RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 TMSB15BA0A087X1C1 80 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 SMAD7O15105 426 aaKnown RBP6.06□□□□□ -1.44
CSDE1-218ENST00000610726 THBDP07204 575 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 FCGR2BP31994 310 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-218ENST00000610726 BMI1P35226 326 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 TMPRSS5Q9H3S3 457 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 SRD5A3Q9H8P0 318 aa6.06□□□□□ -1.44
CSDE1-218ENST00000610726 TGFAP01135 160 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 SAA1P0DJI8 122 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-218ENST00000610726 ARL14EPLP0DKL9 152 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 GATA2P23769 480 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-218ENST00000610726 DUTP33316 252 aaKnown RBP6.05□□□□□ -1.44
CSDE1-218ENST00000610726 DPPA3Q6W0C5 159 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 BIVMQ86UB2 503 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 SIGLECL1Q8N7X8 197 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-218ENST00000610726 LHFPL5Q8TAF8 219 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 C18orf12Q96KH6 178 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 NABP2Q9BQ15 211 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 C7orf69Q9H7B7 122 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 DNAJC4Q9NNZ3 241 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 FAM215AQ9Y5M1 114 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 MFSD2BA6NFX1 497 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 RRHO14718 337 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 HTN1P15515 57 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 MPZP25189 248 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 SLC35B1P78383 322 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 TFF3Q07654 80 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 Q6P435 159 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 PQLC2Q6ZP29 291 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 STPG3Q8N7X2 389 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 COQ2Q96H96 371 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 RCC1LQ96I51 464 aaKnown RBP6.05□□□□□ -1.44
CSDE1-218ENST00000610726 C1orf147Q96MC9 270 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-218ENST00000610726 TMEM133Q9H2Q1 129 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 IGKV1D-17A0A075B6S4 117 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 IGHV3OR16-8A0A075B7F1 116 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 PGPA6NDG6 321 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 NPIPB11E5RHQ5 1161 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 TMEM178BH3BS89 294 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 PMCHP20382 165 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 TFPI2P48307 235 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 MFAP4P55083 255 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 RPL30P62888 115 aaKnown RBP6.05□□□□□ -1.44
CSDE1-218ENST00000610726 ZNF273Q14593 569 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 HLA-DRB5Q30154 266 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 ST6GALNAC3Q8NDV1 305 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 TMEM18Q96B42 140 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 GAR1Q9NY12 217 aaKnown RBP6.05□□□□□ -1.44
CSDE1-218ENST00000610726 CRIM1Q9NZV1 1036 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 RPUSD1Q9UJJ7 312 aaKnown RBP6.05□□□□□ -1.44
CSDE1-218ENST00000610726 PITPNC1Q9UKF7 332 aa6.05□□□□□ -1.44
CSDE1-218ENST00000610726 ORM1P02763 201 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 ID3Q02535 119 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 RPEL1Q2QD12 228 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 DCAF16Q9NXF7 216 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 FAM74A7A6NL05 159 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 OR2J3O76001 311 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 P01737 135 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 IGHV3-23P01764 117 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 C8orf88P0DMB2 117 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 IGFBP2P18065 325 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 PAX6P26367 422 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 FAM74A3Q4VXF1 159 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 OR1L6Q8NGR2 347 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 SGMS2Q8NHU3 365 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 TMEM208Q9BTX3 173 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 NPCDR1Q9BY65 106 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 CGB1A6NKQ9 187 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 E7EQL1 145 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 SLC31A2O15432 143 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 S100A8P05109 93 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 KRTDAPP60985 99 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 Q6ZR03 302 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 PRNTQ86SH4 94 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 RNF138Q8WVD3 245 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 ZNF586Q9NXT0 402 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 NAV2Q8IVL1 2488 aa6.04□□□□□ -1.44
CSDE1-218ENST00000610726 IGHV3-49A0A0A0MS15 119 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 ZNF137PP52743 207 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 BPIFA4PQ86YQ2 179 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 OR51G1Q8NGK1 321 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 OR10D4PQ8NGN7 298 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 SPRY4Q9C004 299 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 SMDT1Q9H4I9 107 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 B4DEV8 164 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 IL4P05112 153 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 CSN3P07498 182 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 OR9G9P0C7N8 305 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 RAB5AP20339 215 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 CRYBB3P26998 211 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 HERPUD1Q15011 391 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 RNF212Q495C1 297 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 C10orf55Q5SWW7 151 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 TMEM200BQ69YZ2 307 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 ZNF705AQ6ZN79 300 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-218ENST00000610726 IFI27L2Q9H2X8 130 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 ABCA2Q9BZC7 2435 aa6.03□□□□□ -1.44
CSDE1-218ENST00000610726 COL4A4P53420 1690 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-218ENST00000610726 PHOX2AO14813 284 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms