RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 CACNG8Q8WXS5 425 aa11.93□□□□□ -0.5
LINC02538-201ENST00000609107 RALYQ9UKM9 306 aaKnown RBP11.93□□□□□ -0.5
LINC02538-201ENST00000609107 SAA2-SAA4A0A096LPE2 208 aa11.93□□□□□ -0.5
LINC02538-201ENST00000609107 DIRC3C9JPN6 131 aa11.93□□□□□ -0.5
LINC02538-201ENST00000609107 TFF1P04155 84 aa11.93□□□□□ -0.5
LINC02538-201ENST00000609107 SAA2P0DJI9 122 aaPredicted RBP11.93□□□□□ -0.5
LINC02538-201ENST00000609107 PEAR1Q5VY43 1037 aaPredicted RBP11.93□□□□□ -0.5
LINC02538-201ENST00000609107 C19orf35Q6ZS72 473 aa11.93□□□□□ -0.5
LINC02538-201ENST00000609107 SSX7Q7RTT5 188 aa11.93□□□□□ -0.5
LINC02538-201ENST00000609107 LYPD6Q86Y78 171 aa11.93□□□□□ -0.5
LINC02538-201ENST00000609107 CLEC7AQ9BXN2 247 aa11.93□□□□□ -0.5
LINC02538-201ENST00000609107 PPIAL4CA0A0B4J2A2 164 aa11.92□□□□□ -0.5
LINC02538-201ENST00000609107 AMY1AP04745 511 aa11.92□□□□□ -0.5
LINC02538-201ENST00000609107 PPIAL4GP0DN37 164 aa11.92□□□□□ -0.5
LINC02538-201ENST00000609107 FOXF2Q12947 444 aa11.92□□□□□ -0.5
LINC02538-201ENST00000609107 Q6ZN92 141 aa11.92□□□□□ -0.5
LINC02538-201ENST00000609107 C17orf100A8MU93 164 aa11.92□□□□□ -0.5
LINC02538-201ENST00000609107 GPR6P46095 362 aaPredicted RBP11.92□□□□□ -0.5
LINC02538-201ENST00000609107 MAJINQ3KP22 176 aa11.92□□□□□ -0.5
LINC02538-201ENST00000609107 TMEM144Q7Z5S9 345 aa11.92□□□□□ -0.5
LINC02538-201ENST00000609107 PAM16Q9Y3D7 125 aa11.92□□□□□ -0.5
LINC02538-201ENST00000609107 UPK2O00526 184 aa11.92□□□□□ -0.5
LINC02538-201ENST00000609107 OR9G9P0C7N8 305 aa11.92□□□□□ -0.5
LINC02538-201ENST00000609107 VPS25Q9BRG1 176 aa11.92□□□□□ -0.5
LINC02538-201ENST00000609107 SLC31A2O15432 143 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 CGAP01215 116 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 IGHG3P01860 377 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 RPL30P62888 115 aaKnown RBP11.91□□□□□ -0.5
LINC02538-201ENST00000609107 GAMTQ14353 236 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 VAMP3Q15836 100 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 C1QL4Q86Z23 238 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 NHLRC2Q8NBF2 726 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 TMUB1Q9BVT8 246 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 MRPL37Q9BZE1 423 aaKnown RBP11.91□□□□□ -0.5
LINC02538-201ENST00000609107 IL36BQ9NZH7 164 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 DKK1O94907 266 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 GOSR1O95249 250 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 SNRPCP09234 159 aaKnown RBP11.91□□□□□ -0.5
LINC02538-201ENST00000609107 APOBEC3AP31941 199 aaPredicted RBP11.91□□□□□ -0.5
LINC02538-201ENST00000609107 BPIFA4PQ86YQ2 179 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 GRAMD2BQ96HH9 432 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 LIME1Q9H400 295 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 TRAV9-1A0A075B6T8 112 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 TRAV34A0A0B4J273 112 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 SCO2A0A1W2PP80 73 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 C5orf52A6NGY3 159 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 F2RL2O00254 374 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 S100A4P26447 101 aaKnown RBP11.91□□□□□ -0.5
LINC02538-201ENST00000609107 FXYD3Q14802 87 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 C20orf204Q6ZNR8 217 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 C5orf17Q8NAS9 161 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 HS3ST6Q96QI5 342 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 IGKV1-6A0A0C4DH72 117 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 CSN3P07498 182 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 CA7P43166 264 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 PRNTQ86SH4 94 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 OR4A5Q8NH83 315 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 BET1LQ9NYM9 111 aa11.91□□□□□ -0.5
LINC02538-201ENST00000609107 FOXI3A8MTJ6 420 aaPredicted RBP11.9□□□□□ -0.5
LINC02538-201ENST00000609107 CD99P14209 185 aa11.9□□□□□ -0.5
LINC02538-201ENST00000609107 DMRTA2Q96SC8 542 aa11.9□□□□□ -0.5
LINC02538-201ENST00000609107 A0A0G2JRQ6 117 aa11.9□□□□□ -0.5
LINC02538-201ENST00000609107 BSPH1Q075Z2 132 aa11.9□□□□□ -0.5
LINC02538-201ENST00000609107 MRPL20Q9BYC9 149 aaKnown RBP11.9□□□□□ -0.5
LINC02538-201ENST00000609107 HILPDAQ9Y5L2 63 aa11.9□□□□□ -0.5
LINC02538-201ENST00000609107 TRBV24-1A0A075B6N3 115 aa11.9□□□□□ -0.5
LINC02538-201ENST00000609107 TMPRSS3P57727 454 aa11.9□□□□□ -0.5
LINC02538-201ENST00000609107 RNASEH2CQ8TDP1 164 aaKnown RBP11.9□□□□□ -0.5
LINC02538-201ENST00000609107 MAP1LC3CQ9BXW4 147 aa11.9□□□□□ -0.5
LINC02538-201ENST00000609107 RFNGQ9Y644 331 aa11.9□□□□□ -0.5
LINC02538-201ENST00000609107 ICE1Q9Y2F5 2266 aa11.9□□□□□ -0.5
LINC02538-201ENST00000609107 OR5AL1P0C617 328 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 NTF4P34130 210 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 GPX4P36969 197 aaPredicted RBP11.89□□□□□ -0.51
LINC02538-201ENST00000609107 NHLH1Q02575 133 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 IL15RAQ13261 267 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 GSX1Q9H4S2 264 aaPredicted RBP11.89□□□□□ -0.51
LINC02538-201ENST00000609107 HIST1H2BKO60814 126 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 REG1AP05451 166 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 HIST1H2BJP06899 126 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 HIST1H2BOP23527 126 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 HIST1H2BBP33778 126 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 HIST1H2BDP58876 126 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 HIST1H2BCP62807 126 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 HIST2H2BEQ16778 126 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.89□□□□□ -0.51
LINC02538-201ENST00000609107 HIST1H2BHQ93079 126 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 SNRNP40Q96DI7 357 aaKnown RBP11.89□□□□□ -0.51
LINC02538-201ENST00000609107 HIST1H2BNQ99877 126 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 HIST1H2BMQ99879 126 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 PARD6GQ9BYG4 376 aaPredicted RBP11.89□□□□□ -0.51
LINC02538-201ENST00000609107 MBNL3Q9NUK0 354 aaKnown RBP11.89□□□□□ -0.51
LINC02538-201ENST00000609107 TEX50A0A1B0GTY4 177 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 RPP25LQ8N5L8 163 aaKnown RBP11.89□□□□□ -0.51
LINC02538-201ENST00000609107 LIPFP07098 398 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 TAS2R60P59551 318 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 MUC15Q8N387 334 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 SLC25A15Q9Y619 301 aa11.89□□□□□ -0.51
LINC02538-201ENST00000609107 SAA1P0DJI8 122 aaPredicted RBP11.88□□□□□ -0.51
LINC02538-201ENST00000609107 CBLN1P23435 193 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms