RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 KRASP01116 189 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 CLEC3BP05452 202 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 SERPINE2P07093 398 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 RPA2P15927 270 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 ZNF182P17025 639 aaPredicted RBP13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 CBLN1P23435 193 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 GDPD1Q8N9F7 314 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 OR10W1Q8NGF6 305 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 MUC7Q8TAX7 377 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 VN1R17PQ8TDU5 208 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 CITED4Q96RK1 184 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 TSC22D3Q99576 134 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 SLC2A8Q9NY64 477 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 FKBP11Q9NYL4 201 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 S4R3C0 116 aa13.54□□□□□ -0.24
CHMP2A-203ENST00000597209 SNAPC5O75971 98 aa13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 OR13C7P0DN81 318 aa13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 G6PCP35575 357 aa13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 WT1-ASQ06250 92 aa13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 HAGHQ16775 308 aa13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 LINC00322Q6ZN03 302 aaPredicted RBP13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 SLC38A6Q8IZM9 456 aa13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 OR5B3Q8NH48 314 aa13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 LSM10Q969L4 123 aaKnown RBP13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 ATP6V0BQ99437 205 aa13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 SPATA25Q9BR10 227 aa13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 NAA50Q9GZZ1 169 aaKnown RBP13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 TUBA4BQ9H853 241 aa13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 PRNDQ9UKY0 176 aa13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 OR51B2Q9Y5P1 312 aa13.53□□□□□ -0.24
CHMP2A-203ENST00000597209 TMEM213A2RRL7 107 aa13.52□□□□□ -0.25
CHMP2A-203ENST00000597209 FAM25AB3EWG3 89 aa13.52□□□□□ -0.25
CHMP2A-203ENST00000597209 FAM25CB3EWG5 89 aa13.52□□□□□ -0.25
CHMP2A-203ENST00000597209 FAM25GB3EWG6 89 aa13.52□□□□□ -0.25
CHMP2A-203ENST00000597209 PHLDA2Q53GA4 152 aa13.52□□□□□ -0.25
CHMP2A-203ENST00000597209 TBC1D26Q86UD7 250 aa13.52□□□□□ -0.25
CHMP2A-203ENST00000597209 C15orf40Q8WUR7 153 aa13.52□□□□□ -0.25
CHMP2A-203ENST00000597209 MARC2Q969Z3 335 aa13.52□□□□□ -0.25
CHMP2A-203ENST00000597209 NEURL2Q9BR09 285 aa13.52□□□□□ -0.25
CHMP2A-203ENST00000597209 PALMDQ9NP74 551 aa13.52□□□□□ -0.25
CHMP2A-203ENST00000597209 F11RQ9Y624 299 aaKnown RBP13.52□□□□□ -0.25
CHMP2A-203ENST00000597209 NBEAL2Q6ZNJ1 2754 aa13.51□□□□□ -0.25
CHMP2A-203ENST00000597209 ZNF320A2RRD8 509 aa13.51□□□□□ -0.25
CHMP2A-203ENST00000597209 C8orf88P0DMB2 117 aa13.51□□□□□ -0.25
CHMP2A-203ENST00000597209 EDN2P20800 178 aa13.51□□□□□ -0.25
CHMP2A-203ENST00000597209 ELLP55199 621 aaPredicted RBP13.51□□□□□ -0.25
CHMP2A-203ENST00000597209 CD81P60033 236 aa13.51□□□□□ -0.25
CHMP2A-203ENST00000597209 PLET1Q6UQ28 207 aa13.51□□□□□ -0.25
CHMP2A-203ENST00000597209 OR1L6Q8NGR2 347 aa13.51□□□□□ -0.25
CHMP2A-203ENST00000597209 TMEM56Q96MV1 263 aa13.51□□□□□ -0.25
CHMP2A-203ENST00000597209 ZNF436Q9C0F3 470 aaPredicted RBP13.51□□□□□ -0.25
CHMP2A-203ENST00000597209 TMEM14BQ9NUH8 114 aa13.51□□□□□ -0.25
CHMP2A-203ENST00000597209 NSG2Q9Y328 171 aa13.51□□□□□ -0.25
CHMP2A-203ENST00000597209 C15orf61A6NNL5 157 aa13.5□□□□□ -0.25
CHMP2A-203ENST00000597209 GPR183P32249 361 aa13.5□□□□□ -0.25
CHMP2A-203ENST00000597209 RND3P61587 244 aa13.5□□□□□ -0.25
CHMP2A-203ENST00000597209 GPR107Q5VW38 600 aa13.5□□□□□ -0.25
CHMP2A-203ENST00000597209 ZNF57Q68EA5 555 aaPredicted RBP13.5□□□□□ -0.25
CHMP2A-203ENST00000597209 SLC25A24Q6NUK1 477 aa13.5□□□□□ -0.25
CHMP2A-203ENST00000597209 UXS1Q8NBZ7 420 aa13.5□□□□□ -0.25
CHMP2A-203ENST00000597209 ZNF486Q96H40 463 aaPredicted RBP13.5□□□□□ -0.25
CHMP2A-203ENST00000597209 SEC22AQ96IW7 307 aa13.5□□□□□ -0.25
CHMP2A-203ENST00000597209 MRPS26Q9BYN8 205 aaKnown RBP13.5□□□□□ -0.25
CHMP2A-203ENST00000597209 UFC1Q9Y3C8 167 aa13.5□□□□□ -0.25
CHMP2A-203ENST00000597209 TGOLN2O43493 480 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 CD7P09564 240 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 TBPP20226 339 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 ALDH3B2P48448 385 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 MFAP2P55001 183 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 CASC10Q5T4H9 136 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 UNQ9165/PRO28630Q6UXU0 137 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 LHFPL1Q86WI0 220 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 ARRDC1Q8N5I2 433 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 CACNG8Q8WXS5 425 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 WDR89Q96FK6 387 aaPredicted RBP13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 HINT2Q9BX68 163 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 EDA2RQ9HAV5 297 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 PLEKHA3Q9HB20 300 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 MRPL27Q9P0M9 148 aaKnown RBP13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 EXTL2Q9UBQ6 330 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 KLK11Q9UBX7 282 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 MTFP1Q9UDX5 166 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 MLXQ9UH92 298 aa13.49□□□□□ -0.25
CHMP2A-203ENST00000597209 TRAV25A0A0B4J276 109 aa13.48□□□□□ -0.25
CHMP2A-203ENST00000597209 M0QYG6 137 aa13.48□□□□□ -0.25
CHMP2A-203ENST00000597209 IGKV1-39P01597 117 aa13.48□□□□□ -0.25
CHMP2A-203ENST00000597209 IGKV1D-39P04432 117 aa13.48□□□□□ -0.25
CHMP2A-203ENST00000597209 IFNA6P05013 189 aa13.48□□□□□ -0.25
CHMP2A-203ENST00000597209 GUCA2BQ16661 112 aa13.48□□□□□ -0.25
CHMP2A-203ENST00000597209 TM4SF20Q53R12 229 aa13.48□□□□□ -0.25
CHMP2A-203ENST00000597209 RNASE10Q5GAN6 216 aaKnown RBP13.48□□□□□ -0.25
CHMP2A-203ENST00000597209 SPSB3Q6PJ21 355 aa13.48□□□□□ -0.25
CHMP2A-203ENST00000597209 OR52I2Q8NH67 350 aa13.48□□□□□ -0.25
CHMP2A-203ENST00000597209 BSCL2Q96G97 398 aaPredicted RBP13.48□□□□□ -0.25
CHMP2A-203ENST00000597209 CEPT1Q9Y6K0 416 aa13.48□□□□□ -0.25
CHMP2A-203ENST00000597209 DBX1A6NMT0 343 aa13.47□□□□□ -0.25
CHMP2A-203ENST00000597209 OR11H12B2RN74 326 aa13.47□□□□□ -0.25
CHMP2A-203ENST00000597209 CD3DP04234 171 aa13.47□□□□□ -0.25
CHMP2A-203ENST00000597209 SLC16A13Q7RTY0 426 aa13.47□□□□□ -0.25
CHMP2A-203ENST00000597209 H2BFWTQ7Z2G1 175 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms