RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 SMPD3Q9NY59 655 aaPredicted RBP8.5□□□□□ -1.05
PDLIM1P1-201ENST00000604187 C21orf62Q9NYP8 219 aa8.5□□□□□ -1.05
PDLIM1P1-201ENST00000604187 TAS2R8Q9NYW2 309 aa8.5□□□□□ -1.05
PDLIM1P1-201ENST00000604187 CELA1Q9UNI1 258 aa8.5□□□□□ -1.05
PDLIM1P1-201ENST00000604187 IGHV3OR16-13A0A075B7E8 117 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 IGHV3-74A0A0B4J1X5 117 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 IGKV1D-13A0A0B4J2D9 117 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 CYB5BO43169 146 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 HRASP01112 189 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 IFNA10P01566 189 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 GIG44P09565 113 aaPredicted RBP8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 IGKV1-13P0DP09 117 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 NFYAP23511 347 aaPredicted RBP8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 TALDO1P37837 337 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 TIMM50Q3ZCQ8 353 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 AHSA2Q719I0 299 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 UBE2DNLQ8IWF7 75 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 Q8N1X5 172 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 GDPD1Q8N9F7 314 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 TMEM116Q8NCL8 245 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 CMTM3Q96MX0 182 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 GPHA2Q96T91 129 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 BET1LQ9NYM9 111 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 AK6Q9Y3D8 172 aaKnown RBP8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 OR2W1Q9Y3N9 320 aa8.49□□□□□ -1.05
PDLIM1P1-201ENST00000604187 F8W735 103 aaPredicted RBP8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 MFNGO00587 321 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 SLC22A5O76082 557 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 YIF1AO95070 293 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 HLA-DQB1P01920 261 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 HIST1H1DP16402 221 aaKnown RBP8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 DEFB131AP59861 70 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 EIF4EBP1Q13541 118 aaPredicted RBP8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 SSX1Q16384 188 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 C12orf74Q32Q52 190 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 C2orf76Q3KRA6 126 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 Q56UQ5 140 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 Q6ZRM9 215 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 NANOGP1Q8N7R0 232 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 OR10W1Q8NGF6 305 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 OR10R2Q8NGX6 335 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 SCARB1Q8WTV0 552 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 SRSF8Q9BRL6 282 aaKnown RBP8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 CENPOQ9BU64 300 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 QTRT1Q9BXR0 403 aaKnown RBP8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 COMMD5Q9GZQ3 224 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 X6R8D5 127 aa8.48□□□□□ -1.05
PDLIM1P1-201ENST00000604187 TRAV3A0A0B4J244 114 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 TMEM272A0A1B0GTI8 110 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 ZNF705EA8MWA4 302 aaPredicted RBP8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 NUPL2O15504 423 aaKnown RBP8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 IFNA21P01568 189 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 IFNA17P01571 189 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 CD74P04233 296 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 OR13C7P0DN81 318 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 C4BPBP20851 252 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 GADD45AP24522 165 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 PAFAH1B2P68402 229 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 WT1-ASQ06250 92 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 C1orf134Q5TEV5 83 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 LIPKQ5VXJ0 399 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 FAM90A2PQ658T7 463 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 SLC25A24Q6NUK1 477 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 Q6ZS49 121 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 TCF24Q7RTU0 167 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 STHQ8IWL8 128 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 MFSD4AQ8N468 514 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 FAM24BQ8N5W8 94 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 CYGBQ8WWM9 190 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 GIMAP1Q8WWP7 306 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 TMEM203Q969S6 136 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 ZNF414Q96IQ9 312 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 SCRT2Q9NQ03 307 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 PSORS1C1Q9UIG5 152 aa8.47□□□□□ -1.05
PDLIM1P1-201ENST00000604187 TNFSF12O43508 249 aa8.46□□□□□ -1.06
PDLIM1P1-201ENST00000604187 DFFBO76075 338 aa8.46□□□□□ -1.06
PDLIM1P1-201ENST00000604187 CTSGP08311 255 aa8.46□□□□□ -1.06
PDLIM1P1-201ENST00000604187 RELQ04864 619 aaPredicted RBP8.46□□□□□ -1.06
PDLIM1P1-201ENST00000604187 TMEM41BQ5BJD5 291 aa8.46□□□□□ -1.06
PDLIM1P1-201ENST00000604187 HES5Q5TA89 166 aa8.46□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ZNF66Q6ZN08 573 aa8.46□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ATP6V0BQ99437 205 aa8.46□□□□□ -1.06
PDLIM1P1-201ENST00000604187 MS4A6AQ9H2W1 248 aa8.46□□□□□ -1.06
PDLIM1P1-201ENST00000604187 CLEC5AQ9NY25 188 aa8.46□□□□□ -1.06
PDLIM1P1-201ENST00000604187 RAB22AQ9UL26 194 aa8.46□□□□□ -1.06
PDLIM1P1-201ENST00000604187 TBC1D24Q9ULP9 559 aa8.46□□□□□ -1.06
PDLIM1P1-201ENST00000604187 TRAV14DV4A0A0A6YYC5 116 aa8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 K7EIM0 57 aa8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 DNASE2O00115 360 aaPredicted RBP8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 UPK2O00526 184 aa8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ATP5HO75947 161 aa8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 SERPINE2P07093 398 aa8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 LAIR2Q6ISS4 152 aa8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 MORN3Q6PF18 240 aaPredicted RBP8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 TRPT1Q86TN4 253 aaKnown RBP8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 SPAG16Q8N0X2 631 aa8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 PQLC1Q8N2U9 271 aa8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 OR10C1Q96KK4 312 aa8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 AIFM2Q9BRQ8 373 aa8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 MND1Q9BWT6 205 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms