RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 AKAIN1P0CW23 69 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 PI3P19957 117 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 RND3P61587 244 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 C19orf35Q6ZS72 473 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 LHFPL1Q86WI0 220 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 OR4D10Q8NGI6 311 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 OR9G4Q8NGQ1 327 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 OR4A16Q8NH70 328 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 LSM10Q969L4 123 aaKnown RBP10.27□□□□□ -0.77
SENP3-209ENST00000610454 CXorf58Q96LI9 332 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 TMEM56Q96MV1 263 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 SLIRPQ9GZT3 109 aaKnown RBP10.27□□□□□ -0.77
SENP3-209ENST00000610454 C14orf166Q9Y224 244 aaKnown RBP10.27□□□□□ -0.77
SENP3-209ENST00000610454 NSG2Q9Y328 171 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 OR51B2Q9Y5P1 312 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 CEPT1Q9Y6K0 416 aa10.27□□□□□ -0.77
SENP3-209ENST00000610454 IGLC7A0M8Q6 106 aa10.26□□□□□ -0.77
SENP3-209ENST00000610454 FABP12A6NFH5 140 aa10.26□□□□□ -0.77
SENP3-209ENST00000610454 OR13C7P0DN81 318 aa10.26□□□□□ -0.77
SENP3-209ENST00000610454 PTBP1P26599 531 aaKnown RBP eCLIP10.26□□□□□ -0.77
SENP3-209ENST00000610454 S100A5P33763 92 aa10.26□□□□□ -0.77
SENP3-209ENST00000610454 AKR1C2P52895 323 aa10.26□□□□□ -0.77
SENP3-209ENST00000610454 TRIM16LQ309B1 348 aa10.26□□□□□ -0.77
SENP3-209ENST00000610454 CADM3Q8N126 398 aa10.26□□□□□ -0.77
SENP3-209ENST00000610454 OR5B3Q8NH48 314 aa10.26□□□□□ -0.77
SENP3-209ENST00000610454 TRBV7-1A0A0A6YYK4 115 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 C3orf85A0A1B0GTC6 90 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 TEX50A0A1B0GTY4 177 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 CGB1A6NKQ9 187 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 C15orf61A6NNL5 157 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 PPP5D1E7EU14 171 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 H0Y980 276 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 BMPR1BO00238 502 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 GGCTO75223 188 aaKnown RBP10.25□□□□□ -0.77
SENP3-209ENST00000610454 NDUFB8O95169 186 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 IGHV3-23P01764 117 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 GP9P14770 177 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 SPNP16150 400 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 TNFSF8P32971 234 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 ARL3P36405 182 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 FAAP20Q6NZ36 180 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 CLEC19AQ6UXS0 136 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 GDPD1Q8N9F7 314 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 OR10W1Q8NGF6 305 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 OR13C8Q8NGS7 320 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 RNASE11Q8TAA1 199 aaKnown RBP10.25□□□□□ -0.77
SENP3-209ENST00000610454 MARCH1Q8TCQ1 289 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 MRGPRFQ96AM1 343 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 FANCD2OSQ96PS1 177 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 PRRT1Q99946 306 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 B9D2Q9BPU9 175 aa10.25□□□□□ -0.77
SENP3-209ENST00000610454 IGLV11-55A0A075B6I3 123 aa10.24□□□□□ -0.77
SENP3-209ENST00000610454 TEX13DA0A0J9YY54 714 aaPredicted RBP10.24□□□□□ -0.77
SENP3-209ENST00000610454 GSTZ1O43708 216 aaPredicted RBP10.24□□□□□ -0.77
SENP3-209ENST00000610454 B3GALNT1O75752 331 aa10.24□□□□□ -0.77
SENP3-209ENST00000610454 SLC25A24Q6NUK1 477 aa10.24□□□□□ -0.77
SENP3-209ENST00000610454 OR4C16Q8NGL9 310 aa10.24□□□□□ -0.77
SENP3-209ENST00000610454 OR1L6Q8NGR2 347 aa10.24□□□□□ -0.77
SENP3-209ENST00000610454 SEC22AQ96IW7 307 aa10.24□□□□□ -0.77
SENP3-209ENST00000610454 PDCD10Q9BUL8 212 aa10.24□□□□□ -0.77
SENP3-209ENST00000610454 NDUFA4L2Q9NRX3 87 aa10.24□□□□□ -0.77
SENP3-209ENST00000610454 TMEM14BQ9NUH8 114 aa10.24□□□□□ -0.77
SENP3-209ENST00000610454 SCP2D1Q9UJQ7 156 aa10.24□□□□□ -0.77
SENP3-209ENST00000610454 SMAD5-AS1Q9Y6J3 95 aa10.24□□□□□ -0.77
SENP3-209ENST00000610454 S4R3C0 116 aa10.24□□□□□ -0.77
SENP3-209ENST00000610454 IGLV1-51P01701 117 aa10.23□□□□□ -0.77
SENP3-209ENST00000610454 CTSDP07339 412 aaPredicted RBP10.23□□□□□ -0.77
SENP3-209ENST00000610454 FAUP35544 74 aaKnown RBP10.23□□□□□ -0.77
SENP3-209ENST00000610454 WT1-ASQ06250 92 aa10.23□□□□□ -0.77
SENP3-209ENST00000610454 SURF2Q15527 256 aaPredicted RBP10.23□□□□□ -0.77
SENP3-209ENST00000610454 FAM106AQ4KMX7 169 aa10.23□□□□□ -0.77
SENP3-209ENST00000610454 LCN12Q6JVE5 192 aa10.23□□□□□ -0.77
SENP3-209ENST00000610454 HAPLN4Q86UW8 402 aa10.23□□□□□ -0.77
SENP3-209ENST00000610454 DYNLRB2Q8TF09 96 aa10.23□□□□□ -0.77
SENP3-209ENST00000610454 RRNAD1Q96FB5 475 aaKnown RBP10.23□□□□□ -0.77
SENP3-209ENST00000610454 TP53RKQ96S44 253 aa10.23□□□□□ -0.77
SENP3-209ENST00000610454 NXF2Q9GZY0 626 aaKnown RBP10.23□□□□□ -0.77
SENP3-209ENST00000610454 MCUBQ9NWR8 336 aa10.23□□□□□ -0.77
SENP3-209ENST00000610454 ANKRD20A5PA0PJZ0 165 aa10.22□□□□□ -0.77
SENP3-209ENST00000610454 MFSD2BA6NFX1 497 aa10.22□□□□□ -0.77
SENP3-209ENST00000610454 ZNF701M0R085 212 aaPredicted RBP10.22□□□□□ -0.77
SENP3-209ENST00000610454 IGKV1-39P01597 117 aa10.22□□□□□ -0.77
SENP3-209ENST00000610454 HLA-AP01891 365 aaKnown RBP10.22□□□□□ -0.77
SENP3-209ENST00000610454 IGKV1D-39P04432 117 aa10.22□□□□□ -0.77
SENP3-209ENST00000610454 AP3S2P59780 193 aa10.22□□□□□ -0.77
SENP3-209ENST00000610454 KLK9Q2XQG4 91 aa10.22□□□□□ -0.77
SENP3-209ENST00000610454 PYDC2Q56P42 97 aa10.22□□□□□ -0.77
SENP3-209ENST00000610454 OR51S1Q8NGJ8 323 aa10.22□□□□□ -0.77
SENP3-209ENST00000610454 CCDC140Q96MF4 163 aa10.22□□□□□ -0.77
SENP3-209ENST00000610454 SCGB3A2Q96PL1 93 aa10.22□□□□□ -0.77
SENP3-209ENST00000610454 PLEKHA3Q9HB20 300 aa10.22□□□□□ -0.77
SENP3-209ENST00000610454 KLK9Q9UKQ9 250 aa10.22□□□□□ -0.77
SENP3-209ENST00000610454 LSM4Q9Y4Z0 139 aaKnown RBP10.22□□□□□ -0.77
SENP3-209ENST00000610454 F11RQ9Y624 299 aaKnown RBP10.22□□□□□ -0.77
SENP3-209ENST00000610454 ZNF320A2RRD8 509 aa10.21□□□□□ -0.77
SENP3-209ENST00000610454 OR2C1O95371 312 aa10.21□□□□□ -0.77
SENP3-209ENST00000610454 CLEC3BP05452 202 aa10.21□□□□□ -0.77
SENP3-209ENST00000610454 CSN3P07498 182 aa10.21□□□□□ -0.77
SENP3-209ENST00000610454 GPR183P32249 361 aa10.21□□□□□ -0.77
SENP3-209ENST00000610454 SP6Q3SY56 376 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms