RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 RORCP51449 518 aa17.16■□□□□ 0.34
FAM228B-208ENST00000613899 CASC10Q5T4H9 136 aa17.16■□□□□ 0.34
FAM228B-208ENST00000613899 OR10W1Q8NGF6 305 aa17.16■□□□□ 0.34
FAM228B-208ENST00000613899 ZNF502Q8TBZ5 544 aa17.16■□□□□ 0.34
FAM228B-208ENST00000613899 LSM10Q969L4 123 aaKnown RBP17.16■□□□□ 0.34
FAM228B-208ENST00000613899 PLEKHA3Q9HB20 300 aa17.16■□□□□ 0.34
FAM228B-208ENST00000613899 TEX50A0A1B0GTY4 177 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 TMEM213A2RRL7 107 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 ZNF785A8K8V0 405 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 SNAPC5O75971 98 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 OR13C7P0DN81 318 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 ELK1P19419 428 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 EDN2P20800 178 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 PTBP1P26599 531 aaKnown RBP eCLIP17.15■□□□□ 0.341e-8■■■■■ 49.5
FAM228B-208ENST00000613899 GPR183P32249 361 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 GUCA2BQ16661 112 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 ZNF585BQ52M93 769 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 PHLDA2Q53GA4 152 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 MZT2AQ6P582 158 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 VN1R17PQ8TDU5 208 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 AP3S1Q92572 193 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 ISOC1Q96CN7 298 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 TSC22D3Q99576 134 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 PALMDQ9NP74 551 aa17.15■□□□□ 0.34
FAM228B-208ENST00000613899 FAM212BQ9NTI7 297 aaPredicted RBP17.15■□□□□ 0.34
FAM228B-208ENST00000613899 HPGDSO60760 199 aa17.14■□□□□ 0.33
FAM228B-208ENST00000613899 SERPINE2P07093 398 aa17.14■□□□□ 0.33
FAM228B-208ENST00000613899 LYL1P12980 280 aa17.14■□□□□ 0.33
FAM228B-208ENST00000613899 G6PCP35575 357 aa17.14■□□□□ 0.33
FAM228B-208ENST00000613899 WT1-ASQ06250 92 aa17.14■□□□□ 0.33
FAM228B-208ENST00000613899 CACNG8Q8WXS5 425 aa17.14■□□□□ 0.33
FAM228B-208ENST00000613899 NDUFA4L2Q9NRX3 87 aa17.14■□□□□ 0.33
FAM228B-208ENST00000613899 FKBP11Q9NYL4 201 aa17.14■□□□□ 0.33
FAM228B-208ENST00000613899 PRNDQ9UKY0 176 aa17.14■□□□□ 0.33
FAM228B-208ENST00000613899 OR51B2Q9Y5P1 312 aa17.14■□□□□ 0.33
FAM228B-208ENST00000613899 CEPT1Q9Y6K0 416 aa17.14■□□□□ 0.33
FAM228B-208ENST00000613899 GABARAPO95166 117 aa17.13■□□□□ 0.33
FAM228B-208ENST00000613899 CD7P09564 240 aa17.13■□□□□ 0.33
FAM228B-208ENST00000613899 ZNF57Q68EA5 555 aaPredicted RBP17.13■□□□□ 0.33
FAM228B-208ENST00000613899 PLET1Q6UQ28 207 aa17.13■□□□□ 0.33
FAM228B-208ENST00000613899 SLC38A6Q8IZM9 456 aa17.13■□□□□ 0.33
FAM228B-208ENST00000613899 OR5B3Q8NH48 314 aa17.13■□□□□ 0.33
FAM228B-208ENST00000613899 MARC2Q969Z3 335 aa17.13■□□□□ 0.33
FAM228B-208ENST00000613899 WDR89Q96FK6 387 aaPredicted RBP17.13■□□□□ 0.33
FAM228B-208ENST00000613899 HINT2Q9BX68 163 aa17.13■□□□□ 0.33
FAM228B-208ENST00000613899 FAM25AB3EWG3 89 aa17.12■□□□□ 0.33
FAM228B-208ENST00000613899 FAM25CB3EWG5 89 aa17.12■□□□□ 0.33
FAM228B-208ENST00000613899 FAM25GB3EWG6 89 aa17.12■□□□□ 0.33
FAM228B-208ENST00000613899 IFNA6P05013 189 aa17.12■□□□□ 0.33
FAM228B-208ENST00000613899 UCP3P55916 312 aa17.12■□□□□ 0.33
FAM228B-208ENST00000613899 SLC16A13Q7RTY0 426 aa17.12■□□□□ 0.33
FAM228B-208ENST00000613899 TBC1D26Q86UD7 250 aa17.12■□□□□ 0.33
FAM228B-208ENST00000613899 UXS1Q8NBZ7 420 aa17.12■□□□□ 0.33
FAM228B-208ENST00000613899 TMEM56Q96MV1 263 aa17.12■□□□□ 0.33
FAM228B-208ENST00000613899 EDA2RQ9HAV5 297 aa17.12■□□□□ 0.33
FAM228B-208ENST00000613899 NSG2Q9Y328 171 aa17.12■□□□□ 0.33
FAM228B-208ENST00000613899 F11RQ9Y624 299 aaKnown RBP17.12■□□□□ 0.33
FAM228B-208ENST00000613899 TGOLN2O43493 480 aa17.11■□□□□ 0.33
FAM228B-208ENST00000613899 SLC25A24Q6NUK1 477 aa17.11■□□□□ 0.33
FAM228B-208ENST00000613899 UNQ9165/PRO28630Q6UXU0 137 aa17.11■□□□□ 0.33
FAM228B-208ENST00000613899 TMEM61Q8N0U2 210 aa17.11■□□□□ 0.33
FAM228B-208ENST00000613899 OR1L6Q8NGR2 347 aa17.11■□□□□ 0.33
FAM228B-208ENST00000613899 ATP6V0BQ99437 205 aa17.11■□□□□ 0.33
FAM228B-208ENST00000613899 TMEM14BQ9NUH8 114 aa17.11■□□□□ 0.33
FAM228B-208ENST00000613899 MLXQ9UH92 298 aa17.11■□□□□ 0.33
FAM228B-208ENST00000613899 UFC1Q9Y3C8 167 aa17.11■□□□□ 0.33
FAM228B-208ENST00000613899 RYR3Q15413 4870 aa17.1■□□□□ 0.33
FAM228B-208ENST00000613899 C15orf61A6NNL5 157 aa17.1■□□□□ 0.33
FAM228B-208ENST00000613899 OR11H12B2RN74 326 aa17.1■□□□□ 0.33
FAM228B-208ENST00000613899 SMIM18P0DKX4 95 aa17.1■□□□□ 0.33
FAM228B-208ENST00000613899 ELLP55199 621 aaPredicted RBP17.1■□□□□ 0.33
FAM228B-208ENST00000613899 CTF1Q16619 201 aa17.1■□□□□ 0.33
FAM228B-208ENST00000613899 LINC00322Q6ZN03 302 aaPredicted RBP17.1■□□□□ 0.33
FAM228B-208ENST00000613899 DEFB125Q8N687 156 aa17.1■□□□□ 0.33
FAM228B-208ENST00000613899 BSCL2Q96G97 398 aaPredicted RBP17.1■□□□□ 0.33
FAM228B-208ENST00000613899 ZNF436Q9C0F3 470 aaPredicted RBP17.1■□□□□ 0.33
FAM228B-208ENST00000613899 NAA50Q9GZZ1 169 aaKnown RBP17.1■□□□□ 0.33
FAM228B-208ENST00000613899 SRD5A3Q9H8P0 318 aa17.1■□□□□ 0.33
FAM228B-208ENST00000613899 ZNF182P17025 639 aaPredicted RBP17.09■□□□□ 0.33
FAM228B-208ENST00000613899 TM4SF20Q53R12 229 aa17.09■□□□□ 0.33
FAM228B-208ENST00000613899 SPSB3Q6PJ21 355 aa17.09■□□□□ 0.33
FAM228B-208ENST00000613899 BTNL8Q6UX41 500 aa17.09■□□□□ 0.33
FAM228B-208ENST00000613899 WFDC10AQ9H1F0 79 aa17.09■□□□□ 0.33
FAM228B-208ENST00000613899 MRPL27Q9P0M9 148 aaKnown RBP17.09■□□□□ 0.33
FAM228B-208ENST00000613899 M0QYG6 137 aa17.08■□□□□ 0.32
FAM228B-208ENST00000613899 C8orf88P0DMB2 117 aa17.08■□□□□ 0.32
FAM228B-208ENST00000613899 ANKRD55Q3KP44 614 aa17.08■□□□□ 0.32
FAM228B-208ENST00000613899 RNASE10Q5GAN6 216 aaKnown RBP17.08■□□□□ 0.32
FAM228B-208ENST00000613899 OR52B4Q8NGK2 314 aa17.08■□□□□ 0.32
FAM228B-208ENST00000613899 TMEM190Q8WZ59 177 aa17.08■□□□□ 0.32
FAM228B-208ENST00000613899 SEC22AQ96IW7 307 aa17.08■□□□□ 0.32
FAM228B-208ENST00000613899 C21orf62Q9NYP8 219 aa17.08■□□□□ 0.32
FAM228B-208ENST00000613899 TRAV25A0A0B4J276 109 aa17.07■□□□□ 0.32
FAM228B-208ENST00000613899 IGHV3-35A0A0C4DH35 117 aa17.07■□□□□ 0.32
FAM228B-208ENST00000613899 OR2T8A6NH00 312 aa17.07■□□□□ 0.32
FAM228B-208ENST00000613899 TBPP20226 339 aa17.07■□□□□ 0.32
FAM228B-208ENST00000613899 MFAP2P55001 183 aa17.07■□□□□ 0.32
FAM228B-208ENST00000613899 RNASE12Q5GAN4 147 aaKnown RBP17.07■□□□□ 0.32
FAM228B-208ENST00000613899 H2BFWTQ7Z2G1 175 aa17.07■□□□□ 0.32
FAM228B-208ENST00000613899 OR4A16Q8NH70 328 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms