RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 SERPINE2P07093 398 aa17.72■□□□□ 0.43
LSM4-204ENST00000594828 OR13C7P0DN81 318 aa17.72■□□□□ 0.43
LSM4-204ENST00000594828 S100GP29377 79 aa17.72■□□□□ 0.43
LSM4-204ENST00000594828 RCVRNP35243 200 aa17.72■□□□□ 0.43
LSM4-204ENST00000594828 G6PCP35575 357 aa17.72■□□□□ 0.43
LSM4-204ENST00000594828 GUCA2BQ16661 112 aa17.72■□□□□ 0.43
LSM4-204ENST00000594828 PHLDA2Q53GA4 152 aa17.72■□□□□ 0.43
LSM4-204ENST00000594828 CITED4Q96RK1 184 aa17.72■□□□□ 0.43
LSM4-204ENST00000594828 SPATA25Q9BR10 227 aa17.72■□□□□ 0.43
LSM4-204ENST00000594828 ZC4H2Q9NQZ6 224 aa17.72■□□□□ 0.43
LSM4-204ENST00000594828 NSG2Q9Y328 171 aa17.72■□□□□ 0.43
LSM4-204ENST00000594828 TPPPO94811 219 aa17.71■□□□□ 0.43
LSM4-204ENST00000594828 PTBP1P26599 531 aaKnown RBP eCLIP17.71■□□□□ 0.43
LSM4-204ENST00000594828 WT1-ASQ06250 92 aa17.71■□□□□ 0.43
LSM4-204ENST00000594828 CASC10Q5T4H9 136 aa17.71■□□□□ 0.43
LSM4-204ENST00000594828 SLC25A24Q6NUK1 477 aa17.71■□□□□ 0.43
LSM4-204ENST00000594828 MZT2AQ6P582 158 aa17.71■□□□□ 0.43
LSM4-204ENST00000594828 GDPD1Q8N9F7 314 aa17.71■□□□□ 0.43
LSM4-204ENST00000594828 ZNF502Q8TBZ5 544 aa17.71■□□□□ 0.43
LSM4-204ENST00000594828 CACNG8Q8WXS5 425 aa17.71■□□□□ 0.43
LSM4-204ENST00000594828 HINT2Q9BX68 163 aa17.71■□□□□ 0.43
LSM4-204ENST00000594828 PLEKHA3Q9HB20 300 aa17.71■□□□□ 0.43
LSM4-204ENST00000594828 NDUFA4L2Q9NRX3 87 aa17.71■□□□□ 0.43
LSM4-204ENST00000594828 OR51B2Q9Y5P1 312 aa17.71■□□□□ 0.43
LSM4-204ENST00000594828 TMEM213A2RRL7 107 aa17.7■□□□□ 0.42
LSM4-204ENST00000594828 A8MWP6 167 aa17.7■□□□□ 0.42
LSM4-204ENST00000594828 FAM25AB3EWG3 89 aa17.7■□□□□ 0.42
LSM4-204ENST00000594828 FAM25CB3EWG5 89 aa17.7■□□□□ 0.42
LSM4-204ENST00000594828 FAM25GB3EWG6 89 aa17.7■□□□□ 0.42
LSM4-204ENST00000594828 CD7P09564 240 aa17.7■□□□□ 0.42
LSM4-204ENST00000594828 GPR183P32249 361 aa17.7■□□□□ 0.42
LSM4-204ENST00000594828 PLET1Q6UQ28 207 aa17.7■□□□□ 0.42
LSM4-204ENST00000594828 UXS1Q8NBZ7 420 aa17.7■□□□□ 0.42
LSM4-204ENST00000594828 VN1R17PQ8TDU5 208 aa17.7■□□□□ 0.42
LSM4-204ENST00000594828 WDR89Q96FK6 387 aaPredicted RBP17.7■□□□□ 0.42
LSM4-204ENST00000594828 NAA50Q9GZZ1 169 aaKnown RBP17.7■□□□□ 0.42
LSM4-204ENST00000594828 STAB2Q8WWQ8 2551 aa17.7■□□□□ 0.42
LSM4-204ENST00000594828 TBC1D26Q86UD7 250 aa17.69■□□□□ 0.42
LSM4-204ENST00000594828 AP3S1Q92572 193 aa17.69■□□□□ 0.42
LSM4-204ENST00000594828 LSM10Q969L4 123 aaKnown RBP17.69■□□□□ 0.42
LSM4-204ENST00000594828 FAM212BQ9NTI7 297 aaPredicted RBP17.69■□□□□ 0.42
LSM4-204ENST00000594828 FKBP11Q9NYL4 201 aa17.69■□□□□ 0.42
LSM4-204ENST00000594828 PRNDQ9UKY0 176 aa17.69■□□□□ 0.42
LSM4-204ENST00000594828 SELENOKQ9Y6D0 94 aa17.69■□□□□ 0.42
LSM4-204ENST00000594828 LYL1P12980 280 aa17.68■□□□□ 0.42
LSM4-204ENST00000594828 UCP3P55916 312 aa17.68■□□□□ 0.42
LSM4-204ENST00000594828 CTF1Q16619 201 aa17.68■□□□□ 0.42
LSM4-204ENST00000594828 TM4SF20Q53R12 229 aa17.68■□□□□ 0.42
LSM4-204ENST00000594828 ZNF57Q68EA5 555 aaPredicted RBP17.68■□□□□ 0.42
LSM4-204ENST00000594828 UNQ9165/PRO28630Q6UXU0 137 aa17.68■□□□□ 0.42
LSM4-204ENST00000594828 SLC38A6Q8IZM9 456 aa17.68■□□□□ 0.42
LSM4-204ENST00000594828 TSC22D3Q99576 134 aa17.68■□□□□ 0.42
LSM4-204ENST00000594828 PALMDQ9NP74 551 aa17.68■□□□□ 0.42
LSM4-204ENST00000594828 MLXQ9UH92 298 aa17.68■□□□□ 0.42
LSM4-204ENST00000594828 GABARAPO95166 117 aa17.67■□□□□ 0.42
LSM4-204ENST00000594828 IFNA6P05013 189 aa17.67■□□□□ 0.42
LSM4-204ENST00000594828 SMIM18P0DKX4 95 aa17.67■□□□□ 0.42
LSM4-204ENST00000594828 ZNF182P17025 639 aaPredicted RBP17.67■□□□□ 0.42
LSM4-204ENST00000594828 LINC00322Q6ZN03 302 aaPredicted RBP17.67■□□□□ 0.42
LSM4-204ENST00000594828 DEFB125Q8N687 156 aa17.67■□□□□ 0.42
LSM4-204ENST00000594828 OR5B3Q8NH48 314 aa17.67■□□□□ 0.42
LSM4-204ENST00000594828 TMEM56Q96MV1 263 aa17.67■□□□□ 0.42
LSM4-204ENST00000594828 F11RQ9Y624 299 aaKnown RBP17.67■□□□□ 0.42
LSM4-204ENST00000594828 CEPT1Q9Y6K0 416 aa17.67■□□□□ 0.42
LSM4-204ENST00000594828 IGHV3-35A0A0C4DH35 117 aa17.66■□□□□ 0.42
LSM4-204ENST00000594828 OR11H12B2RN74 326 aa17.66■□□□□ 0.42
LSM4-204ENST00000594828 M0QYG6 137 aa17.66■□□□□ 0.42
LSM4-204ENST00000594828 GPR107Q5VW38 600 aa17.66■□□□□ 0.42
LSM4-204ENST00000594828 TMEM61Q8N0U2 210 aa17.66■□□□□ 0.42
LSM4-204ENST00000594828 MARC2Q969Z3 335 aa17.66■□□□□ 0.42
LSM4-204ENST00000594828 ISOC1Q96CN7 298 aa17.66■□□□□ 0.42
LSM4-204ENST00000594828 EDA2RQ9HAV5 297 aa17.66■□□□□ 0.42
LSM4-204ENST00000594828 KLK11Q9UBX7 282 aa17.66■□□□□ 0.42
LSM4-204ENST00000594828 TGOLN2O43493 480 aa17.65■□□□□ 0.42
LSM4-204ENST00000594828 MFAP2P55001 183 aa17.65■□□□□ 0.42
LSM4-204ENST00000594828 ELLP55199 621 aaPredicted RBP17.65■□□□□ 0.42
LSM4-204ENST00000594828 RNASE12Q5GAN4 147 aaKnown RBP17.65■□□□□ 0.42
LSM4-204ENST00000594828 SLC16A13Q7RTY0 426 aa17.65■□□□□ 0.42
LSM4-204ENST00000594828 TMEM14BQ9NUH8 114 aa17.65■□□□□ 0.42
LSM4-204ENST00000594828 MRPL27Q9P0M9 148 aaKnown RBP17.65■□□□□ 0.42
LSM4-204ENST00000594828 UFC1Q9Y3C8 167 aa17.65■□□□□ 0.42
LSM4-204ENST00000594828 OR2T8A6NH00 312 aa17.64■□□□□ 0.41
LSM4-204ENST00000594828 DBX1A6NMT0 343 aa17.64■□□□□ 0.41
LSM4-204ENST00000594828 C15orf61A6NNL5 157 aa17.64■□□□□ 0.41
LSM4-204ENST00000594828 C8orf88P0DMB2 117 aa17.64■□□□□ 0.41
LSM4-204ENST00000594828 H2BFWTQ7Z2G1 175 aa17.64■□□□□ 0.41
LSM4-204ENST00000594828 OR1L6Q8NGR2 347 aa17.64■□□□□ 0.41
LSM4-204ENST00000594828 SEC22AQ96IW7 307 aa17.64■□□□□ 0.41
LSM4-204ENST00000594828 ZNF436Q9C0F3 470 aaPredicted RBP17.64■□□□□ 0.41
LSM4-204ENST00000594828 WFDC10AQ9H1F0 79 aa17.64■□□□□ 0.41
LSM4-204ENST00000594828 SRD5A3Q9H8P0 318 aa17.64■□□□□ 0.41
LSM4-204ENST00000594828 EXTL2Q9UBQ6 330 aa17.64■□□□□ 0.41
LSM4-204ENST00000594828 IGHV3-21A0A0B4J1V1 117 aa17.63■□□□□ 0.41
LSM4-204ENST00000594828 RBMY1BA6NDE4 496 aaKnown RBP17.63■□□□□ 0.41
LSM4-204ENST00000594828 RBMY1EA6NEQ0 496 aaKnown RBP17.63■□□□□ 0.41
LSM4-204ENST00000594828 SCAF4O95104 1147 aaKnown RBP17.63■□□□□ 0.41
LSM4-204ENST00000594828 RBMY1DP0C7P1 496 aaKnown RBP17.63■□□□□ 0.41
LSM4-204ENST00000594828 RNASE10Q5GAN6 216 aaKnown RBP17.63■□□□□ 0.41
LSM4-204ENST00000594828 BTNL8Q6UX41 500 aa17.63■□□□□ 0.41
LSM4-204ENST00000594828 OR52I2Q8NH67 350 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms