RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 TAF15Q92804 592 aaKnown RBP eCLIP17.96■□□□□ 0.47
UBE3C-209ENST00000611269 RSG1Q9BU20 258 aa17.96■□□□□ 0.47
UBE3C-209ENST00000611269 TMEM147Q9BVK8 224 aa17.96■□□□□ 0.47
UBE3C-209ENST00000611269 C7orf69Q9H7B7 122 aa17.96■□□□□ 0.47
UBE3C-209ENST00000611269 SLC35D1Q9NTN3 355 aa17.96■□□□□ 0.47
UBE3C-209ENST00000611269 TIMM9Q9Y5J7 89 aa17.96■□□□□ 0.47
UBE3C-209ENST00000611269 C15orf61A6NNL5 157 aa17.95■□□□□ 0.46
UBE3C-209ENST00000611269 ARG1P05089 322 aa17.95■□□□□ 0.46
UBE3C-209ENST00000611269 SPINK9Q5DT21 86 aa17.95■□□□□ 0.46
UBE3C-209ENST00000611269 CLCC1Q96S66 551 aa17.95■□□□□ 0.46
UBE3C-209ENST00000611269 AIFM2Q9BRQ8 373 aa17.95■□□□□ 0.46
UBE3C-209ENST00000611269 PBDC1Q9BVG4 233 aa17.95■□□□□ 0.46
UBE3C-209ENST00000611269 FOXA2Q9Y261 457 aaPredicted RBP17.95■□□□□ 0.46
UBE3C-209ENST00000611269 C15orf62A8K5M9 175 aa17.95■□□□□ 0.46
UBE3C-209ENST00000611269 SFTA3P0C7M3 94 aa17.95■□□□□ 0.46
UBE3C-209ENST00000611269 TMEM14BQ9NUH8 114 aa17.95■□□□□ 0.46
UBE3C-209ENST00000611269 GUCA2BQ16661 112 aa17.94■□□□□ 0.46
UBE3C-209ENST00000611269 LHX4Q969G2 390 aa17.94■□□□□ 0.46
UBE3C-209ENST00000611269 SMDT1Q9H4I9 107 aa17.94■□□□□ 0.46
UBE3C-209ENST00000611269 TRAV1-1A0A0B4J248 108 aa17.93■□□□□ 0.46
UBE3C-209ENST00000611269 IGLV1-47P01700 117 aa17.93■□□□□ 0.46
UBE3C-209ENST00000611269 OR11H6Q8NGC7 330 aa17.93■□□□□ 0.46
UBE3C-209ENST00000611269 OR5AN1Q8NGI8 311 aa17.93■□□□□ 0.46
UBE3C-209ENST00000611269 OR10X1Q8NGY0 326 aa17.93■□□□□ 0.46
UBE3C-209ENST00000611269 NKX6-2Q9C056 277 aaPredicted RBP17.93■□□□□ 0.46
UBE3C-209ENST00000611269 TCF19Q9Y242 345 aa17.93■□□□□ 0.46
UBE3C-209ENST00000611269 UBE2L5PA0A1B0GUS4 154 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 HBE1P02100 147 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 ZNF137PP52743 207 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 PRRX1P54821 245 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 HSPE1P61604 102 aaKnown RBP17.92■□□□□ 0.46
UBE3C-209ENST00000611269 EIF5A2Q9GZV4 153 aaKnown RBP17.92■□□□□ 0.46
UBE3C-209ENST00000611269 RPRMQ9NS64 109 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 CSPG4Q6UVK1 2322 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 ACANP16112 2415 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 A0A1W2PRD5 423 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 A0A1W2PRF3 423 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 A0A1W2PRM7 423 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 MDKP21741 143 aaPredicted RBP17.92■□□□□ 0.46
UBE3C-209ENST00000611269 CCL20P78556 96 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 HLA-DRB5Q30154 266 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 BEND2Q8NDZ0 799 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 OSR1Q8TAX0 266 aaPredicted RBP17.92■□□□□ 0.46
UBE3C-209ENST00000611269 ST6GALNAC6Q969X2 333 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 MRPL20Q9BYC9 149 aaKnown RBP17.92■□□□□ 0.46
UBE3C-209ENST00000611269 HEYLQ9NQ87 328 aaPredicted RBP17.92■□□□□ 0.46
UBE3C-209ENST00000611269 KIAA1456Q9P272 454 aa17.92■□□□□ 0.46
UBE3C-209ENST00000611269 AVPP01185 164 aa17.91■□□□□ 0.46
UBE3C-209ENST00000611269 IGKV1-16P04430 117 aa17.91■□□□□ 0.46
UBE3C-209ENST00000611269 RAB2AP61019 212 aa17.91■□□□□ 0.46
UBE3C-209ENST00000611269 OR4P4Q8NGL7 312 aa17.91■□□□□ 0.46
UBE3C-209ENST00000611269 PRNDQ9UKY0 176 aa17.91■□□□□ 0.46
UBE3C-209ENST00000611269 ODF3BA8MYP8 253 aa17.9■□□□□ 0.46
UBE3C-209ENST00000611269 H0YJW9 148 aa17.9■□□□□ 0.46
UBE3C-209ENST00000611269 J3QLI3 93 aa17.9■□□□□ 0.46
UBE3C-209ENST00000611269 UPK2O00526 184 aa17.9■□□□□ 0.46
UBE3C-209ENST00000611269 APOA2P02652 100 aa17.9■□□□□ 0.46
UBE3C-209ENST00000611269 SFT2D1Q8WV19 159 aa17.9■□□□□ 0.46
UBE3C-209ENST00000611269 MBD3L1Q8WWY6 194 aa17.9■□□□□ 0.46
UBE3C-209ENST00000611269 GGACTQ9BVM4 153 aa17.9■□□□□ 0.46
UBE3C-209ENST00000611269 ZNF257Q9Y2Q1 563 aa17.9■□□□□ 0.46
UBE3C-209ENST00000611269 TMA7Q9Y2S6 64 aaKnown RBP17.9■□□□□ 0.46
UBE3C-209ENST00000611269 SRRM4A7MD48 611 aaKnown RBP17.9■□□□□ 0.46
UBE3C-209ENST00000611269 SNAPINO95295 136 aa17.9■□□□□ 0.46
UBE3C-209ENST00000611269 IFNA10P01566 189 aa17.9■□□□□ 0.46
UBE3C-209ENST00000611269 TMEM41BQ5BJD5 291 aa17.9■□□□□ 0.46
UBE3C-209ENST00000611269 RBMXL1Q96E39 390 aaKnown RBP17.9■□□□□ 0.46
UBE3C-209ENST00000611269 BET1LQ9NYM9 111 aa17.9■□□□□ 0.46
UBE3C-209ENST00000611269 CENPVL3A0A0U1RRI6 287 aa17.89■□□□□ 0.45
UBE3C-209ENST00000611269 UBE2E1P51965 193 aa17.89■□□□□ 0.45
UBE3C-209ENST00000611269 TMEM177Q53S58 311 aa17.89■□□□□ 0.45
UBE3C-209ENST00000611269 VSIRQ9H7M9 311 aa17.89■□□□□ 0.45
UBE3C-209ENST00000611269 TLN2Q9Y4G6 2542 aa17.89■□□□□ 0.45
UBE3C-209ENST00000611269 TRAV40A0A0B4J280 105 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 A0A1B0GV50 99 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 RBFOX3A6NFN3 312 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 CYSRT1A8MQ03 144 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 BUB1B-PAK6H3BSN5 160 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 DNASE2O00115 360 aaPredicted RBP17.88■□□□□ 0.45
UBE3C-209ENST00000611269 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.88■□□□□ 0.45
UBE3C-209ENST00000611269 NABP2Q9BQ15 211 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 OR51B2Q9Y5P1 312 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 IGHV3OR16-10A0A075B7F0 116 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 FGF7P21781 194 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 HOXA1P49639 335 aaPredicted RBP17.88■□□□□ 0.45
UBE3C-209ENST00000611269 PPT1P50897 306 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 RPS16P62249 146 aaKnown RBP17.88■□□□□ 0.45
UBE3C-209ENST00000611269 KRTAP1-1Q07627 177 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 DIAPH2-AS1Q14236 149 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 LDLRAD2Q5SZI1 272 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 FKBP11Q9NYL4 201 aa17.88■□□□□ 0.45
UBE3C-209ENST00000611269 PRSS46E5RG02 174 aa17.87■□□□□ 0.45
UBE3C-209ENST00000611269 RRHO14718 337 aa17.87■□□□□ 0.45
UBE3C-209ENST00000611269 KBTBD11O94819 623 aa17.87■□□□□ 0.45
UBE3C-209ENST00000611269 ETV3LQ6ZN32 361 aa17.87■□□□□ 0.45
UBE3C-209ENST00000611269 PDPNQ86YL7 162 aa17.87■□□□□ 0.45
UBE3C-209ENST00000611269 SLC35B3Q9H1N7 401 aa17.87■□□□□ 0.45
UBE3C-209ENST00000611269 AMMECR1Q9Y4X0 333 aaPredicted RBP17.87■□□□□ 0.45
UBE3C-209ENST00000611269 IGHV4-38-2P0DP08 117 aa17.86■□□□□ 0.45
UBE3C-209ENST00000611269 IL3RAP26951 378 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms