RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 LINC00614P0C842 121 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 HTN3P15516 51 aa10.01□□□□□ -0.81
SCN8A-208ENST00000599343 H7C1H1 209 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 ATP5LO75964 103 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 SAA1P0DJI8 122 aaPredicted RBP10□□□□□ -0.81
SCN8A-208ENST00000599343 LEPP41159 167 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 EIF4EBP2Q13542 120 aaPredicted RBP10□□□□□ -0.81
SCN8A-208ENST00000599343 GFI1BQ5VTD9 330 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 CLEC19AQ6UXS0 136 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 DERL1Q9BUN8 251 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 PRB3Q04118 309 aaPredicted RBP10□□□□□ -0.81
SCN8A-208ENST00000599343 OR52E5Q8NH55 327 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 MBD3L1Q8WWY6 194 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 TUBA4BQ9H853 241 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 SHISA3A0PJX4 238 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 H3BUT2 72 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 LRTM2Q8N967 370 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 SAP25Q8TEE9 199 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 FMC1Q96HJ9 113 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 SPTA1P02549 2419 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 CCDC88CQ9P219 2028 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 GNG5P63218 68 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 NPFFR1Q9GZQ6 430 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 TMEM106BQ9NUM4 274 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 PRR19A6NJB7 356 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 TIAF1O95411 115 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 OR13A1Q8NGR1 328 aa10□□□□□ -0.81
SCN8A-208ENST00000599343 GLI3P10071 1580 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 H3BRM9 83 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 CELA3AP09093 270 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 RFPL3SP0C7P2 107 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 FAM216BQ8N7L0 139 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 FAM181AQ8N9Y4 354 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 CARHSP1Q9Y2V2 147 aaKnown RBP9.99□□□□□ -0.81
SCN8A-208ENST00000599343 SMIM10L1P0DMW3 83 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 ZNF362Q5T0B9 420 aaPredicted RBP9.99□□□□□ -0.81
SCN8A-208ENST00000599343 C19orf48Q6RUI8 117 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 SMIM10Q96HG1 83 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 RTBDNQ9BSG5 229 aaPredicted RBP9.99□□□□□ -0.81
SCN8A-208ENST00000599343 Q9H3A6 140 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 CLDN16Q9Y5I7 305 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 IGKV1D-43A0A0B4J1Z2 117 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 A0A1W2PRX2 142 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 TDGF1P13385 188 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 FER1L6-AS1Q8NA97 138 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 GLMPQ8WWB7 406 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 LINC01587Q99440 93 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 SSBP4Q9BWG4 385 aaPredicted RBP9.99□□□□□ -0.81
SCN8A-208ENST00000599343 C19orf67A6NJJ6 358 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 CNTFRP26992 372 aa9.99□□□□□ -0.81
SCN8A-208ENST00000599343 REPIN1Q9BWE0 567 aaKnown RBP9.99□□□□□ -0.81
SCN8A-208ENST00000599343 MCM3APO60318 1980 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 TMEM30BQ3MIR4 351 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 PPP1R27Q86WC6 154 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 MRPL20Q9BYC9 149 aaKnown RBP9.98□□□□□ -0.81
SCN8A-208ENST00000599343 RNASE7Q9H1E1 156 aaKnown RBP9.98□□□□□ -0.81
SCN8A-208ENST00000599343 ASXL3Q9C0F0 2248 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 LOC390937A0A1W2PQ73 354 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 B9A039 149 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 FOXH1O75593 365 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 TMEM50AO95807 157 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 ATRAIDQ6UW56 229 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 FNDC4Q9H6D8 234 aaPredicted RBP9.98□□□□□ -0.81
SCN8A-208ENST00000599343 PILRBQ9UKJ0 227 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 DOCK5Q9H7D0 1870 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 CABIN1Q9Y6J0 2220 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 LY75O60449 1722 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 TRAV8-2A0A0B4J237 113 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 IZUMO1RA6ND01 250 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 ZNF815PA8K554 130 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 PRB4P10163 310 aaPredicted RBP9.98□□□□□ -0.81
SCN8A-208ENST00000599343 ADMP35318 185 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 STARD6P59095 220 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 FAM27E3Q08E93 113 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 CTHRC1Q96CG8 243 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 HIGD1CA8MV81 97 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 NUTF2P61970 127 aaKnown RBP9.98□□□□□ -0.81
SCN8A-208ENST00000599343 TEX29Q8N6K0 151 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 SERF1AO75920 110 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 SP7Q8TDD2 431 aaPredicted RBP9.98□□□□□ -0.81
SCN8A-208ENST00000599343 KIAA1217Q5T5P2 1943 aa9.98□□□□□ -0.81
SCN8A-208ENST00000599343 ADAMTSL1Q8N6G6 1762 aa9.97□□□□□ -0.81
SCN8A-208ENST00000599343 RBMY1BA6NDE4 496 aaKnown RBP9.97□□□□□ -0.81
SCN8A-208ENST00000599343 RBMY1EA6NEQ0 496 aaKnown RBP9.97□□□□□ -0.81
SCN8A-208ENST00000599343 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.97□□□□□ -0.81
SCN8A-208ENST00000599343 TBX6O95947 436 aaPredicted RBP9.97□□□□□ -0.81
SCN8A-208ENST00000599343 IGHV3-11P01762 117 aa9.97□□□□□ -0.81
SCN8A-208ENST00000599343 RBMY1DP0C7P1 496 aaKnown RBP9.97□□□□□ -0.81
SCN8A-208ENST00000599343 RBMY1A1P0DJD3 496 aaKnown RBP9.97□□□□□ -0.81
SCN8A-208ENST00000599343 RBMY1CP0DJD4 496 aa9.97□□□□□ -0.81
SCN8A-208ENST00000599343 SIGLEC12Q96PQ1 595 aa9.97□□□□□ -0.81
SCN8A-208ENST00000599343 SDF2L1Q9HCN8 221 aa9.97□□□□□ -0.81
SCN8A-208ENST00000599343 C21orf62Q9NYP8 219 aa9.97□□□□□ -0.81
SCN8A-208ENST00000599343 USP54Q70EL1 1684 aa9.97□□□□□ -0.81
SCN8A-208ENST00000599343 CFAP161Q6P656 301 aa9.97□□□□□ -0.81
SCN8A-208ENST00000599343 ARPC1AQ92747 370 aa9.97□□□□□ -0.81
SCN8A-208ENST00000599343 OR10J3Q5JRS4 329 aa9.97□□□□□ -0.81
SCN8A-208ENST00000599343 STRCQ7RTU9 1775 aa9.97□□□□□ -0.81
SCN8A-208ENST00000599343 APOBEC3AP31941 199 aaPredicted RBP9.97□□□□□ -0.81
SCN8A-208ENST00000599343 ORMDL3Q8N138 153 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms