RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 KRASP01116 189 aa12.77□□□□□ -0.37
CCDC9-202ENST00000595659 TRAPPC2P0DI81 140 aa12.77□□□□□ -0.37
CCDC9-202ENST00000595659 TRAPPC2BP0DI82 140 aa12.77□□□□□ -0.37
CCDC9-202ENST00000595659 ERVK-16P61578 105 aa12.77□□□□□ -0.37
CCDC9-202ENST00000595659 DHRS11Q6UWP2 260 aa12.77□□□□□ -0.37
CCDC9-202ENST00000595659 SLC16A13Q7RTY0 426 aa12.77□□□□□ -0.37
CCDC9-202ENST00000595659 OR5H2Q8NGV7 314 aa12.77□□□□□ -0.37
CCDC9-202ENST00000595659 CD300LFQ8TDQ1 290 aa12.77□□□□□ -0.37
CCDC9-202ENST00000595659 FCAMRQ8WWV6 532 aa12.77□□□□□ -0.37
CCDC9-202ENST00000595659 MOB3AQ96BX8 217 aa12.77□□□□□ -0.37
CCDC9-202ENST00000595659 YIPF6Q96EC8 236 aa12.77□□□□□ -0.37
CCDC9-202ENST00000595659 A8MWP6 167 aa12.76□□□□□ -0.37
CCDC9-202ENST00000595659 F2RP25116 425 aa12.76□□□□□ -0.37
CCDC9-202ENST00000595659 HLA-DMAP28067 261 aa12.76□□□□□ -0.37
CCDC9-202ENST00000595659 G6PCP35575 357 aa12.76□□□□□ -0.37
CCDC9-202ENST00000595659 WT1-ASQ06250 92 aa12.76□□□□□ -0.37
CCDC9-202ENST00000595659 CROCCP3Q8IVE0 287 aa12.76□□□□□ -0.37
CCDC9-202ENST00000595659 FXYD6Q9H0Q3 95 aa12.76□□□□□ -0.37
CCDC9-202ENST00000595659 COMMD9Q9P000 198 aa12.76□□□□□ -0.37
CCDC9-202ENST00000595659 ANAPC10Q9UM13 185 aa12.76□□□□□ -0.37
CCDC9-202ENST00000595659 OR2T8A6NH00 312 aa12.75□□□□□ -0.37
CCDC9-202ENST00000595659 MARCH11A6NNE9 402 aa12.75□□□□□ -0.37
CCDC9-202ENST00000595659 TMEM127O75204 238 aa12.75□□□□□ -0.37
CCDC9-202ENST00000595659 PTBP1P26599 531 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC9-202ENST00000595659 PRSS3P35030 304 aa12.75□□□□□ -0.37
CCDC9-202ENST00000595659 MFAP2P55001 183 aa12.75□□□□□ -0.37
CCDC9-202ENST00000595659 PHLDA2Q53GA4 152 aa12.75□□□□□ -0.37
CCDC9-202ENST00000595659 LYSMD2Q8IV50 215 aa12.75□□□□□ -0.37
CCDC9-202ENST00000595659 GDPD1Q8N9F7 314 aa12.75□□□□□ -0.37
CCDC9-202ENST00000595659 OR1L8Q8NGR8 309 aa12.75□□□□□ -0.37
CCDC9-202ENST00000595659 DGCR14Q96DF8 476 aaKnown RBP12.75□□□□□ -0.37
CCDC9-202ENST00000595659 THYN1Q9P016 225 aa12.75□□□□□ -0.37
CCDC9-202ENST00000595659 OR51B2Q9Y5P1 312 aa12.75□□□□□ -0.37
CCDC9-202ENST00000595659 DNAH1Q9P2D7 4330 aa12.75□□□□□ -0.37
CCDC9-202ENST00000595659 IGHV3OR16-8A0A075B7F1 116 aa12.74□□□□□ -0.37
CCDC9-202ENST00000595659 TGOLN2O43493 480 aa12.74□□□□□ -0.37
CCDC9-202ENST00000595659 EIF4EP06730 217 aaKnown RBP12.74□□□□□ -0.37
CCDC9-202ENST00000595659 SERPINE2P07093 398 aa12.74□□□□□ -0.37
CCDC9-202ENST00000595659 HRH1P35367 487 aa12.74□□□□□ -0.37
CCDC9-202ENST00000595659 TAS2R46P59540 309 aa12.74□□□□□ -0.37
CCDC9-202ENST00000595659 RBPMS2Q6ZRY4 209 aaKnown RBP12.74□□□□□ -0.37
CCDC9-202ENST00000595659 TSPAN14Q8NG11 270 aa12.74□□□□□ -0.37
CCDC9-202ENST00000595659 OR6F1Q8NGZ6 308 aa12.74□□□□□ -0.37
CCDC9-202ENST00000595659 BORCS5Q969J3 196 aa12.74□□□□□ -0.37
CCDC9-202ENST00000595659 SRSF8Q9BRL6 282 aaKnown RBP12.74□□□□□ -0.37
CCDC9-202ENST00000595659 NDUFA4L2Q9NRX3 87 aa12.74□□□□□ -0.37
CCDC9-202ENST00000595659 COMMD3Q9UBI1 195 aa12.74□□□□□ -0.37
CCDC9-202ENST00000595659 UFC1Q9Y3C8 167 aa12.74□□□□□ -0.37
CCDC9-202ENST00000595659 CSMD3Q7Z407 3707 aa12.74□□□□□ -0.37
CCDC9-202ENST00000595659 DBX1A6NMT0 343 aa12.73□□□□□ -0.37
CCDC9-202ENST00000595659 C8orf88P0DMB2 117 aa12.73□□□□□ -0.37
CCDC9-202ENST00000595659 NAT1P18440 290 aa12.73□□□□□ -0.37
CCDC9-202ENST00000595659 CMTM1Q8IZ96 169 aa12.73□□□□□ -0.37
CCDC9-202ENST00000595659 VN1R17PQ8TDU5 208 aa12.73□□□□□ -0.37
CCDC9-202ENST00000595659 MRPL27Q9P0M9 148 aaKnown RBP12.73□□□□□ -0.37
CCDC9-202ENST00000595659 UBQLN2Q9UHD9 624 aa12.73□□□□□ -0.37
CCDC9-202ENST00000595659 A0A087WXM4 84 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 GPR31O00270 319 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 CYB5BO43169 146 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 ZNF207O43670 478 aaKnown RBP12.72□□□□□ -0.37
CCDC9-202ENST00000595659 SNAPC5O75971 98 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 TSPAN5P62079 268 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 NCS1P62166 190 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 SNX29P2Q8IUI4 249 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 UBAC2Q8NBM4 344 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 OR1L6Q8NGR2 347 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 MARC2Q969Z3 335 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 SLC25A46Q96AG3 418 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 CHRDL1Q9BU40 450 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 C20orf24Q9BUV8 137 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 GGTLC1Q9BX51 225 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 ZNF436Q9C0F3 470 aaPredicted RBP12.72□□□□□ -0.37
CCDC9-202ENST00000595659 VCX3AQ9NNX9 186 aa12.72□□□□□ -0.37
CCDC9-202ENST00000595659 LOC102724200A0A096LPH7 203 aaPredicted RBP12.71□□□□□ -0.37
CCDC9-202ENST00000595659 ANKRD55Q3KP44 614 aa12.71□□□□□ -0.37
CCDC9-202ENST00000595659 THOC7Q6I9Y2 204 aaKnown RBP12.71□□□□□ -0.37
CCDC9-202ENST00000595659 GPX8Q8TED1 209 aa12.71□□□□□ -0.37
CCDC9-202ENST00000595659 SCARB1Q8WTV0 552 aa12.71□□□□□ -0.37
CCDC9-202ENST00000595659 TMEM190Q8WZ59 177 aa12.71□□□□□ -0.37
CCDC9-202ENST00000595659 LSM10Q969L4 123 aaKnown RBP12.71□□□□□ -0.37
CCDC9-202ENST00000595659 C21orf62Q9NYP8 219 aa12.71□□□□□ -0.37
CCDC9-202ENST00000595659 F11RQ9Y624 299 aaKnown RBP12.71□□□□□ -0.37
CCDC9-202ENST00000595659 LYSTQ99698 3801 aa12.71□□□□□ -0.38
CCDC9-202ENST00000595659 EPPK1P58107 5090 aaKnown RBP12.7□□□□□ -0.38
CCDC9-202ENST00000595659 HYDINQ4G0P3 5121 aa12.7□□□□□ -0.38
CCDC9-202ENST00000595659 TRAV25A0A0B4J276 109 aa12.7□□□□□ -0.38
CCDC9-202ENST00000595659 FGF2P09038 288 aa12.7□□□□□ -0.38
CCDC9-202ENST00000595659 ELLP55199 621 aaPredicted RBP12.7□□□□□ -0.38
CCDC9-202ENST00000595659 VBP1P61758 197 aa12.7□□□□□ -0.38
CCDC9-202ENST00000595659 Q56UQ5 140 aa12.7□□□□□ -0.38
CCDC9-202ENST00000595659 HSD17B13Q7Z5P4 300 aaPredicted RBP12.7□□□□□ -0.38
CCDC9-202ENST00000595659 BSCL2Q96G97 398 aaPredicted RBP12.7□□□□□ -0.38
CCDC9-202ENST00000595659 OVOL2Q9BRP0 275 aa12.7□□□□□ -0.38
CCDC9-202ENST00000595659 SMIM31A0A1B0GVY4 71 aa12.69□□□□□ -0.38
CCDC9-202ENST00000595659 F8W735 103 aaPredicted RBP12.69□□□□□ -0.38
CCDC9-202ENST00000595659 K7EIM0 57 aa12.69□□□□□ -0.38
CCDC9-202ENST00000595659 HPGDSO60760 199 aa12.69□□□□□ -0.38
CCDC9-202ENST00000595659 ADMP35318 185 aa12.69□□□□□ -0.38
CCDC9-202ENST00000595659 RNASE12Q5GAN4 147 aaKnown RBP12.69□□□□□ -0.38
CCDC9-202ENST00000595659 TBC1D26Q86UD7 250 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms