RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 PEBP1P30086 187 aaKnown RBP7.45□□□□□ -1.22
CSMD1-216ENST00000602557 CCL8P80075 99 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 SPSB4Q96A44 273 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 PRSS27Q9BQR3 290 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 DCAF10Q5QP82 559 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 NFAM1Q8NET5 270 aaPredicted RBP7.45□□□□□ -1.22
CSMD1-216ENST00000602557 TFF3Q07654 80 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 METTL26Q96S19 204 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 CYSLTR1Q9Y271 337 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 SMIM8Q96KF7 97 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 TMEM52Q8NDY8 209 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 NABP2Q9BQ15 211 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 EDA2RQ9HAV5 297 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 PPP1R17O96001 155 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 CELA2AP08217 269 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 TIMM23BQ5SRD1 257 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 ZNF385AQ96PM9 386 aaKnown RBP7.45□□□□□ -1.22
CSMD1-216ENST00000602557 TRAV21A0A0B4J279 112 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 LEPP41159 167 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 SCTP09683 121 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 IL11P20809 199 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 LCN2P80188 198 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 STPG3Q8N7X2 389 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 ZNF48Q96MX3 618 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-216ENST00000602557 GPR132Q9UNW8 380 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 C16orf97H3BN30 126 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 ZNF585BQ52M93 769 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 ZNF664Q8N3J9 261 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 PRDX2P32119 198 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 BTCP35070 178 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 STARD6P59095 220 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 GGTLC2Q14390 218 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 RRN3P1Q2M238 152 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 TMEM249Q2WGJ8 235 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 CCDC144NLQ6NUI1 221 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 CCL13Q99616 98 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 SS18L2Q9UHA2 77 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 FOXD3Q9UJU5 478 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-216ENST00000602557 C21orf140B9A014 251 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 SS18L1O75177 396 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-216ENST00000602557 ADRA2AP08913 450 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 C1orf194Q5T5A4 169 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 OR5AN1Q8NGI8 311 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 C16orf92Q96LL3 132 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 HEXA-AS1Q9H8Q6 139 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 C9orf172C9J069 976 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 LCN12Q6JVE5 192 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 IGHV3-72A0A0B4J1Y9 119 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 TMEM170BQ5T4T1 132 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 ZNF714Q96N38 554 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 TTTY12Q9BZ98 90 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 MRPS18AQ9NVS2 196 aaKnown RBP7.44□□□□□ -1.22
CSMD1-216ENST00000602557 IGKV3D-11A0A0A0MRZ8 115 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 RNF222A6NCQ9 220 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 IGKV3-11P04433 115 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 TMEM187Q14656 261 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 INO80CQ6PI98 192 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-216ENST00000602557 OR4X2Q8NGF9 303 aa7.44□□□□□ -1.22
CSMD1-216ENST00000602557 ANOS1P23352 680 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 ZBTB34Q8NCN2 500 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 OR4A5Q8NH83 315 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 LOC101059948A0A1B0GTJ6 334 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 BOD1L2Q8IYS8 172 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 RNASEH2CQ8TDP1 164 aaKnown RBP7.43□□□□□ -1.22
CSMD1-216ENST00000602557 IGHV3-48P01763 117 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 RLFQ13129 1914 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 hDV102S1A0JD36 115 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 GAGE12BA1L429 117 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 CCL21O00585 134 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 CD160O95971 181 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 WFDC12Q8WWY7 111 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 TRBV5-5A0A0J9YX44 114 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 TMEM250H0YL14 139 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 MEIG1Q5JSS6 88 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 NEUROG1Q92886 237 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 ZNF479Q96JC4 524 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 PRELID3AQ96N28 172 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 IGKV1-8A0A0C4DH67 115 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 FAM181BA6NEQ2 426 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 UMODP07911 640 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 CEACAM21Q3KPI0 293 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 MRAP2Q96G30 205 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 UBE2L6O14933 153 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 SLC25A53Q5H9E4 307 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 TUBA4BQ9H853 241 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 VENTXO95231 258 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 FAM53AQ6NSI3 398 aaPredicted RBP7.43□□□□□ -1.22
CSMD1-216ENST00000602557 DMRTC2Q8IXT2 367 aaPredicted RBP7.43□□□□□ -1.22
CSMD1-216ENST00000602557 OR10J6PQ8NGY7 276 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 WFDC6Q9BQY6 131 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 REG1AP05451 166 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 IL9P15248 144 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 LHFPL4Q7Z7J7 247 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 RTN4RL2Q86UN3 420 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 PGPEP1Q9NXJ5 209 aa7.43□□□□□ -1.22
CSMD1-216ENST00000602557 IGKV3D-15A0A087WSY6 115 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 IGKV3-15P01624 115 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 LRRC75BQ2VPJ9 315 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 GATAD1Q8WUU5 269 aa7.42□□□□□ -1.22
CSMD1-216ENST00000602557 PHLDA3Q9Y5J5 127 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms