RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 IMMP2LQ96T52 175 aa16.58■□□□□ 0.24
SHKBP1-225ENST00000600733 OR51B2Q9Y5P1 312 aa16.58■□□□□ 0.24
SHKBP1-225ENST00000600733 CEACAM4O75871 244 aa16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 ACTL6BO94805 426 aa16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 TIMP3P35625 211 aa16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 GATA4P43694 442 aa16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 TNFAIP6P98066 277 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 TEX38Q6PEX7 206 aa16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 MOB3BQ86TA1 216 aa16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 OR4P4Q8NGL7 312 aa16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 GAFA1Q96PS6 74 aa16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 DCAF16Q9NXF7 216 aa16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 IGHV1-46P01743 117 aa16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 IGKV1-16P04430 117 aa16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 ZNF664Q8N3J9 261 aa16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 TMEM18Q96B42 140 aa16.57■□□□□ 0.24
SHKBP1-225ENST00000600733 RPL29P47914 159 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 REC114Q7Z4M0 266 aa16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 NCOR1P1Q9H4R4 102 aa16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 K7EN84 100 aa16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 PRR20EP86478 221 aa16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 PRR20CP86479 221 aa16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 PRR20DP86480 221 aa16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 PRR20BP86481 221 aa16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 PRR20AP86496 221 aa16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 RAB31Q13636 194 aa16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 HLA-DRB5Q30154 266 aa16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 MIR17HGQ75NE6 70 aa16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 MRPL41Q8IXM3 137 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 GBGT1Q8N5D6 347 aa16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 RAB9BQ9NP90 201 aa16.56■□□□□ 0.24
SHKBP1-225ENST00000600733 DYSFO75923 2080 aa16.55■□□□□ 0.24
SHKBP1-225ENST00000600733 SRRM4A7MD48 611 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-225ENST00000600733 J3QR06 171 aa16.55■□□□□ 0.24
SHKBP1-225ENST00000600733 FAM27E3Q08E93 113 aa16.55■□□□□ 0.24
SHKBP1-225ENST00000600733 TMEM256Q8N2U0 113 aa16.55■□□□□ 0.24
SHKBP1-225ENST00000600733 OR10G8Q8NGN5 311 aa16.55■□□□□ 0.24
SHKBP1-225ENST00000600733 NEUROG1Q92886 237 aa16.55■□□□□ 0.24
SHKBP1-225ENST00000600733 LRFN3Q9BTN0 628 aa16.55■□□□□ 0.24
SHKBP1-225ENST00000600733 TP53TG5Q9Y2B4 290 aa16.55■□□□□ 0.24
SHKBP1-225ENST00000600733 SLC17A3O00476 420 aa16.54■□□□□ 0.24
SHKBP1-225ENST00000600733 GCGP01275 180 aa16.54■□□□□ 0.24
SHKBP1-225ENST00000600733 PAX1P15863 534 aa16.54■□□□□ 0.24
SHKBP1-225ENST00000600733 ADTRPQ96IZ2 230 aa16.54■□□□□ 0.24
SHKBP1-225ENST00000600733 LINC00869P0C866 280 aa16.54■□□□□ 0.24
SHKBP1-225ENST00000600733 CT45A6P0DMU7 189 aa16.54■□□□□ 0.24
SHKBP1-225ENST00000600733 CT45A5P0DMU8 189 aa16.54■□□□□ 0.24
SHKBP1-225ENST00000600733 CT45A7P0DMV0 189 aa16.54■□□□□ 0.24
SHKBP1-225ENST00000600733 PLEKHA3Q9HB20 300 aa16.54■□□□□ 0.24
SHKBP1-225ENST00000600733 IL19Q9UHD0 177 aa16.54■□□□□ 0.24
SHKBP1-225ENST00000600733 IGKV1OR2-108A0A075B7D4 117 aa16.53■□□□□ 0.24
SHKBP1-225ENST00000600733 POU2AF1Q16633 256 aa16.53■□□□□ 0.24
SHKBP1-225ENST00000600733 RND1Q92730 232 aa16.53■□□□□ 0.24
SHKBP1-225ENST00000600733 PRNDQ9UKY0 176 aa16.53■□□□□ 0.24
SHKBP1-225ENST00000600733 ROS1P08922 2347 aa16.53■□□□□ 0.24
SHKBP1-225ENST00000600733 MKRN2OSH3BPM6 223 aa16.53■□□□□ 0.24
SHKBP1-225ENST00000600733 NUPR1O60356 82 aa16.53■□□□□ 0.24
SHKBP1-225ENST00000600733 GATA2P23769 480 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-225ENST00000600733 ADMP35318 185 aa16.53■□□□□ 0.24
SHKBP1-225ENST00000600733 C1orf185Q5T7R7 199 aa16.53■□□□□ 0.24
SHKBP1-225ENST00000600733 ZNF788Q6ZQV5 615 aa16.53■□□□□ 0.24
SHKBP1-225ENST00000600733 BTF3L4Q96K17 158 aa16.53■□□□□ 0.24
SHKBP1-225ENST00000600733 SELENOVP59797 346 aa16.52■□□□□ 0.24
SHKBP1-225ENST00000600733 PRCDQ00LT1 54 aa16.52■□□□□ 0.24
SHKBP1-225ENST00000600733 SLC35D1Q9NTN3 355 aa16.52■□□□□ 0.24
SHKBP1-225ENST00000600733 A8MWP6 167 aa16.52■□□□□ 0.23
SHKBP1-225ENST00000600733 UPK2O00526 184 aa16.52■□□□□ 0.23
SHKBP1-225ENST00000600733 MT-CO2P00403 227 aa16.52■□□□□ 0.23
SHKBP1-225ENST00000600733 SLC25A48Q6ZT89 311 aaKnown RBP16.52■□□□□ 0.23
SHKBP1-225ENST00000600733 C11orf52Q96A22 123 aa16.52■□□□□ 0.23
SHKBP1-225ENST00000600733 RPUSD1Q9UJJ7 312 aaKnown RBP16.52■□□□□ 0.23
SHKBP1-225ENST00000600733 SLC45A2Q9UMX9 530 aa16.52■□□□□ 0.23
SHKBP1-225ENST00000600733 ARFGEF3Q5TH69 2177 aa16.51■□□□□ 0.23
SHKBP1-225ENST00000600733 GRIFINA4D1Z8 144 aa16.51■□□□□ 0.23
SHKBP1-225ENST00000600733 CBLN1P23435 193 aa16.51■□□□□ 0.23
SHKBP1-225ENST00000600733 ZNF90Q03938 601 aa16.51■□□□□ 0.23
SHKBP1-225ENST00000600733 PSG5Q15238 335 aa16.51■□□□□ 0.23
SHKBP1-225ENST00000600733 MLANAQ16655 118 aa16.51■□□□□ 0.23
SHKBP1-225ENST00000600733 C3orf36Q3SXR2 165 aa16.51■□□□□ 0.23
SHKBP1-225ENST00000600733 NABP2Q9BQ15 211 aa16.51■□□□□ 0.23
SHKBP1-225ENST00000600733 AKAP13Q12802 2813 aa16.51■□□□□ 0.23
SHKBP1-225ENST00000600733 ATMQ13315 3056 aa16.51■□□□□ 0.23
SHKBP1-225ENST00000600733 K7EM74 188 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 OR4A8P0C604 315 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 CCKARP32238 428 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 CCL8P80075 99 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 EAF1Q96JC9 268 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 UHRF2Q96PU4 802 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 TEX50A0A1B0GTY4 177 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 A0A1B0GV90 55 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 NDUFB7P17568 137 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 CD40P25942 277 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 OR5I1Q13606 314 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 SSX2Q16385 188 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 RTL8BQ17RB0 113 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 ZNF600Q6ZNG1 722 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 LINC00574Q9H8X3 128 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 ZNF257Q9Y2Q1 563 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 ADGRG4Q8IZF6 3080 aa16.5■□□□□ 0.23
SHKBP1-225ENST00000600733 SAA1P0DJI8 122 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms