RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 PGAM2P15259 253 aa13.54□□□□□ -0.24
SHKBP1-204ENST00000594862 G6PCP35575 357 aa13.54□□□□□ -0.24
SHKBP1-204ENST00000594862 MEF2DQ14814 521 aa13.54□□□□□ -0.24
SHKBP1-204ENST00000594862 ZNF585BQ52M93 769 aa13.54□□□□□ -0.24
SHKBP1-204ENST00000594862 LHFPL1Q86WI0 220 aa13.54□□□□□ -0.24
SHKBP1-204ENST00000594862 GDPD1Q8N9F7 314 aa13.54□□□□□ -0.24
SHKBP1-204ENST00000594862 CCDC71LQ8N9Z2 235 aa13.54□□□□□ -0.24
SHKBP1-204ENST00000594862 OR1L6Q8NGR2 347 aa13.54□□□□□ -0.24
SHKBP1-204ENST00000594862 ZFAND1Q8TCF1 268 aa13.54□□□□□ -0.24
SHKBP1-204ENST00000594862 DYNC2LI1Q8TCX1 351 aa13.54□□□□□ -0.24
SHKBP1-204ENST00000594862 MIXL1Q9H2W2 232 aa13.54□□□□□ -0.24
SHKBP1-204ENST00000594862 LGALS9O00182 355 aa13.53□□□□□ -0.24
SHKBP1-204ENST00000594862 CTDSPLO15194 276 aa13.53□□□□□ -0.24
SHKBP1-204ENST00000594862 B3GALNT1O75752 331 aa13.53□□□□□ -0.24
SHKBP1-204ENST00000594862 RAB3DO95716 219 aa13.53□□□□□ -0.24
SHKBP1-204ENST00000594862 REG1AP05451 166 aa13.53□□□□□ -0.24
SHKBP1-204ENST00000594862 MYOD1P15172 320 aa13.53□□□□□ -0.24
SHKBP1-204ENST00000594862 ARL3P36405 182 aa13.53□□□□□ -0.24
SHKBP1-204ENST00000594862 SMIM4Q8WVI0 70 aa13.53□□□□□ -0.24
SHKBP1-204ENST00000594862 ATP6V0BQ99437 205 aa13.53□□□□□ -0.24
SHKBP1-204ENST00000594862 NDUFA4L2Q9NRX3 87 aa13.53□□□□□ -0.24
SHKBP1-204ENST00000594862 OR51B2Q9Y5P1 312 aa13.53□□□□□ -0.24
SHKBP1-204ENST00000594862 TEX50A0A1B0GTY4 177 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 C15orf61A6NNL5 157 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 CTDSP2O14595 271 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 NDUFB8O95169 186 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 CSN3P07498 182 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 OR13C7P0DN81 318 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 STEAP1BQ6NZ63 245 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 IL34Q6ZMJ4 242 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 H2BFWTQ7Z2G1 175 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 GPHB5Q86YW7 130 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 SGPP2Q8IWX5 399 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 TERB2Q8NHR7 220 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 VN1R17PQ8TDU5 208 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 DIRAS2Q96HU8 199 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 CCDC140Q96MF4 163 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 TMEM14BQ9NUH8 114 aa13.52□□□□□ -0.25
SHKBP1-204ENST00000594862 PIGPP57054 158 aa13.51□□□□□ -0.25
SHKBP1-204ENST00000594862 IL18Q14116 193 aa13.51□□□□□ -0.25
SHKBP1-204ENST00000594862 FAM106AQ4KMX7 169 aa13.51□□□□□ -0.25
SHKBP1-204ENST00000594862 CLEC19AQ6UXS0 136 aa13.51□□□□□ -0.25
SHKBP1-204ENST00000594862 C19orf35Q6ZS72 473 aa13.51□□□□□ -0.25
SHKBP1-204ENST00000594862 GTSCR1Q86UQ5 136 aa13.51□□□□□ -0.25
SHKBP1-204ENST00000594862 OR4A16Q8NH70 328 aa13.51□□□□□ -0.25
SHKBP1-204ENST00000594862 ISOC1Q96CN7 298 aa13.51□□□□□ -0.25
SHKBP1-204ENST00000594862 SEC22AQ96IW7 307 aa13.51□□□□□ -0.25
SHKBP1-204ENST00000594862 HINT2Q9BX68 163 aa13.51□□□□□ -0.25
SHKBP1-204ENST00000594862 C6orf62Q9GZU0 229 aaPredicted RBP13.51□□□□□ -0.25
SHKBP1-204ENST00000594862 COPZ2Q9P299 210 aa13.51□□□□□ -0.25
SHKBP1-204ENST00000594862 RSL24D1Q9UHA3 163 aaKnown RBP13.51□□□□□ -0.25
SHKBP1-204ENST00000594862 DISC1C4P0D8 188 aa13.5□□□□□ -0.25
SHKBP1-204ENST00000594862 PPP5D1E7EU14 171 aa13.5□□□□□ -0.25
SHKBP1-204ENST00000594862 H3BMQ9 156 aa13.5□□□□□ -0.25
SHKBP1-204ENST00000594862 MECP2P51608 486 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-204ENST00000594862 PPP5CP53041 499 aa13.5□□□□□ -0.25
SHKBP1-204ENST00000594862 WT1-ASQ06250 92 aa13.5□□□□□ -0.25
SHKBP1-204ENST00000594862 SURF2Q15527 256 aaPredicted RBP13.5□□□□□ -0.25
SHKBP1-204ENST00000594862 C11orf87Q6NUJ2 197 aa13.5□□□□□ -0.25
SHKBP1-204ENST00000594862 OR10W1Q8NGF6 305 aa13.5□□□□□ -0.25
SHKBP1-204ENST00000594862 DYNLRB2Q8TF09 96 aa13.5□□□□□ -0.25
SHKBP1-204ENST00000594862 TECRQ9NZ01 308 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-204ENST00000594862 DMRT1Q9Y5R6 373 aa13.5□□□□□ -0.25
SHKBP1-204ENST00000594862 F11RQ9Y624 299 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-204ENST00000594862 A8MWP6 167 aa13.49□□□□□ -0.25
SHKBP1-204ENST00000594862 A8MZ25 164 aa13.49□□□□□ -0.25
SHKBP1-204ENST00000594862 SCGB2B2Q4G0G5 96 aa13.49□□□□□ -0.25
SHKBP1-204ENST00000594862 HAPLN4Q86UW8 402 aa13.49□□□□□ -0.25
SHKBP1-204ENST00000594862 ZNF502Q8TBZ5 544 aa13.49□□□□□ -0.25
SHKBP1-204ENST00000594862 PRRT1Q99946 306 aa13.49□□□□□ -0.25
SHKBP1-204ENST00000594862 PALMDQ9NP74 551 aa13.49□□□□□ -0.25
SHKBP1-204ENST00000594862 C14orf166Q9Y224 244 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-204ENST00000594862 U3KQK5 164 aa13.49□□□□□ -0.25
SHKBP1-204ENST00000594862 C3orf85A0A1B0GTC6 90 aa13.48□□□□□ -0.25
SHKBP1-204ENST00000594862 MFSD2BA6NFX1 497 aa13.48□□□□□ -0.25
SHKBP1-204ENST00000594862 OR2C1O95371 312 aa13.48□□□□□ -0.25
SHKBP1-204ENST00000594862 CTSDP07339 412 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-204ENST00000594862 AKAIN1P0CW23 69 aa13.48□□□□□ -0.25
SHKBP1-204ENST00000594862 AKR1C2P52895 323 aa13.48□□□□□ -0.25
SHKBP1-204ENST00000594862 SLC25A24Q6NUK1 477 aa13.48□□□□□ -0.25
SHKBP1-204ENST00000594862 MRGPRFQ96AM1 343 aa13.48□□□□□ -0.25
SHKBP1-204ENST00000594862 WWC2-AS2Q96NR7 200 aa13.48□□□□□ -0.25
SHKBP1-204ENST00000594862 SLIRPQ9GZT3 109 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-204ENST00000594862 GAR1Q9NY12 217 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-204ENST00000594862 NSG2Q9Y328 171 aa13.48□□□□□ -0.25
SHKBP1-204ENST00000594862 C2orf70A6NJV1 201 aa13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 GSTZ1O43708 216 aaPredicted RBP13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 IGHV3-23P01764 117 aa13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 CLEC3BP05452 202 aa13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 FRMD6-AS1P0C7T7 363 aa13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 GPR183P32249 361 aa13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 PRCDQ00LT1 54 aa13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 SPSB3Q6PJ21 355 aa13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 PLET1Q6UQ28 207 aa13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 OR4D10Q8NGI6 311 aa13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 OR13C8Q8NGS7 320 aa13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 OR1P1Q8NH06 330 aa13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 MCFD2Q8NI22 146 aa13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 MARC2Q969Z3 335 aa13.47□□□□□ -0.25
SHKBP1-204ENST00000594862 TENM3Q9P273 2699 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms