RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 ZFAND1Q8TCF1 268 aa7.48□□□□□ -1.21
HIF3A-219ENST00000600879 DYNLRB2Q8TF09 96 aa7.48□□□□□ -1.21
HIF3A-219ENST00000600879 MRGPRFQ96AM1 343 aa7.48□□□□□ -1.21
HIF3A-219ENST00000600879 C5orf30Q96GV9 206 aa7.48□□□□□ -1.21
HIF3A-219ENST00000600879 SCGB3A2Q96PL1 93 aa7.48□□□□□ -1.21
HIF3A-219ENST00000600879 C14orf166Q9Y224 244 aaKnown RBP7.48□□□□□ -1.21
HIF3A-219ENST00000600879 H0YJW9 148 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 TNFSF12O43508 249 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 PROP1O75360 226 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 RBMXL2O75526 392 aaKnown RBP7.47□□□□□ -1.21
HIF3A-219ENST00000600879 CTSDP07339 412 aaPredicted RBP7.47□□□□□ -1.21
HIF3A-219ENST00000600879 PI3P19957 117 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 S100GP29377 79 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 GNRHRP30968 328 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 BTCP35070 178 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 MECP2P51608 486 aaKnown RBP7.47□□□□□ -1.21
HIF3A-219ENST00000600879 LINC00205P59089 165 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 PJVKQ0ZLH3 352 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 RBMS2Q15434 407 aaKnown RBP7.47□□□□□ -1.21
HIF3A-219ENST00000600879 SURF2Q15527 256 aaPredicted RBP7.47□□□□□ -1.21
HIF3A-219ENST00000600879 MSMO1Q15800 293 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 PHLDA2Q53GA4 152 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 CMTM1Q8IZ96 169 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 CCDC71LQ8N9Z2 235 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 OR2K2Q8NGT1 345 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 WDR89Q96FK6 387 aaPredicted RBP7.47□□□□□ -1.21
HIF3A-219ENST00000600879 ZNF486Q96H40 463 aaPredicted RBP7.47□□□□□ -1.21
HIF3A-219ENST00000600879 SLC25A21Q9BQT8 299 aaPredicted RBP7.47□□□□□ -1.21
HIF3A-219ENST00000600879 COA4Q9NYJ1 87 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 PEMTQ9UBM1 199 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 GPR132Q9UNW8 380 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 WASHC3Q9Y3C0 194 aa7.47□□□□□ -1.21
HIF3A-219ENST00000600879 FAM240BA0A1B0GVZ2 78 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 OR2A4O95047 310 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 IGLV2-14P01704 120 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 APOA2P02652 100 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 IGKV1-16P04430 117 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 RLN1P04808 185 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 DUTP33316 252 aaKnown RBP7.46□□□□□ -1.22
HIF3A-219ENST00000600879 RPS16P62249 146 aaKnown RBP7.46□□□□□ -1.22
HIF3A-219ENST00000600879 SSBP2P81877 361 aaPredicted RBP7.46□□□□□ -1.22
HIF3A-219ENST00000600879 CATR1Q13166 79 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 ZNF343Q6P1L6 599 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 ZNF66Q6ZN08 573 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 KCTD9Q7L273 389 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 LYG2Q86SG7 212 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 ENKURQ8TC29 256 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 TCTEX1D2Q8WW35 142 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 ADTRPQ96IZ2 230 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 GPHA2Q96T91 129 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 HSD17B10Q99714 261 aaKnown RBP7.46□□□□□ -1.22
HIF3A-219ENST00000600879 GGTLC1Q9BX51 225 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 COPZ2Q9P299 210 aa7.46□□□□□ -1.22
HIF3A-219ENST00000600879 KLK5Q9Y337 293 aaPredicted RBP7.46□□□□□ -1.22
HIF3A-219ENST00000600879 VPS13DQ5THJ4 4388 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 LINC00473A8K010 186 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 H3BUA1 57 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 BMPR1BO00238 502 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 PGLYRP1O75594 196 aaPredicted RBP7.45□□□□□ -1.22
HIF3A-219ENST00000600879 NDUFB6O95139 128 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 TCRBP04435 133 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 MC5RP33032 325 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 PIGPP57054 158 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 RND3P61587 244 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 RPL30P62888 115 aaKnown RBP7.45□□□□□ -1.22
HIF3A-219ENST00000600879 CBX3Q13185 183 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 EIF4EBP1Q13541 118 aaPredicted RBP7.45□□□□□ -1.22
HIF3A-219ENST00000600879 DEFB114Q30KQ6 69 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 OR2B11Q5JQS5 317 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 TMED4Q7Z7H5 227 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 TBC1D26Q86UD7 250 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 ZNF383Q8NA42 475 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 OR51H1Q8NH63 302 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 CACNG8Q8WXS5 425 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 RTBDNQ9BSG5 229 aaPredicted RBP7.45□□□□□ -1.22
HIF3A-219ENST00000600879 SLC2A9Q9NRM0 540 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 SLC35D1Q9NTN3 355 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 FLVCR2Q9UPI3 526 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 PRELID3BQ9Y3B1 194 aa7.45□□□□□ -1.22
HIF3A-219ENST00000600879 LOC102724200A0A096LPH7 203 aaPredicted RBP7.44□□□□□ -1.22
HIF3A-219ENST00000600879 TEX13DA0A0J9YY54 714 aaPredicted RBP7.44□□□□□ -1.22
HIF3A-219ENST00000600879 MPPED1O15442 326 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 FCGR3BO75015 233 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 HLA-AP01891 365 aaKnown RBP7.44□□□□□ -1.22
HIF3A-219ENST00000600879 PRH1P02810 166 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 FOLR2P14207 255 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 AKR1C4P17516 323 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 KIR2DS2P43631 304 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 LGALS7P47929 136 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 TAGLNQ01995 201 aaKnown RBP7.44□□□□□ -1.22
HIF3A-219ENST00000600879 EXOSC2Q13868 293 aaKnown RBP7.44□□□□□ -1.22
HIF3A-219ENST00000600879 RTL8BQ17RB0 113 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 LGALS9CQ6DKI2 356 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 NRARPQ7Z6K4 114 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 PDPNQ86YL7 162 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 CENPSQ8N2Z9 138 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 ADAD2Q8NCV1 583 aaKnown RBP7.44□□□□□ -1.22
HIF3A-219ENST00000600879 OR5AN1Q8NGI8 311 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 TSNAXQ99598 290 aaKnown RBP7.44□□□□□ -1.22
HIF3A-219ENST00000600879 PHB2Q99623 299 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms