -1.95
RFC3-203ENST00000616236 NPYP01303 97 aa2.88□□□□□ -1.95
RFC3-203ENST00000616236 HLA-DMBP28068 263 aa2.88□□□□□ -1.95
RFC3-203ENST00000616236 XCL1P47992 114 aa2.88□□□□□ -1.95
RFC3-203ENST00000616236 GABRA4P48169 554 aa2.88□□□□□ -1.95
RFC3-203ENST00000616236 KRTAP10-9P60411 292 aa2.88□□□□□ -1.95
RFC3-203ENST00000616236 FLI1Q01543 452 aaPredicted RBP2.88□□□□□ -1.95
RFC3-203ENST00000616236 EXOC3-AS1Q8N2X6 119 aa2.88□□□□□ -1.95
RFC3-203ENST00000616236 FGF13Q92913 245 aa2.88□□□□□ -1.95
RFC3-203ENST00000616236 XAGE1AQ9HD64 81 aa2.88□□□□□ -1.95
RFC3-203ENST00000616236 GPR179Q6PRD1 2367 aa2.87□□□□□ -1.95
RFC3-203ENST00000616236 TRAV41A0A0B4J266 112 aa2.87□□□□□ -1.95
RFC3-203ENST00000616236 MAP1LC3B2A6NCE7 125 aa2.87□□□□□ -1.95
RFC3-203ENST00000616236 J3QRK9 145 aa2.87□□□□□ -1.95
RFC3-203ENST00000616236 OR2J2O76002 312 aa2.87□□□□□ -1.95
RFC3-203ENST00000616236 CDS2O95674 445 aa2.87□□□□□ -1.95
RFC3-203ENST00000616236 IFNA10P01566 189 aa2.87□□□□□ -1.95
RFC3-203ENST00000616236 IFNA7P01567 189 aa2.87□□□□□ -1.95
RFC3-203ENST00000616236 TFPTP0C1Z6 253 aa2.87□□□□□ -1.95
RFC3-203ENST00000616236 COL8A2P25067 703 aa2.87□□□□□ -1.95
RFC3-203ENST00000616236 CA5AP35218 305 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms