RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 FAM212BQ9NTI7 297 aaPredicted RBP11.54□□□□□ -0.56
TGFB1-202ENST00000597453 BET1LQ9NYM9 111 aa11.54□□□□□ -0.56
TGFB1-202ENST00000597453 A8MZ25 164 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 CSN3P07498 182 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 OR9G9P0C7N8 305 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 ZNF735P0CB33 412 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 MAS1LP35410 378 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 RND3P61587 244 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 ZNF79Q15937 498 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 SCGB2B2Q4G0G5 96 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 C10orf55Q5SWW7 151 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 OR4A47Q6IF82 309 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 FAAP20Q6NZ36 180 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 SSX9Q7RTT3 188 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 TBC1D26Q86UD7 250 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 SGPP2Q8IWX5 399 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 OR4C16Q8NGL9 310 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 TRIM63Q969Q1 353 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 USMG5Q96IX5 58 aa11.53□□□□□ -0.56
TGFB1-202ENST00000597453 THAP7Q9BT49 309 aaPredicted RBP11.53□□□□□ -0.56
TGFB1-202ENST00000597453 IZUMO1RA6ND01 250 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 DISC1C4P0D8 188 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 MPPED1O15442 326 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 FGF2P09038 288 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 ERVK-16P61578 105 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 RPL8P62917 257 aaKnown RBP11.52□□□□□ -0.57
TGFB1-202ENST00000597453 RHOGP84095 191 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 RPEL1Q2QD12 228 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 ZNF585BQ52M93 769 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 PYDC2Q56P42 97 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 ZFAND1Q8TCF1 268 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 MRGPRFQ96AM1 343 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 FAM210AQ96ND0 272 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 CITED4Q96RK1 184 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 SPIN2AQ99865 258 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 SPIN2BQ9BPZ2 258 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 SLC2A8Q9NY64 477 aa11.52□□□□□ -0.57
TGFB1-202ENST00000597453 MARCH11A6NNE9 402 aa11.51□□□□□ -0.57
TGFB1-202ENST00000597453 H0Y980 276 aa11.51□□□□□ -0.57
TGFB1-202ENST00000597453 BMPR1BO00238 502 aa11.51□□□□□ -0.57
TGFB1-202ENST00000597453 IL6RP08887 468 aaPredicted RBP11.51□□□□□ -0.57
TGFB1-202ENST00000597453 PI3P19957 117 aa11.51□□□□□ -0.57
TGFB1-202ENST00000597453 LPAR6P43657 344 aa11.51□□□□□ -0.57
TGFB1-202ENST00000597453 PIGPP57054 158 aa11.51□□□□□ -0.57
TGFB1-202ENST00000597453 EXOSC2Q13868 293 aaKnown RBP11.51□□□□□ -0.57
TGFB1-202ENST00000597453 SURF2Q15527 256 aaPredicted RBP11.51□□□□□ -0.57
TGFB1-202ENST00000597453 CADM3Q8N126 398 aa11.51□□□□□ -0.57
TGFB1-202ENST00000597453 Q8N402 240 aa11.51□□□□□ -0.57
TGFB1-202ENST00000597453 DMBX1Q8NFW5 382 aa11.51□□□□□ -0.57
TGFB1-202ENST00000597453 OR13C8Q8NGS7 320 aa11.51□□□□□ -0.57
TGFB1-202ENST00000597453 PRRT1Q99946 306 aa11.51□□□□□ -0.57
TGFB1-202ENST00000597453 HRASLSQ9HDD0 168 aa11.51□□□□□ -0.57
TGFB1-202ENST00000597453 TMEM140Q9NV12 185 aa11.51□□□□□ -0.57
TGFB1-202ENST00000597453 TRBV9A0A0B4J1U6 114 aa11.5□□□□□ -0.57
TGFB1-202ENST00000597453 LYL1P12980 280 aa11.5□□□□□ -0.57
TGFB1-202ENST00000597453 HLA-GP17693 338 aa11.5□□□□□ -0.57
TGFB1-202ENST00000597453 RPL27AP46776 148 aaKnown RBP11.5□□□□□ -0.57
TGFB1-202ENST00000597453 AP3S2P59780 193 aa11.5□□□□□ -0.57
TGFB1-202ENST00000597453 C19orf35Q6ZS72 473 aa11.5□□□□□ -0.57
TGFB1-202ENST00000597453 CCDC71LQ8N9Z2 235 aa11.5□□□□□ -0.57
TGFB1-202ENST00000597453 ZBTB8BQ8NAP8 495 aaPredicted RBP11.5□□□□□ -0.57
TGFB1-202ENST00000597453 MARCH1Q8TCQ1 289 aa11.5□□□□□ -0.57
TGFB1-202ENST00000597453 EDA2RQ9HAV5 297 aa11.5□□□□□ -0.57
TGFB1-202ENST00000597453 GAR1Q9NY12 217 aaKnown RBP11.5□□□□□ -0.57
TGFB1-202ENST00000597453 SIGLEC8Q9NYZ4 499 aa11.5□□□□□ -0.57
TGFB1-202ENST00000597453 EPPK1P58107 5090 aaKnown RBP11.49□□□□□ -0.57
TGFB1-202ENST00000597453 FAM223BA6NKX1 122 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 TEX22C9J3V5 150 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 BOLA2-SMG1P6H3BVE0 249 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 UPK2O00526 184 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 CTSDP07339 412 aaPredicted RBP11.49□□□□□ -0.57
TGFB1-202ENST00000597453 FAUP35544 74 aaKnown RBP11.49□□□□□ -0.57
TGFB1-202ENST00000597453 MECP2P51608 486 aaKnown RBP11.49□□□□□ -0.57
TGFB1-202ENST00000597453 ATP5G2Q06055 141 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 KLF9Q13886 244 aaPredicted RBP11.49□□□□□ -0.57
TGFB1-202ENST00000597453 TATDN3Q17R31 274 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 ADAMTSL5Q6ZMM2 481 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 FAM223AQ8IWN6 122 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 TTC9CQ8N5M4 171 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 OR51S1Q8NGJ8 323 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 DEDD2Q8WXF8 326 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 SRRQ9GZT4 340 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 COPZ2Q9P299 210 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 SCP2D1Q9UJQ7 156 aa11.49□□□□□ -0.57
TGFB1-202ENST00000597453 TRAV3A0A0B4J244 114 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 A0A1B0GW64 132 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 HMX3A6NHT5 357 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 E7EUB6 86 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 OR2J3O76001 311 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 KRASP01116 189 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 RPA2P15927 270 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 G6PCP35575 357 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 HAGHQ16775 308 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 ZFAND6Q6FIF0 208 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 LCN12Q6JVE5 192 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 GTSCR1Q86UQ5 136 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 SLC25A42Q86VD7 318 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 TOMM5Q8N4H5 51 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 NECAP1Q8NC96 275 aa11.48□□□□□ -0.57
TGFB1-202ENST00000597453 PEMTQ9UBM1 199 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms