RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 CT45A5P0DMU8 189 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 CT45A7P0DMV0 189 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 ST6GALNAC6Q969X2 333 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 PINX1Q96BK5 328 aaKnown RBP12.31□□□□□ -0.44
VRK3-218ENST00000600031 CLEC7AQ9BXN2 247 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 GSN-AS1Q9NRJ2 163 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 GNG13Q9P2W3 67 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 WNK2Q9Y3S1 2297 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 KRASP01116 189 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 IGLV1-47P01700 117 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 BCL2P10415 239 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 IAPPP10997 89 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 S100PP25815 95 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 G6PCP35575 357 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 REG1BP48304 166 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 THBS3P49746 956 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 OR13D1Q8NGV5 346 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 Q8WTZ3 238 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 RSG1Q9BU20 258 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 TMEM242Q9NWH2 141 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 MMP24Q9Y5R2 645 aa12.31□□□□□ -0.44
VRK3-218ENST00000600031 IGHV2-70DA0A0C4DH43 119 aa12.3□□□□□ -0.44
VRK3-218ENST00000600031 TGOLN2O43493 480 aa12.3□□□□□ -0.44
VRK3-218ENST00000600031 METTL15P1P0C7V9 234 aa12.3□□□□□ -0.44
VRK3-218ENST00000600031 ZNF137PP52743 207 aa12.3□□□□□ -0.44
VRK3-218ENST00000600031 CLEC12BQ2HXU8 276 aa12.3□□□□□ -0.44
VRK3-218ENST00000600031 ZNF674Q2M3X9 581 aa12.3□□□□□ -0.44
VRK3-218ENST00000600031 LILRB2Q8N423 598 aa12.3□□□□□ -0.44
VRK3-218ENST00000600031 PNKDQ8N490 385 aa12.3□□□□□ -0.44
VRK3-218ENST00000600031 ADTRPQ96IZ2 230 aa12.3□□□□□ -0.44
VRK3-218ENST00000600031 MRPL20Q9BYC9 149 aaKnown RBP12.3□□□□□ -0.44
VRK3-218ENST00000600031 LPAR2Q9HBW0 351 aa12.3□□□□□ -0.44
VRK3-218ENST00000600031 FOXH1O75593 365 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 IFNA1P01562 189 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 CXCL1P09341 107 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 PRTN3P24158 256 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 CDX1P47902 265 aaPredicted RBP12.29□□□□□ -0.44
VRK3-218ENST00000600031 PRRX1P54821 245 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 DSCR9P59020 149 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 ARL16Q0P5N6 197 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 PMS2P11Q13670 270 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 HLA-DRB5Q30154 266 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 TMEM41BQ5BJD5 291 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 FAM90A2PQ658T7 463 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 KIR3DL3Q8N743 410 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 TNFRSF14Q92956 283 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 TMEM186Q96B77 213 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 MAP1AP78559 2803 aaPredicted RBP12.29□□□□□ -0.44
VRK3-218ENST00000600031 ABCA2Q9BZC7 2435 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 APCP25054 2843 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 RBFOX2O43251 390 aaKnown RBP eCLIP12.29□□□□□ -0.44
VRK3-218ENST00000600031 HPRT1P00492 218 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 P0C879 139 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 KIR2DS2P43631 304 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 RAB11AP62491 216 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 KLRD1Q13241 179 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 HCP5Q6MZN7 132 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 C1orf122Q6ZSJ8 110 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 HAPLN4Q86UW8 402 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 BEND2Q8NDZ0 799 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 WDR61Q9GZS3 305 aaKnown RBP12.29□□□□□ -0.44
VRK3-218ENST00000600031 VAX2Q9UIW0 290 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 TIMM9Q9Y5J7 89 aa12.29□□□□□ -0.44
VRK3-218ENST00000600031 GCN1Q92616 2671 aaKnown RBP12.29□□□□□ -0.44
VRK3-218ENST00000600031 ZFP92A6NM28 416 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 ZNF726P1Q15940 193 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 FAM71F2Q6NXP2 309 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 ZNF343Q6P1L6 599 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 OR4P4Q8NGL7 312 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 BUB1B-PAK6H3BSN5 160 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 RND2P52198 227 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 DEFB113Q30KQ7 82 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 SPANXN5Q5MJ07 72 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 LCN15Q6UWW0 184 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 VMO1Q7Z5L0 202 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 OR4S2Q8NH73 311 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 R3HDM4Q96D70 268 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 RCC1LQ96I51 464 aaKnown RBP12.28□□□□□ -0.44
VRK3-218ENST00000600031 NABP2Q9BQ15 211 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 SIRPDQ9H106 197 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 VSIRQ9H7M9 311 aa12.28□□□□□ -0.44
VRK3-218ENST00000600031 BEX4Q9NWD9 120 aaPredicted RBP12.28□□□□□ -0.44
VRK3-218ENST00000600031 POLR3KQ9Y2Y1 108 aaPredicted RBP12.28□□□□□ -0.44
VRK3-218ENST00000600031 MARCH11A6NNE9 402 aa12.27□□□□□ -0.45
VRK3-218ENST00000600031 LINC00587B1AMM8 73 aa12.27□□□□□ -0.45
VRK3-218ENST00000600031 CLDN34H7C241 214 aa12.27□□□□□ -0.45
VRK3-218ENST00000600031 IL3RAP26951 378 aa12.27□□□□□ -0.45
VRK3-218ENST00000600031 NDUFA6P56556 154 aa12.27□□□□□ -0.45
VRK3-218ENST00000600031 ATP6V1FQ16864 119 aa12.27□□□□□ -0.45
VRK3-218ENST00000600031 VKORC1L1Q8N0U8 176 aa12.27□□□□□ -0.45
VRK3-218ENST00000600031 OR11H6Q8NGC7 330 aa12.27□□□□□ -0.45
VRK3-218ENST00000600031 TAF15Q92804 592 aaKnown RBP eCLIP12.27□□□□□ -0.45
VRK3-218ENST00000600031 OR4C12Q96R67 309 aa12.27□□□□□ -0.45
VRK3-218ENST00000600031 SLC35D1Q9NTN3 355 aa12.27□□□□□ -0.45
VRK3-218ENST00000600031 DOK5Q9P104 306 aa12.27□□□□□ -0.45
VRK3-218ENST00000600031 SVEP1Q4LDE5 3571 aa12.27□□□□□ -0.45
VRK3-218ENST00000600031 TGIF2-C20orf24A0A0A6YYL0 155 aa12.26□□□□□ -0.45
VRK3-218ENST00000600031 H0YJW9 148 aa12.26□□□□□ -0.45
VRK3-218ENST00000600031 IGKV1-16P04430 117 aa12.26□□□□□ -0.45
VRK3-218ENST00000600031 SLC38A11Q08AI6 406 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms