RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 SLC35G3Q8N808 338 aa15.08■□□□□ 0
UPF1-209ENST00000600310 LRTM2Q8N967 370 aa15.08■□□□□ 0
UPF1-209ENST00000600310 NDUFA4L2Q9NRX3 87 aa15.08■□□□□ 0
UPF1-209ENST00000600310 SHPKQ9UHJ6 478 aa15.08■□□□□ 0
UPF1-209ENST00000600310 ZNF257Q9Y2Q1 563 aa15.08■□□□□ 0
UPF1-209ENST00000600310 IGLC7A0M8Q6 106 aa15.07■□□□□ 0
UPF1-209ENST00000600310 C9orf170A2RU37 121 aa15.07■□□□□ 0
UPF1-209ENST00000600310 NPIPB5A8MRT5 1133 aa15.07■□□□□ 0
UPF1-209ENST00000600310 OR4E1P0C645 316 aa15.07■□□□□ 0
UPF1-209ENST00000600310 CDX1P47902 265 aaPredicted RBP15.07■□□□□ 0
UPF1-209ENST00000600310 DEFA1P59665 94 aa15.07■□□□□ 0
UPF1-209ENST00000600310 DEFA3P59666 94 aa15.07■□□□□ 0
UPF1-209ENST00000600310 Q6ZRM9 215 aa15.07■□□□□ 0
UPF1-209ENST00000600310 ZNF429Q86V71 674 aa15.07■□□□□ 0
UPF1-209ENST00000600310 CASTOR1Q8WTX7 329 aa15.07■□□□□ 0
UPF1-209ENST00000600310 GPR146Q96CH1 333 aa15.07■□□□□ 0
UPF1-209ENST00000600310 SLA2Q9H6Q3 261 aa15.07■□□□□ 0
UPF1-209ENST00000600310 NUDT15Q9NV35 164 aa15.07■□□□□ 0
UPF1-209ENST00000600310 TRAV6A0A075B6T7 132 aa15.06■□□□□ 0
UPF1-209ENST00000600310 DUXBA0A1W2PPF3 345 aa15.06■□□□□ 0
UPF1-209ENST00000600310 A0A1W2PRX2 142 aa15.06■□□□□ 0
UPF1-209ENST00000600310 RBMXL2O75526 392 aaKnown RBP15.06■□□□□ 0
UPF1-209ENST00000600310 HLA-AP01891 365 aaKnown RBP15.06■□□□□ 0
UPF1-209ENST00000600310 CRYGCP07315 174 aa15.06■□□□□ 0
UPF1-209ENST00000600310 AREGP15514 252 aa15.06■□□□□ 0
UPF1-209ENST00000600310 PSMB6P28072 239 aa15.06■□□□□ 0
UPF1-209ENST00000600310 RAB25P57735 213 aa15.06■□□□□ 0
UPF1-209ENST00000600310 HSPE1P61604 102 aaKnown RBP15.06■□□□□ 0
UPF1-209ENST00000600310 DHRS2Q13268 280 aa15.06■□□□□ 0
UPF1-209ENST00000600310 LYZL2Q7Z4W2 148 aa15.06■□□□□ 0
UPF1-209ENST00000600310 HSD17B13Q7Z5P4 300 aaPredicted RBP15.06■□□□□ 0
UPF1-209ENST00000600310 LYG2Q86SG7 212 aa15.06■□□□□ 0
UPF1-209ENST00000600310 ZNF491Q8N8L2 437 aa15.06■□□□□ 0
UPF1-209ENST00000600310 ENKURQ8TC29 256 aa15.06■□□□□ 0
UPF1-209ENST00000600310 MS4A10Q96PG2 267 aa15.06■□□□□ 0
UPF1-209ENST00000600310 ZNF355PQ9NSJ1 428 aa15.06■□□□□ 0
UPF1-209ENST00000600310 COA4Q9NYJ1 87 aa15.06■□□□□ 0
UPF1-209ENST00000600310 TENM1Q9UKZ4 2725 aa15.05■□□□□ 0
UPF1-209ENST00000600310 TRGV3P03979 118 aa15.05■□□□□ -0
UPF1-209ENST00000600310 H2AFB2P0C5Z0 115 aa15.05■□□□□ -0
UPF1-209ENST00000600310 CTRB1P17538 263 aa15.05■□□□□ -0
UPF1-209ENST00000600310 MECP2P51608 486 aaKnown RBP15.05■□□□□ -0
UPF1-209ENST00000600310 TPPP2P59282 170 aa15.05■□□□□ -0
UPF1-209ENST00000600310 C4orf46Q504U0 113 aa15.05■□□□□ -0
UPF1-209ENST00000600310 NMSQ5H8A3 153 aa15.05■□□□□ -0
UPF1-209ENST00000600310 CTRB2Q6GPI1 263 aa15.05■□□□□ -0
UPF1-209ENST00000600310 C18orf65Q6ZTR6 163 aa15.05■□□□□ -0
UPF1-209ENST00000600310 DUSP18Q8NEJ0 188 aa15.05■□□□□ -0
UPF1-209ENST00000600310 OR10W1Q8NGF6 305 aa15.05■□□□□ -0
UPF1-209ENST00000600310 UBE2E2Q96LR5 201 aa15.05■□□□□ -0
UPF1-209ENST00000600310 HINT2Q9BX68 163 aa15.05■□□□□ -0
UPF1-209ENST00000600310 CACNG5Q9UF02 275 aa15.05■□□□□ -0
UPF1-209ENST00000600310 TET2Q6N021 2002 aaPredicted RBP15.05■□□□□ -0
UPF1-209ENST00000600310 ST8SIA3O43173 380 aa15.04■□□□□ -0
UPF1-209ENST00000600310 DUS4LO95620 317 aaKnown RBP15.04■□□□□ -0
UPF1-209ENST00000600310 PRCDQ00LT1 54 aa15.04■□□□□ -0
UPF1-209ENST00000600310 AARDQ4LEZ3 155 aa15.04■□□□□ -0
UPF1-209ENST00000600310 NRARPQ7Z6K4 114 aa15.04■□□□□ -0
UPF1-209ENST00000600310 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.04■□□□□ -0
UPF1-209ENST00000600310 NUDT19A8MXV4 375 aa15.03■□□□□ -0
UPF1-209ENST00000600310 TSPAN15O95858 294 aa15.03■□□□□ -0
UPF1-209ENST00000600310 WT1-ASQ06250 92 aa15.03■□□□□ -0
UPF1-209ENST00000600310 KLK9Q2XQG4 91 aa15.03■□□□□ -0
UPF1-209ENST00000600310 KLHL30-AS1Q8NEE0 82 aa15.03■□□□□ -0
UPF1-209ENST00000600310 OR4F17Q8NGA8 305 aa15.03■□□□□ -0
UPF1-209ENST00000600310 COQ8AQ8NI60 647 aa15.03■□□□□ -0
UPF1-209ENST00000600310 C4orf3Q8WVX3 66 aa15.03■□□□□ -0
UPF1-209ENST00000600310 OR4F4Q96R69 305 aa15.03■□□□□ -0
UPF1-209ENST00000600310 KLK9Q9UKQ9 250 aa15.03■□□□□ -0
UPF1-209ENST00000600310 TRBV9A0A0B4J1U6 114 aa15.02■□□□□ -0
UPF1-209ENST00000600310 DHFRP00374 187 aa15.02■□□□□ -0
UPF1-209ENST00000600310 PRH1P02810 166 aa15.02■□□□□ -0
UPF1-209ENST00000600310 REG1AP05451 166 aa15.02■□□□□ -0
UPF1-209ENST00000600310 SULT1A3P0DMM9 295 aa15.02■□□□□ -0
UPF1-209ENST00000600310 SULT1A4P0DMN0 295 aa15.02■□□□□ -0
UPF1-209ENST00000600310 OR13C7P0DN81 318 aa15.02■□□□□ -0
UPF1-209ENST00000600310 PRR31Q5SQ13 230 aa15.02■□□□□ -0
UPF1-209ENST00000600310 MRPL41Q8IXM3 137 aaKnown RBP15.02■□□□□ -0
UPF1-209ENST00000600310 OR52E5Q8NH55 327 aa15.02■□□□□ -0
UPF1-209ENST00000600310 PDCD10Q9BUL8 212 aa15.02■□□□□ -0
UPF1-209ENST00000600310 GNB4Q9HAV0 340 aa15.02■□□□□ -0
UPF1-209ENST00000600310 TMED3Q9Y3Q3 217 aa15.02■□□□□ -0
UPF1-209ENST00000600310 A0A1B0GU03 582 aa15.01□□□□□ -0.01
UPF1-209ENST00000600310 IFNA17P01571 189 aa15.01□□□□□ -0.01
UPF1-209ENST00000600310 SMCO1Q147U7 214 aa15.01□□□□□ -0.01
UPF1-209ENST00000600310 C19orf35Q6ZS72 473 aa15.01□□□□□ -0.01
UPF1-209ENST00000600310 C8orf86Q6ZUL3 223 aa15.01□□□□□ -0.01
UPF1-209ENST00000600310 OR52B4Q8NGK2 314 aa15.01□□□□□ -0.01
UPF1-209ENST00000600310 MITD1Q8WV92 249 aa15.01□□□□□ -0.01
UPF1-209ENST00000600310 USMG5Q96IX5 58 aa15.01□□□□□ -0.01
UPF1-209ENST00000600310 FANCD2OSQ96PS1 177 aa15.01□□□□□ -0.01
UPF1-209ENST00000600310 PLEKHA3Q9HB20 300 aa15.01□□□□□ -0.01
UPF1-209ENST00000600310 PALMDQ9NP74 551 aa15.01□□□□□ -0.01
UPF1-209ENST00000600310 CACFD1Q9UGQ2 172 aa15.01□□□□□ -0.01
UPF1-209ENST00000600310 A0A0G2JLM5 398 aa15□□□□□ -0.01
UPF1-209ENST00000600310 FAM223BA6NKX1 122 aa15□□□□□ -0.01
UPF1-209ENST00000600310 INS-IGF2F8WCM5 200 aa15□□□□□ -0.01
UPF1-209ENST00000600310 IL5P05113 134 aa15□□□□□ -0.01
UPF1-209ENST00000600310 SLC25A6P12236 298 aa15□□□□□ -0.01
UPF1-209ENST00000600310 DEFA4P12838 97 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms