RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 NSG2Q9Y328 171 aa11.94□□□□□ -0.5
LIM2-202ENST00000596399 UFC1Q9Y3C8 167 aa11.94□□□□□ -0.5
LIM2-202ENST00000596399 TRAV25A0A0B4J276 109 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 SERPINE2P07093 398 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 GNRHRP30968 328 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 TGFBR1P36897 503 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 CATR1Q13166 79 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 SLC25A24Q6NUK1 477 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 LYG2Q86SG7 212 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 GDPD1Q8N9F7 314 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 GIMAP1Q8WWP7 306 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 TMEM190Q8WZ59 177 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 AIFM2Q9BRQ8 373 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 HINT2Q9BX68 163 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 C5orf66Q9H5L9 145 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 ETV7Q9Y603 341 aa11.93□□□□□ -0.5
LIM2-202ENST00000596399 SPRY2O43597 315 aa11.92□□□□□ -0.5
LIM2-202ENST00000596399 RLN1P04808 185 aa11.92□□□□□ -0.5
LIM2-202ENST00000596399 TRAPPC2P0DI81 140 aa11.92□□□□□ -0.5
LIM2-202ENST00000596399 TRAPPC2BP0DI82 140 aa11.92□□□□□ -0.5
LIM2-202ENST00000596399 RFX2P48378 723 aa11.92□□□□□ -0.5
LIM2-202ENST00000596399 ELLP55199 621 aaPredicted RBP11.92□□□□□ -0.5
LIM2-202ENST00000596399 ODF3L2Q3SX64 289 aa11.92□□□□□ -0.5
LIM2-202ENST00000596399 OR5AP2Q8NGF4 316 aa11.92□□□□□ -0.5
LIM2-202ENST00000596399 FCGR1BQ92637 280 aa11.92□□□□□ -0.5
LIM2-202ENST00000596399 PLEKHA2Q9HB19 425 aa11.92□□□□□ -0.5
LIM2-202ENST00000596399 KMT2AQ03164 3969 aa11.92□□□□□ -0.5
LIM2-202ENST00000596399 F8W735 103 aaPredicted RBP11.91□□□□□ -0.5
LIM2-202ENST00000596399 RPL35AP18077 110 aaKnown RBP11.91□□□□□ -0.5
LIM2-202ENST00000596399 ADMP35318 185 aa11.91□□□□□ -0.5
LIM2-202ENST00000596399 SLC38A6Q8IZM9 456 aa11.91□□□□□ -0.5
LIM2-202ENST00000596399 UBAC2Q8NBM4 344 aa11.91□□□□□ -0.5
LIM2-202ENST00000596399 VN1R17PQ8TDU5 208 aa11.91□□□□□ -0.5
LIM2-202ENST00000596399 SCARB1Q8WTV0 552 aa11.91□□□□□ -0.5
LIM2-202ENST00000596399 FCAMRQ8WWV6 532 aa11.91□□□□□ -0.5
LIM2-202ENST00000596399 ZNF414Q96IQ9 312 aa11.91□□□□□ -0.5
LIM2-202ENST00000596399 SPAG8Q99932 426 aaPredicted RBP11.91□□□□□ -0.5
LIM2-202ENST00000596399 C20orf24Q9BUV8 137 aa11.91□□□□□ -0.5
LIM2-202ENST00000596399 DIABLOQ9NR28 239 aa11.91□□□□□ -0.5
LIM2-202ENST00000596399 NDUFA4L2Q9NRX3 87 aa11.91□□□□□ -0.5
LIM2-202ENST00000596399 EHFQ9NZC4 300 aa11.91□□□□□ -0.5
LIM2-202ENST00000596399 THYN1Q9P016 225 aa11.91□□□□□ -0.5
LIM2-202ENST00000596399 DBX1A6NMT0 343 aa11.9□□□□□ -0.5
LIM2-202ENST00000596399 MARCH11A6NNE9 402 aa11.9□□□□□ -0.5
LIM2-202ENST00000596399 TSPAN4O14817 238 aa11.9□□□□□ -0.5
LIM2-202ENST00000596399 PGLYRP1O75594 196 aaPredicted RBP11.9□□□□□ -0.5
LIM2-202ENST00000596399 KRASP01116 189 aa11.9□□□□□ -0.5
LIM2-202ENST00000596399 PMP2P02689 132 aa11.9□□□□□ -0.5
LIM2-202ENST00000596399 G6PCP35575 357 aa11.9□□□□□ -0.5
LIM2-202ENST00000596399 LPAR6P43657 344 aa11.9□□□□□ -0.5
LIM2-202ENST00000596399 TNFRSF9Q07011 255 aa11.9□□□□□ -0.5
LIM2-202ENST00000596399 ZNF124Q15973 351 aa11.9□□□□□ -0.5
LIM2-202ENST00000596399 WFDC3Q8IUB2 231 aa11.9□□□□□ -0.5
LIM2-202ENST00000596399 OR5B3Q8NH48 314 aa11.9□□□□□ -0.5
LIM2-202ENST00000596399 SRSF8Q9BRL6 282 aaKnown RBP11.9□□□□□ -0.5
LIM2-202ENST00000596399 ZNF2Q9BSG1 426 aaPredicted RBP11.9□□□□□ -0.5
LIM2-202ENST00000596399 DAZ1Q9NQZ3 744 aaKnown RBP11.9□□□□□ -0.5
LIM2-202ENST00000596399 OR51B2Q9Y5P1 312 aa11.9□□□□□ -0.5
LIM2-202ENST00000596399 IGHV3-49A0A0A0MS15 119 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 A0A0A6YYH2 397 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 A6NJ64 397 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 K7EIM0 57 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 CTSDP07339 412 aaPredicted RBP11.89□□□□□ -0.51
LIM2-202ENST00000596399 BMI1P35226 326 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 APOC4P55056 127 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 SCAND1P57086 179 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 HERV-K104P61576 105 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 NEDD8Q15843 81 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 CEMP1Q6PRD7 247 aaPredicted RBP11.89□□□□□ -0.51
LIM2-202ENST00000596399 Q6ZWC4 215 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 APRG1Q8IVJ8 170 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 OR1L8Q8NGR8 309 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 BSCL2Q96G97 398 aaPredicted RBP11.89□□□□□ -0.51
LIM2-202ENST00000596399 IFT46Q9NQC8 304 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 C21orf62Q9NYP8 219 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 COMMD9Q9P000 198 aa11.89□□□□□ -0.51
LIM2-202ENST00000596399 F11RQ9Y624 299 aaKnown RBP11.89□□□□□ -0.51
LIM2-202ENST00000596399 DNAH10Q8IVF4 4471 aa11.88□□□□□ -0.51
LIM2-202ENST00000596399 NDUFA4O00483 81 aa11.88□□□□□ -0.51
LIM2-202ENST00000596399 ATP6V1G2O95670 118 aa11.88□□□□□ -0.51
LIM2-202ENST00000596399 F2RP25116 425 aa11.88□□□□□ -0.51
LIM2-202ENST00000596399 FCGR2BP31994 310 aaPredicted RBP11.88□□□□□ -0.51
LIM2-202ENST00000596399 CBX5P45973 191 aa11.88□□□□□ -0.51
LIM2-202ENST00000596399 ERVK-16P61578 105 aa11.88□□□□□ -0.51
LIM2-202ENST00000596399 DHRS11Q6UWP2 260 aa11.88□□□□□ -0.51
LIM2-202ENST00000596399 CD300LFQ8TDQ1 290 aa11.88□□□□□ -0.51
LIM2-202ENST00000596399 MOB3AQ96BX8 217 aa11.88□□□□□ -0.51
LIM2-202ENST00000596399 RNF183Q96D59 192 aa11.88□□□□□ -0.51
LIM2-202ENST00000596399 RNF2Q99496 336 aa11.88□□□□□ -0.51
LIM2-202ENST00000596399 FXYD6Q9H0Q3 95 aa11.88□□□□□ -0.51
LIM2-202ENST00000596399 TP53TG1Q9Y2A0 90 aa11.88□□□□□ -0.51
LIM2-202ENST00000596399 NUPR2A6NF83 97 aa11.87□□□□□ -0.51
LIM2-202ENST00000596399 XRCC3O43542 346 aa11.87□□□□□ -0.51
LIM2-202ENST00000596399 IGHV3-48P01763 117 aa11.87□□□□□ -0.51
LIM2-202ENST00000596399 CTSGP08311 255 aa11.87□□□□□ -0.51
LIM2-202ENST00000596399 FGF2P09038 288 aa11.87□□□□□ -0.51
LIM2-202ENST00000596399 TFPI2P48307 235 aa11.87□□□□□ -0.51
LIM2-202ENST00000596399 Q56UQ5 140 aa11.87□□□□□ -0.51
LIM2-202ENST00000596399 LAMTOR1Q6IAA8 161 aa11.87□□□□□ -0.51
LIM2-202ENST00000596399 RPP25LQ8N5L8 163 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms