RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 OR5B17Q8NGF7 314 aa0.95□□□□□ -2.26
RNU6-88P-201ENST00000606801 TESCQ96BS2 214 aa0.95□□□□□ -2.26
RNU6-88P-201ENST00000606801 ERMAPQ96PL5 475 aaPredicted RBP0.95□□□□□ -2.26
RNU6-88P-201ENST00000606801 ADAT1Q9BUB4 502 aaKnown RBP0.95□□□□□ -2.26
RNU6-88P-201ENST00000606801 CISHQ9NSE2 258 aa0.95□□□□□ -2.26
RNU6-88P-201ENST00000606801 FGFR1OP2Q9NVK5 253 aa0.95□□□□□ -2.26
RNU6-88P-201ENST00000606801 FKBP14Q9NWM8 211 aa0.95□□□□□ -2.26
RNU6-88P-201ENST00000606801 LHFPL6Q9Y693 200 aa0.95□□□□□ -2.26
RNU6-88P-201ENST00000606801 DCCP43146 1447 aa0.95□□□□□ -2.26
RNU6-88P-201ENST00000606801 TONSLQ96HA7 1378 aa0.95□□□□□ -2.26
RNU6-88P-201ENST00000606801 ZNF106Q9H2Y7 1883 aaKnown RBP0.95□□□□□ -2.26
RNU6-88P-201ENST00000606801 EVC2Q86UK5 1308 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 TNRC6AQ8NDV7 1962 aaKnown RBP0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 HECW1Q76N89 1606 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 TRBV10-2A0A0K0K1G8 114 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 LRRN3E7EW58 273 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 SLC16A4O15374 487 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 MRPS14O60783 128 aaKnown RBP0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 IGHV3-7P01780 117 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 APOEP02649 317 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 KRT7P08729 469 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 SRP19P09132 144 aaKnown RBP0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 MYL12AP19105 171 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 CCR7P32248 378 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 HAAOP46952 286 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 SUPT4H1P63272 117 aaKnown RBP0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 TPM4P67936 248 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 COTL1Q14019 142 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 GUK1Q16774 197 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 TMEM86AQ8N2M4 240 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 ZNF676Q8N7Q3 588 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 RSL24D1Q9UHA3 163 aaKnown RBP0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 SETD5Q9C0A6 1442 aa0.94□□□□□ -2.26
RNU6-88P-201ENST00000606801 IGKV3D-7A0A0C4DH55 119 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 IGKV3OR2-268A0A0C4DH90 116 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 GGT3PA6NGU5 568 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 F8W036 122 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 RPSAP08865 295 aaKnown RBP0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 SULT1A3P0DMM9 295 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 SULT1A4P0DMN0 295 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 FGF6P10767 208 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 RAB5BP61020 215 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 CDK5R1Q15078 307 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 ELOBQ15370 118 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 KISS1Q15726 138 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 BATFQ16520 125 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 OGFRL1Q5TC84 451 aaPredicted RBP0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 KLK6Q92876 244 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 ROPN1LQ96C74 230 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 NKIRAS1Q9NYS0 192 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 USE1Q9NZ43 259 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 IL36BQ9NZH7 164 aa0.93□□□□□ -2.26
RNU6-88P-201ENST00000606801 C9orf84Q5VXU9 1444 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 CEP192Q8TEP8 1941 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 IGKV1D-43A0A0B4J1Z2 117 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 A0A0J9YY10 115 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 A0A1B0GX78 115 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 CTAG1AP78358 180 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 COQ5Q5HYK3 327 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 SYPL2Q5VXT5 272 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 DHFR2Q86XF0 187 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 C10orf67Q8IYJ2 551 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 TMEM86BQ8N661 226 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 OR51D1Q8NGF3 324 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 DDI1Q8WTU0 396 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 PTH2Q96A98 100 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 CNBD2Q96M20 576 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 EFCAB1Q9HAE3 211 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 BAIAP2Q9UQB8 552 aa0.92□□□□□ -2.26
RNU6-88P-201ENST00000606801 HECW2Q9P2P5 1572 aa0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 ACOX3O15254 700 aa0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 TGOLN2O43493 480 aa0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 C1QAP02745 245 aa0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 ISG15P05161 165 aa0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 UCHL3P15374 230 aa0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 KCNE1P15382 129 aa0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 ZNF80P51504 273 aaPredicted RBP0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 TCL1AP56279 114 aa0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 RPL18Q07020 188 aaKnown RBP0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 C1orf158Q8N1D5 194 aa0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 OR8B3Q8NGG8 313 aa0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 OPTNQ96CV9 577 aa0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 TP73-AS1Q9UF72 201 aa0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 SNAPC4Q5SXM2 1469 aa0.91□□□□□ -2.26
RNU6-88P-201ENST00000606801 ECM29Q5VYK3 1845 aa0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 IGKV2-40A0A087WW87 121 aaPredicted RBP0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 SLC22A1O15245 554 aa0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 HCRTO43612 131 aa0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 IGKV1-5P01602 117 aa0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 IGKV2D-40P01614 121 aaPredicted RBP0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 RNASE3P12724 160 aaKnown RBP0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 AP2S1P53680 142 aaPredicted RBP0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 CCL20P78556 96 aa0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 CAV1Q03135 178 aa0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 PMAIP1Q13794 54 aa0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 SURF2Q15527 256 aaPredicted RBP0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 CMTM6Q9NX76 183 aa0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 SOX21Q9Y651 276 aaPredicted RBP0.9□□□□□ -2.27
RNU6-88P-201ENST00000606801 IGKV3-7A0A075B6H7 116 aa0.89□□□□□ -2.27
RNU6-88P-201ENST00000606801 IRGMA1A4Y4 181 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms