RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 DMRT1Q9Y5R6 373 aa11.61□□□□□ -0.55
TRIM28-203ENST00000593582 S4R3C0 116 aa11.61□□□□□ -0.55
TRIM28-203ENST00000593582 MFSD2BA6NFX1 497 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 CD3DP04234 171 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 SERPINE2P07093 398 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 OR13C7P0DN81 318 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 FAM106AQ4KMX7 169 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 GTSCR1Q86UQ5 136 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 GPHB5Q86YW7 130 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 SBSPONQ8IVN8 264 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 LAX1Q8IWV1 398 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 Q8N1Y9 231 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 ARRDC1Q8N5I2 433 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 GDPD1Q8N9F7 314 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 OR2K2Q8NGT1 345 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 NDUFA4L2Q9NRX3 87 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 NSG2Q9Y328 171 aa11.6□□□□□ -0.55
TRIM28-203ENST00000593582 TENM3Q9P273 2699 aa11.59□□□□□ -0.55
TRIM28-203ENST00000593582 LGALS9O00182 355 aa11.59□□□□□ -0.55
TRIM28-203ENST00000593582 CLEC3BP05452 202 aa11.59□□□□□ -0.55
TRIM28-203ENST00000593582 IGHV4-30-4P0DP06 118 aa11.59□□□□□ -0.55
TRIM28-203ENST00000593582 PGAM2P15259 253 aa11.59□□□□□ -0.55
TRIM28-203ENST00000593582 TMBIM6P55061 237 aa11.59□□□□□ -0.55
TRIM28-203ENST00000593582 WT1-ASQ06250 92 aa11.59□□□□□ -0.55
TRIM28-203ENST00000593582 OR5B3Q8NH48 314 aa11.59□□□□□ -0.55
TRIM28-203ENST00000593582 DYNLRB2Q8TF09 96 aa11.59□□□□□ -0.55
TRIM28-203ENST00000593582 LSM10Q969L4 123 aaKnown RBP11.59□□□□□ -0.55
TRIM28-203ENST00000593582 ZNF486Q96H40 463 aaPredicted RBP11.59□□□□□ -0.55
TRIM28-203ENST00000593582 TMEM56Q96MV1 263 aa11.59□□□□□ -0.55
TRIM28-203ENST00000593582 BCL7BQ9BQE9 202 aa11.59□□□□□ -0.55
TRIM28-203ENST00000593582 MIXL1Q9H2W2 232 aa11.59□□□□□ -0.55
TRIM28-203ENST00000593582 ZNF320A2RRD8 509 aa11.58□□□□□ -0.56
TRIM28-203ENST00000593582 C2orf70A6NJV1 201 aa11.58□□□□□ -0.56
TRIM28-203ENST00000593582 GABARAPH6UMI1 98 aa11.58□□□□□ -0.56
TRIM28-203ENST00000593582 CTDSP2O14595 271 aa11.58□□□□□ -0.56
TRIM28-203ENST00000593582 NOL3O60936 208 aaKnown RBP11.58□□□□□ -0.56
TRIM28-203ENST00000593582 FOLR2P14207 255 aa11.58□□□□□ -0.56
TRIM28-203ENST00000593582 PTBP1P26599 531 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRIM28-203ENST00000593582 MECP2P51608 486 aaKnown RBP11.58□□□□□ -0.56
TRIM28-203ENST00000593582 TAS2R19P59542 299 aa11.58□□□□□ -0.56
TRIM28-203ENST00000593582 MRPS10P82664 201 aaKnown RBP11.58□□□□□ -0.56
TRIM28-203ENST00000593582 CD300EQ496F6 205 aaPredicted RBP11.58□□□□□ -0.56
TRIM28-203ENST00000593582 SLC25A24Q6NUK1 477 aa11.58□□□□□ -0.56
TRIM28-203ENST00000593582 H2BFWTQ7Z2G1 175 aa11.58□□□□□ -0.56
TRIM28-203ENST00000593582 LHFPL1Q86WI0 220 aa11.58□□□□□ -0.56
TRIM28-203ENST00000593582 TMEM229BQ8NBD8 167 aa11.58□□□□□ -0.56
TRIM28-203ENST00000593582 SEC22AQ96IW7 307 aa11.58□□□□□ -0.56
TRIM28-203ENST00000593582 TMEM14BQ9NUH8 114 aa11.58□□□□□ -0.56
TRIM28-203ENST00000593582 IZUMO1RA6ND01 250 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 C15orf61A6NNL5 157 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 A8MZ25 164 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 RAB3DO95716 219 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 GPR183P32249 361 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 RPL5P46777 297 aaKnown RBP11.57□□□□□ -0.56
TRIM28-203ENST00000593582 PIGPP57054 158 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 RND3P61587 244 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 SSBP1Q04837 148 aaKnown RBP11.57□□□□□ -0.56
TRIM28-203ENST00000593582 ADAMTSL5Q6ZMM2 481 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 OR1L6Q8NGR2 347 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 OR4A16Q8NH70 328 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 TERB2Q8NHR7 220 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 ZNF502Q8TBZ5 544 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 VN1R17PQ8TDU5 208 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 MRGPRFQ96AM1 343 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 ZMAT4Q9H898 229 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 ZC4H2Q9NQZ6 224 aa11.57□□□□□ -0.56
TRIM28-203ENST00000593582 TECRQ9NZ01 308 aaKnown RBP11.57□□□□□ -0.56
TRIM28-203ENST00000593582 CCDC59Q9P031 241 aaKnown RBP11.57□□□□□ -0.56
TRIM28-203ENST00000593582 F11RQ9Y624 299 aaKnown RBP11.57□□□□□ -0.56
TRIM28-203ENST00000593582 IGKV1-39P01597 117 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 CD74P04233 296 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 IGKV1D-39P04432 117 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 PI3P19957 117 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 CBLN1P23435 193 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 PPP5CP53041 499 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 DEFB114Q30KQ6 69 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 SCGB2B2Q4G0G5 96 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 STEAP1BQ6NZ63 245 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 PLET1Q6UQ28 207 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 OR4D10Q8NGI6 311 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 ZFAND1Q8TCF1 268 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 DYNC2LI1Q8TCX1 351 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 DIRAS2Q96HU8 199 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 THAP7Q9BT49 309 aaPredicted RBP11.56□□□□□ -0.56
TRIM28-203ENST00000593582 TUBA4BQ9H853 241 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 C19orf73Q9NVV2 129 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 RABL2AQ9UBK7 228 aaPredicted RBP11.56□□□□□ -0.56
TRIM28-203ENST00000593582 RABL2BQ9UNT1 228 aa11.56□□□□□ -0.56
TRIM28-203ENST00000593582 DBX1A6NMT0 343 aa11.55□□□□□ -0.56
TRIM28-203ENST00000593582 A8MWP6 167 aa11.55□□□□□ -0.56
TRIM28-203ENST00000593582 IL18Q14116 193 aa11.55□□□□□ -0.56
TRIM28-203ENST00000593582 MEF2DQ14814 521 aa11.55□□□□□ -0.56
TRIM28-203ENST00000593582 CCDC71LQ8N9Z2 235 aa11.55□□□□□ -0.56
TRIM28-203ENST00000593582 SMIM4Q8WVI0 70 aa11.55□□□□□ -0.56
TRIM28-203ENST00000593582 RCHY1Q96PM5 261 aa11.55□□□□□ -0.56
TRIM28-203ENST00000593582 C6orf62Q9GZU0 229 aaPredicted RBP11.55□□□□□ -0.56
TRIM28-203ENST00000593582 SLC2A8Q9NY64 477 aa11.55□□□□□ -0.56
TRIM28-203ENST00000593582 COPZ2Q9P299 210 aa11.55□□□□□ -0.56
TRIM28-203ENST00000593582 HUWE1Q7Z6Z7 4374 aaKnown RBP11.54□□□□□ -0.56
TRIM28-203ENST00000593582 C3orf85A0A1B0GTC6 90 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms