RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 CD81P60033 236 aa11.7□□□□□ -0.54
VRK3-217ENST00000599538 GGACTQ9BVM4 153 aa11.7□□□□□ -0.54
VRK3-217ENST00000599538 ACTR3CQ9C0K3 210 aaPredicted RBP11.7□□□□□ -0.54
VRK3-217ENST00000599538 C19orf84I3L1E1 186 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 COX7A1P24310 79 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 FAM71F2Q6NXP2 309 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 PDPNQ86YL7 162 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 IQCF2Q8IXL9 164 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 ITLN2Q8WWU7 325 aaPredicted RBP11.69□□□□□ -0.54
VRK3-217ENST00000599538 VAX2Q9UIW0 290 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 WASHC3Q9Y3C0 194 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 SVEP1Q4LDE5 3571 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 A0A1W2PPH5 198 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 ZNF727A8MUV8 499 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 FSTL3O95633 263 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 CRYBA1P05813 215 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 CDC34P49427 236 aaPredicted RBP11.69□□□□□ -0.54
VRK3-217ENST00000599538 RPL8P62917 257 aaKnown RBP11.69□□□□□ -0.54
VRK3-217ENST00000599538 MRGPRG-AS1Q2M3A8 158 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 HLA-DRB5Q30154 266 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 ACOT6Q3I5F7 207 aaPredicted RBP11.69□□□□□ -0.54
VRK3-217ENST00000599538 OR5B3Q8NH48 314 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 NPVFQ9HCQ7 196 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 NDUFA4L2Q9NRX3 87 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 PXMP4Q9Y6I8 212 aa11.69□□□□□ -0.54
VRK3-217ENST00000599538 ENSAO43768 121 aaKnown RBP11.68□□□□□ -0.54
VRK3-217ENST00000599538 SLC25A17O43808 307 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 RNASE2P10153 161 aaKnown RBP11.68□□□□□ -0.54
VRK3-217ENST00000599538 IGFBP2P18065 325 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 CNTFRP26992 372 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 CDKN1AP38936 164 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 OPRK1P41145 380 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 RHEBQ15382 184 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 LDLRAD2Q5SZI1 272 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 OR8B3Q8NGG8 313 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 TMEM167AQ8TBQ9 72 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 IGFBPL1Q8WX77 278 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 OR8B2Q96RD0 313 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 ZNF430Q9H8G1 570 aaPredicted RBP11.68□□□□□ -0.54
VRK3-217ENST00000599538 ACACBO00763 2458 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 CSMD1Q96PZ7 3565 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 IGKV1OR2-108A0A075B7D4 117 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 MPDU1O75352 247 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 BSXQ3C1V8 233 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 SMUG1Q53HV7 270 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 HIST1H2BAQ96A08 127 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 NEIL1Q96FI4 390 aaPredicted RBP11.68□□□□□ -0.54
VRK3-217ENST00000599538 COMMD5Q9GZQ3 224 aa11.68□□□□□ -0.54
VRK3-217ENST00000599538 UNKLQ9H9P5 680 aaKnown RBP11.68□□□□□ -0.54
VRK3-217ENST00000599538 IGSF10Q6WRI0 2623 aa11.67□□□□□ -0.54
VRK3-217ENST00000599538 SEC14L6B5MCN3 397 aa11.67□□□□□ -0.54
VRK3-217ENST00000599538 BUB1B-PAK6H3BSN5 160 aa11.67□□□□□ -0.54
VRK3-217ENST00000599538 CYB5BO43169 146 aa11.67□□□□□ -0.54
VRK3-217ENST00000599538 MEF2BQ02080 365 aaPredicted RBP11.67□□□□□ -0.54
VRK3-217ENST00000599538 WT1-ASQ06250 92 aa11.67□□□□□ -0.54
VRK3-217ENST00000599538 C8orf46Q8TAG6 207 aa11.67□□□□□ -0.54
VRK3-217ENST00000599538 NIPSNAP3BQ9BS92 247 aa11.67□□□□□ -0.54
VRK3-217ENST00000599538 FKBP11Q9NYL4 201 aa11.67□□□□□ -0.54
VRK3-217ENST00000599538 ONECUT1Q9UBC0 465 aa11.67□□□□□ -0.54
VRK3-217ENST00000599538 PAGE4O60829 102 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 USF1P22415 310 aaPredicted RBP11.66□□□□□ -0.54
VRK3-217ENST00000599538 PAX6P26367 422 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 TAGLN2P37802 199 aaKnown RBP11.66□□□□□ -0.54
VRK3-217ENST00000599538 PMS2P11Q13670 270 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 TEPPQ6URK8 271 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 DTX2Q86UW9 622 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 FAM24BQ8N5W8 94 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 OR4P4Q8NGL7 312 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 PCGF1Q9BSM1 259 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 CLEC7AQ9BXN2 247 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 SIRT7Q9NRC8 400 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 MIOXQ9UGB7 285 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 B2MP61769 119 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 ARF6P62330 175 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 C4orf17Q53FE4 359 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 C2orf83Q53S99 150 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 SPATA31B1PQ5VZV4 182 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 ZFP82Q8N141 532 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 PNKDQ8N490 385 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 STPG3Q8N7X2 389 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 C15orf54Q8N8G6 183 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 LY6G5BQ8NDX9 201 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 OR1L8Q8NGR8 309 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 ABHD5Q8WTS1 349 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 TVP23CQ96ET8 276 aa11.66□□□□□ -0.54
VRK3-217ENST00000599538 WNK2Q9Y3S1 2297 aa11.65□□□□□ -0.54
VRK3-217ENST00000599538 IGHV1-3A0A0C4DH29 117 aa11.65□□□□□ -0.54
VRK3-217ENST00000599538 IFNA1P01562 189 aa11.65□□□□□ -0.54
VRK3-217ENST00000599538 GATA2P23769 480 aaPredicted RBP11.65□□□□□ -0.54
VRK3-217ENST00000599538 RAB13P51153 203 aa11.65□□□□□ -0.54
VRK3-217ENST00000599538 GAMTQ14353 236 aa11.65□□□□□ -0.54
VRK3-217ENST00000599538 RBMS3Q6XE24 437 aaKnown RBP11.65□□□□□ -0.54
VRK3-217ENST00000599538 SLC35E3Q7Z769 313 aa11.65□□□□□ -0.54
VRK3-217ENST00000599538 RAB1CQ92928 201 aa11.65□□□□□ -0.54
VRK3-217ENST00000599538 P2RX4Q99571 388 aa11.65□□□□□ -0.54
VRK3-217ENST00000599538 SEPSECSQ9HD40 501 aaKnown RBP11.65□□□□□ -0.54
VRK3-217ENST00000599538 hCG_1809904A0A1W2PP81 198 aa11.65□□□□□ -0.55
VRK3-217ENST00000599538 A0A1W2PPV4 95 aa11.65□□□□□ -0.55
VRK3-217ENST00000599538 A0A1W2PR64 198 aa11.65□□□□□ -0.55
VRK3-217ENST00000599538 A0A1W2PRV1 198 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms