RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PTGDSP41222 190 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 HSPE1P61604 102 aaKnown RBP7.52□□□□□ -1.21
TTC28-208ENST00000612946 TEX38Q6PEX7 206 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 FOXC2Q99958 501 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 CUL9Q8IWT3 2517 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 K7ESM1 405 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 TGIF1Q15583 401 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 RAB1CQ92928 201 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 SCGB3A1Q96QR1 104 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 A0A1W2PRE2 83 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 DXOO77932 396 aaKnown RBP7.52□□□□□ -1.21
TTC28-208ENST00000612946 IGKCP01834 107 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 PIGYQ3MUY2 71 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 NEU1Q99519 415 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 GDF15Q99988 308 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 ZGLP1P0C6A0 271 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 EDIL3O43854 480 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 TMEM95Q3KNT9 176 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 ADAMTSL5Q6ZMM2 481 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 OR5AN1Q8NGI8 311 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 TNFRSF19Q9NS68 423 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 LOC105371242A0A075B767 164 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 PPIAL4CA0A0B4J2A2 164 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 REG1AP05451 166 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 PPIAL4GP0DN37 164 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 PAX1P15863 534 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 GAGE5Q13069 117 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 GAGE6Q13070 117 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 TNXAQ16473 311 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 OR4D11Q8NGI4 311 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 CHTOPQ9Y3Y2 248 aaKnown RBP7.52□□□□□ -1.21
TTC28-208ENST00000612946 NEUROG3Q9Y4Z2 214 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 KIAA1549Q9HCM3 1950 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 FAM157BP0CG42 384 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 TDGF1P13385 188 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 CRYBB3P26998 211 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 SIGLEC14Q08ET2 396 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 ZNF664Q8N3J9 261 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 GGTLC3B5MD39 225 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 NKX2-8O15522 239 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 PSG1P11464 419 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 RPRMLQ8N4K4 120 aa7.52□□□□□ -1.21
TTC28-208ENST00000612946 ZNF775Q96BV0 537 aaPredicted RBP7.52□□□□□ -1.21
TTC28-208ENST00000612946 RAMP3O60896 148 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 ZNF415Q09FC8 603 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 FAM78AQ5JUQ0 283 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 C6orf15Q6UXA7 325 aaPredicted RBP7.51□□□□□ -1.21
TTC28-208ENST00000612946 TMEM108Q6UXF1 575 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 TDHQ8IZJ6 230 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 SRSF12Q8WXF0 261 aaKnown RBP7.51□□□□□ -1.21
TTC28-208ENST00000612946 TRBV20OR9-2A0A075B6H5 130 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 J3KT08 172 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 UBE2L6O14933 153 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 TMEM144Q7Z5S9 345 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 FGFRL1Q8N441 504 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 GPR6P46095 362 aaPredicted RBP7.51□□□□□ -1.21
TTC28-208ENST00000612946 TM4SF19Q96DZ7 209 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 A0A0G2JK05 382 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 GPX1P07203 203 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 FSCN3Q9NQT6 498 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 BEX4Q9NWD9 120 aaPredicted RBP7.51□□□□□ -1.21
TTC28-208ENST00000612946 SYNGR3O43761 229 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 IGHV2-5P01817 119 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 HMGA1P17096 107 aaKnown RBP7.51□□□□□ -1.21
TTC28-208ENST00000612946 SRSF1Q07955 248 aaKnown RBP eCLIP7.51□□□□□ -1.21
TTC28-208ENST00000612946 SPINK9Q5DT21 86 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 GPBAR1Q8TDU6 330 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 C18orf12Q96KH6 178 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 TNFRSF6BO95407 300 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 LY6G6FQ5SQ64 297 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 LINC01545Q5VT33 79 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 FAM90A2PQ658T7 463 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 PRSS27Q9BQR3 290 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 FGF22Q9HCT0 170 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 BRCA1P38398 1863 aaKnown RBP7.51□□□□□ -1.21
TTC28-208ENST00000612946 IL11P20809 199 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 CXorf66Q5JRM2 361 aaPredicted RBP7.51□□□□□ -1.21
TTC28-208ENST00000612946 ERG28Q9UKR5 140 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 NHSL1Q5SYE7 1610 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 TRACP01848 142 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 FXYD3Q14802 87 aa7.51□□□□□ -1.21
TTC28-208ENST00000612946 MRPL43Q8N983 215 aaKnown RBP7.51□□□□□ -1.21
TTC28-208ENST00000612946 F2Z2F3 143 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 ATXN7O15265 892 aaPredicted RBP7.5□□□□□ -1.21
TTC28-208ENST00000612946 TRA2AQ13595 282 aaKnown RBP eCLIP7.5□□□□□ -1.21
TTC28-208ENST00000612946 SNHG12Q9BXW3 62 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 TWSG1Q9GZX9 223 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 HCFC2Q9Y5Z7 792 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 MBNL2Q5VZF2 373 aaKnown RBP7.5□□□□□ -1.21
TTC28-208ENST00000612946 LOXL4Q96JB6 756 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 PLAUP00749 431 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 FGF11Q92914 225 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 ASCL2Q99929 193 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 KLHDC3Q9BQ90 382 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 CSTL1Q9H114 145 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 GAGE12HA6NDE8 117 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 LEPP41159 167 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 ID4P47928 161 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 CLEC2AQ6UVW9 174 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 PRDM14Q9GZV8 571 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms