RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 TNFRSF18Q9Y5U5 241 aa16.95■□□□□ 0.3
CTDP1-208ENST00000613122 NBEAP1P0C6P0 100 aa16.95■□□□□ 0.3
CTDP1-208ENST00000613122 LINC01587Q99440 93 aa16.95■□□□□ 0.3
CTDP1-208ENST00000613122 PSMG3Q9BT73 122 aaPredicted RBP16.95■□□□□ 0.3
CTDP1-208ENST00000613122 RARRES2Q99969 163 aa16.95■□□□□ 0.3
CTDP1-208ENST00000613122 MRPL13Q9BYD1 178 aaKnown RBP16.95■□□□□ 0.3
CTDP1-208ENST00000613122 NPIPB7O75200 414 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 IL18BPO95998 194 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 CA7P43166 264 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 PRB3Q04118 309 aaPredicted RBP16.94■□□□□ 0.3
CTDP1-208ENST00000613122 WDR82Q6UXN9 313 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 PLSCR2Q9NRY7 297 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 RBFOX2O43251 390 aaKnown RBP eCLIP16.94■□□□□ 0.38e-6■■■■□ 20.3
CTDP1-208ENST00000613122 HTN3P15516 51 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 ABCA7Q8IZY2 2146 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 RNASEH2CQ8TDP1 164 aaKnown RBP16.94■□□□□ 0.3
CTDP1-208ENST00000613122 H7C2G1 150 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 PLPPR1Q8TBJ4 325 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 COL25A1Q9BXS0 654 aaPredicted RBP16.94■□□□□ 0.3
CTDP1-208ENST00000613122 NPCDR1Q9BY65 106 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 TRBV20OR9-2A0A075B6H5 130 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 LEPROTL1O95214 131 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 IGFBP2P18065 325 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 SAMD13Q5VXD3 122 aa16.94■□□□□ 0.3
CTDP1-208ENST00000613122 HLA-DRB1P01911 266 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 SAA2-SAA4A0A096LPE2 208 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 SAA2P0DJI9 122 aaPredicted RBP16.93■□□□□ 0.3
CTDP1-208ENST00000613122 AGAP20933 346 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 TRPM7Q96QT4 1865 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 IGHV3OR16-8A0A075B7F1 116 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 A0A1B0GTI1 187 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 TBX6O95947 436 aaPredicted RBP16.93■□□□□ 0.3
CTDP1-208ENST00000613122 H2BFSP57053 126 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 C8orf46Q8TAG6 207 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 HSPB9Q9BQS6 159 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 A0A087X0M5 115 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 A0A1B0GX30 115 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 TCRBV4S1A1TA0A5B7 111 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 EMP1P54849 157 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 FOXF2Q12947 444 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 C2orf68Q2NKX9 166 aa16.93■□□□□ 0.3
CTDP1-208ENST00000613122 ZDBF2Q9HCK1 2354 aa16.92■□□□□ 0.3
CTDP1-208ENST00000613122 SIPA1L1O43166 1804 aa16.92■□□□□ 0.3
CTDP1-208ENST00000613122 YPEL1O60688 119 aa16.92■□□□□ 0.3
CTDP1-208ENST00000613122 DANCRP0C864 163 aa16.92■□□□□ 0.3
CTDP1-208ENST00000613122 SAA1P0DJI8 122 aaPredicted RBP16.92■□□□□ 0.3
CTDP1-208ENST00000613122 YPEL2Q96QA6 119 aa16.92■□□□□ 0.3
CTDP1-208ENST00000613122 M0R381 172 aa16.92■□□□□ 0.3
CTDP1-208ENST00000613122 CENPWQ5EE01 88 aa16.92■□□□□ 0.3
CTDP1-208ENST00000613122 TRAV24A0A0B4J272 114 aa16.91■□□□□ 0.3
CTDP1-208ENST00000613122 TRAV40A0A0B4J280 105 aa16.91■□□□□ 0.3
CTDP1-208ENST00000613122 PSMB11A5LHX3 300 aa16.91■□□□□ 0.3
CTDP1-208ENST00000613122 PARLQ9H300 379 aa16.91■□□□□ 0.3
CTDP1-208ENST00000613122 PRSS2P07478 247 aa16.91■□□□□ 0.3
CTDP1-208ENST00000613122 UCP1P25874 307 aa16.91■□□□□ 0.3
CTDP1-208ENST00000613122 SUMO2P61956 95 aaKnown RBP16.91■□□□□ 0.3
CTDP1-208ENST00000613122 DMRTA2Q96SC8 542 aa16.91■□□□□ 0.3
CTDP1-208ENST00000613122 STHQ8IWL8 128 aa16.91■□□□□ 0.3
CTDP1-208ENST00000613122 ANKRD36A6QL64 1941 aa16.91■□□□□ 0.3
CTDP1-208ENST00000613122 RALGAPA2Q2PPJ7 1873 aa16.91■□□□□ 0.3
CTDP1-208ENST00000613122 CACNG8Q8WXS5 425 aa16.91■□□□□ 0.3
CTDP1-208ENST00000613122 RPRMQ9NS64 109 aa16.91■□□□□ 0.3
CTDP1-208ENST00000613122 SCN2AQ99250 2005 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 IGHV1-46P01743 117 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 NMBP08949 121 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 GGCTO75223 188 aaKnown RBP16.9■□□□□ 0.3
CTDP1-208ENST00000613122 EFNA4P52798 201 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 C20orf204Q6ZNR8 217 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 OR10AG1Q8NH19 301 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 PTPRFP10586 1907 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 A0A0G2JMZ2 1700 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 LRRC37A2A6NM11 1700 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 GPX4P36969 197 aaPredicted RBP16.9■□□□□ 0.3
CTDP1-208ENST00000613122 LBHQ53QV2 105 aaPredicted RBP16.9■□□□□ 0.3
CTDP1-208ENST00000613122 TRGV2A0A075B6R0 118 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 TAS2R60P59551 318 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 OR52E5Q8NH55 327 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 RNASE1P07998 156 aaKnown RBP16.9■□□□□ 0.3
CTDP1-208ENST00000613122 RNASE4P34096 147 aaKnown RBP16.9■□□□□ 0.3
CTDP1-208ENST00000613122 NSUN5P1Q3KNT7 163 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 SFRP2Q96HF1 295 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 WFIKKN1Q96NZ8 548 aa16.9■□□□□ 0.3
CTDP1-208ENST00000613122 LDLRAD2Q5SZI1 272 aa16.89■□□□□ 0.29
CTDP1-208ENST00000613122 ZNF383Q8NA42 475 aa16.89■□□□□ 0.29
CTDP1-208ENST00000613122 MESP1Q9BRJ9 268 aa16.89■□□□□ 0.29
CTDP1-208ENST00000613122 TMEM70Q9BUB7 260 aa16.89■□□□□ 0.29
CTDP1-208ENST00000613122 PLSCR4Q9NRQ2 329 aa16.89■□□□□ 0.29
CTDP1-208ENST00000613122 CBY1Q9Y3M2 126 aa16.89■□□□□ 0.29
CTDP1-208ENST00000613122 TRGC2P03986 189 aa16.89■□□□□ 0.29
CTDP1-208ENST00000613122 SRIP30626 198 aa16.89■□□□□ 0.29
CTDP1-208ENST00000613122 OR4D5Q8NGN0 318 aa16.89■□□□□ 0.29
CTDP1-208ENST00000613122 UPK2O00526 184 aa16.89■□□□□ 0.29
CTDP1-208ENST00000613122 WNT2P09544 360 aa16.89■□□□□ 0.29
CTDP1-208ENST00000613122 CD24P25063 80 aa16.89■□□□□ 0.29
CTDP1-208ENST00000613122 ZNF672Q499Z4 452 aaPredicted RBP16.89■□□□□ 0.29
CTDP1-208ENST00000613122 PAX1P15863 534 aa16.88■□□□□ 0.29
CTDP1-208ENST00000613122 MRPS16Q9Y3D3 137 aaKnown RBP16.88■□□□□ 0.29
CTDP1-208ENST00000613122 TFF3Q07654 80 aa16.88■□□□□ 0.29
CTDP1-208ENST00000613122 ZNF25P17030 456 aaPredicted RBP16.88■□□□□ 0.29
CTDP1-208ENST00000613122 SDF2L1Q9HCN8 221 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms