RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ZIC3O60481 467 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 HSBP1O75506 76 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGKV1-39P01597 117 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGKV1-5P01602 117 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGKV1D-39P04432 117 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 POU2F2P09086 479 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGKV1-13P0DP09 117 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 PSG2P11465 335 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 GATA2P23769 480 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 SRIP30626 198 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 SSTR5P35346 364 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 DRD3P35462 400 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 ATP5G3P48201 142 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 GNG4P50150 75 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 METAP1P53582 386 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 RBM11P57052 281 aaKnown RBP3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 SLAQ13239 276 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 DAZAP2Q15038 168 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 TIMM23BQ5SRD1 257 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 OTPQ5XKR4 325 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 LCN12Q6JVE5 192 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 RHBDD2Q6NTF9 364 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 TMEM108Q6UXF1 575 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 MOB1BQ7L9L4 216 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 PRSS41Q7RTY9 318 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 ATP5L2Q7Z4Y8 100 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 LINC00596Q86U02 117 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF441Q8N8Z8 693 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 WDR31Q8NA23 367 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 STXBP6Q8NFX7 210 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR4X2Q8NGF9 303 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR9G4Q8NGQ1 327 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR4A16Q8NH70 328 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 SPACA9Q96E40 222 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 C5orf30Q96GV9 206 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 OXGR1Q96P68 337 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 AP1S3Q96PC3 154 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 RCHY1Q96PM5 261 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 FAM110AQ9BQ89 295 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 NDFIP1Q9BT67 221 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 NPCDR1Q9BY65 106 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 RTN4RQ9BZR6 473 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 NXF5Q9H1B4 397 aaKnown RBP3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 VCX2Q9H322 139 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 FGF22Q9HCT0 170 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF331Q9NQX6 463 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 TNFRSF19Q9NS68 423 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 KCNIP1Q9NZI2 227 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 SLC25A10Q9UBX3 287 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 CACNG5Q9UF02 275 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 RABAC1Q9UI14 185 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 JPT1Q9UK76 154 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 PILRBQ9UKJ0 227 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 PPP1R3CQ9UQK1 317 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 PIGLQ9Y2B2 252 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF257Q9Y2Q1 563 aa3.35□□□□□ -1.87
HMGB1P50-201ENST00000605814 EXPH5Q8NEV8 1989 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 TET1Q8NFU7 2136 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGKV1-27A0A075B6S5 117 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGKV1-6A0A0C4DH72 117 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGKV1-12A0A0C4DH73 117 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 A0A0G2JLM5 398 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 A0A1W2PPM0 123 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 A0A1W2PPV4 95 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 hADV38S2A0JD32 116 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 HELTA6NFD8 242 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 FAM90A9PA6NNJ1 464 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 M0R2Z0 102 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 SLC17A3O00476 420 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 MGST3O14880 152 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 PROP1O75360 226 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 NEURL1O76050 574 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 IGKV1D-12P01611 117 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 LIPFP07098 398 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 CYC1P08574 325 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 SCTP09683 121 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 CT45A6P0DMU7 189 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 CT45A5P0DMU8 189 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 CT45A7P0DMV0 189 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 IL11P20809 199 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 CRYGSP22914 178 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 CEBPDP49716 269 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 KRTAP10-9P60411 292 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 RPL31P62899 125 aaKnown RBP3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 RPS21P63220 83 aaKnown RBP3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 FKBP1BP68106 108 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 SRSF1Q07955 248 aaKnown RBP eCLIP3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 C17orf67Q0P5P2 114 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 MFAP5Q13361 173 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 RTL8BQ17RB0 113 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 POM121L1PQ3SYA9 428 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 PDLIM3Q53GG5 364 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 Q56UQ5 140 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 CT45A1Q5HYN5 189 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 SPANXN5Q5MJ07 72 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 FAM120AOSQ5T036 256 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 SPATA46Q5T0L3 261 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 LINC01545Q5VT33 79 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 C17orf99Q6UX52 265 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms