RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 HINT1P49773 126 aaPredicted RBP4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 CAMPP49913 170 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 RND2P52198 227 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 SLC35B1P78383 322 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 TFF3Q07654 80 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 MORN2Q502X0 79 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 Q6ZR03 302 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 WDR86Q86TI4 376 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 FAM90A1Q86YD7 464 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 MDFIQ99750 246 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 SFXN3Q9BWM7 321 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 PRO3102Q9H379 93 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 PLA2G2EQ9NZK7 142 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 TIMM9Q9Y5J7 89 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 INSIG2Q9Y5U4 225 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 GCN1Q92616 2671 aaKnown RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 A0A087WWC5 75 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 A0A1W2PNU3 283 aaPredicted RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 PGPEP1LA6NFU8 196 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 YPEL1O60688 119 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 VENTXO95231 258 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 PLAUP00749 431 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 HOXA5P20719 270 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 MFAP2P55001 183 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 RTP5Q14D33 572 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 TOMM20LQ6UXN7 152 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 ABHD17AQ96GS6 310 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 YPEL2Q96QA6 119 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 C2orf16Q68DN1 1984 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 C1QTNF9BB2RNN3 333 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 GYPAP02724 150 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 CCL3L1P16619 93 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 PAX6P26367 422 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 KIR2DS2P43631 304 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 C1orf185Q5T7R7 199 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 MRPL54Q6P161 138 aaKnown RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 C16orf82Q7Z2V1 217 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 NPIPB3Q92617 1050 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 QTRT1Q9BXR0 403 aaKnown RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 RPL27AP46776 148 aaKnown RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 RPL23P62829 140 aaKnown RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 GAMTQ14353 236 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 FAM90A2PQ658T7 463 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 TEP1Q99973 2627 aaKnown RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 CA2P00918 260 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 GATA2P23769 480 aaPredicted RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 S100A4P26447 101 aaKnown RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 OSR1Q8TAX0 266 aaPredicted RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 MRPL37Q9BZE1 423 aaKnown RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 LTBP2Q14767 1821 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 A0A087X0M5 115 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 IGHV1-18A0A0C4DH31 117 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 A0A1B0GX30 115 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 A0A1W2PRD5 423 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 A0A1W2PRF3 423 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 A0A1W2PRM7 423 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 FAM90A27PA6NNH2 459 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 SNURFLB1AK76 121 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 FAM157AC9JC47 383 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 TOX4O94842 621 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 CT45A10P0DMU9 189 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 RANP62826 216 aaKnown RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 LCN2P80188 198 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 OR4A47Q6IF82 309 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 HCP5Q6MZN7 132 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 ZNF474Q6S9Z5 364 aaPredicted RBP4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 Q6ZN92 141 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 OR5AU1Q8NGC0 362 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 OR4X1Q8NH49 305 aa4.69□□□□□ -1.66
SYNCRIP-204ENST00000616122 CRYBB3P26998 211 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 IQCJQ1A5X6 159 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 PLA2G2CQ5R387 149 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 Q6ZPA2 131 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 Q6ZS92 163 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 TMEM144Q7Z5S9 345 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 S100A7AQ86SG5 101 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 MMD2Q8IY49 270 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 STXBP6Q8NFX7 210 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 RAB1CQ92928 201 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 ZNF714Q96N38 554 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 PAM16Q9Y3D7 125 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 OR51B2Q9Y5P1 312 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 ARHGAP21Q5T5U3 1957 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 NDUFA2O43678 99 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 WISP2O76076 250 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 CXCL1P09341 107 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 C8orf88P0DMB2 117 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 MC5RP33032 325 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 IER3P46695 156 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 ATP5G3P48201 142 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 ATP5IP56385 69 aaPredicted RBP4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 ELOBQ15370 118 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 MMDQ15546 238 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 COX19Q49B96 90 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 TREML4Q6UXN2 200 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 STPG3Q8N7X2 389 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 OR9G1Q8NH87 305 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 LYPD6BQ8NI32 183 aa4.68□□□□□ -1.66
SYNCRIP-204ENST00000616122 SLC25A15Q9Y619 301 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms