RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 LCN15Q6UWW0 184 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 CYP2G1PQ6ZSU1 146 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 C11orf42Q8N5U0 333 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 CT45A3Q8NHU0 189 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 LEAP2Q969E1 77 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 LHX4Q969G2 390 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 R3HDM4Q96D70 268 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 ACTR3CQ9C0K3 210 aaPredicted RBP9.52□□□□□ -0.89
VRK3-223ENST00000601341 VSIRQ9H7M9 311 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 DSCAML1Q8TD84 2053 aa9.52□□□□□ -0.89
VRK3-223ENST00000601341 ABCA12Q86UK0 2595 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 FASNP49327 2511 aaKnown RBP9.51□□□□□ -0.89
VRK3-223ENST00000601341 TRBV24-1A0A075B6N3 115 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 IGHV4-30-2A0A087WSY4 118 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 SMCO3A2RU48 225 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 SEC14L6B5MCN3 397 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 CYB5BO43169 146 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 ENSAO43768 121 aaKnown RBP9.51□□□□□ -0.89
VRK3-223ENST00000601341 FOXH1O75593 365 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 OPN1MWP04001 364 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 OPN1MW2P0DN77 364 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 OPN1MW3P0DN78 364 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 SLC25A16P16260 332 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 ZFP36P26651 326 aaKnown RBP9.51□□□□□ -0.89
VRK3-223ENST00000601341 PSMB3P49720 205 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 FABP9Q0Z7S8 132 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 CLEC12BQ2HXU8 276 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 SLC25A48Q6ZT89 311 aaKnown RBP9.51□□□□□ -0.89
VRK3-223ENST00000601341 ZNF439Q8NDP4 499 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 MBD6Q96DN6 1003 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 TXNDC17Q9BRA2 123 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 NPCDR1Q9BY65 106 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 IFI27L2Q9H2X8 130 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 ONECUT1Q9UBC0 465 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 NAT8Q9UHE5 227 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 NAV2Q8IVL1 2488 aa9.51□□□□□ -0.89
VRK3-223ENST00000601341 A0A087X0M5 115 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 IGHV4-61A0A0C4DH41 118 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 A0A1B0GX30 115 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 CEBPZOSA8MTT3 80 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 M0R1W7 72 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 FGF7P21781 194 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 ERVK-16P61578 105 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 LCN2P80188 198 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 ACOT6Q3I5F7 207 aaPredicted RBP9.5□□□□□ -0.89
VRK3-223ENST00000601341 UTF1Q5T230 341 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 C1orf122Q6ZSJ8 110 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 C8orf31Q8N9H6 132 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 Q8WTZ3 238 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 ADTRPQ96IZ2 230 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 TMEM133Q9H2Q1 129 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 TMPRSS5Q9H3S3 457 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 KCNIP2Q9NS61 270 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 WDR83OSQ9Y284 106 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 POLQO75417 2590 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 A0A1W2PPE3 182 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 SLC31A2O15432 143 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 KBTBD11O94819 623 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 VENTXO95231 258 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 FBP1P09467 338 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 NQO2P16083 231 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 HOXA5P20719 270 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 RPS10P46783 165 aaKnown RBP9.5□□□□□ -0.89
VRK3-223ENST00000601341 GNG10P50151 68 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 ARF6P62330 175 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 ABHD12Q8N2K0 398 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 KIR3DL3Q8N743 410 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 OR10G9Q8NGN4 311 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 OR10G7Q8NGN6 311 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 OR9G1Q8NH87 305 aa9.5□□□□□ -0.89
VRK3-223ENST00000601341 DOCK11Q5JSL3 2073 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 C15orf62A8K5M9 175 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 ZNF727A8MUV8 499 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 FNDC10F2Z333 226 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 IGKV1D-33P01593 117 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 IGKV1-33P01594 117 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 USF1P22415 310 aaPredicted RBP9.49□□□□□ -0.89
VRK3-223ENST00000601341 CEBPGP53567 150 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 OR2B8PP59922 312 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 CD81P60033 236 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 PAX2Q02962 417 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 POU2AF1Q16633 256 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 NCR3LG1Q68D85 454 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 ACSM6Q6P461 480 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 BTNL3Q6UXE8 466 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 SSX7Q7RTT5 188 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 LYG1Q8N1E2 194 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 LINC00311Q8N616 119 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 OR4S2Q8NH73 311 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 ZNF596Q8TC21 504 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 DDB2Q92466 427 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 TNFRSF14Q92956 283 aa9.49□□□□□ -0.89
VRK3-223ENST00000601341 POLR3KQ9Y2Y1 108 aaPredicted RBP9.49□□□□□ -0.89
VRK3-223ENST00000601341 IGHV2-70DA0A0C4DH43 119 aa9.48□□□□□ -0.89
VRK3-223ENST00000601341 J3QR06 171 aa9.48□□□□□ -0.89
VRK3-223ENST00000601341 PROP1O75360 226 aa9.48□□□□□ -0.89
VRK3-223ENST00000601341 RBMXL2O75526 392 aaKnown RBP9.48□□□□□ -0.89
VRK3-223ENST00000601341 CD1BP29016 333 aa9.48□□□□□ -0.89
VRK3-223ENST00000601341 CDX1P47902 265 aaPredicted RBP9.48□□□□□ -0.89
VRK3-223ENST00000601341 ELLP55199 621 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms