RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 TNXAQ16473 311 aa12.4□□□□□ -0.42
CIRBP-241ENST00000593048 TMED4Q7Z7H5 227 aa12.4□□□□□ -0.42
CIRBP-241ENST00000593048 SBSPONQ8IVN8 264 aa12.4□□□□□ -0.42
CIRBP-241ENST00000593048 H1FOOQ8IZA3 346 aaPredicted RBP12.4□□□□□ -0.42
CIRBP-241ENST00000593048 TEX45Q8NA69 505 aa12.4□□□□□ -0.42
CIRBP-241ENST00000593048 OR11H7Q8NGC8 314 aa12.4□□□□□ -0.42
CIRBP-241ENST00000593048 MARCH1Q8TCQ1 289 aa12.4□□□□□ -0.42
CIRBP-241ENST00000593048 MOB3AQ96BX8 217 aa12.4□□□□□ -0.42
CIRBP-241ENST00000593048 C5orf30Q96GV9 206 aa12.4□□□□□ -0.42
CIRBP-241ENST00000593048 ZNF2Q9BSG1 426 aaPredicted RBP12.4□□□□□ -0.42
CIRBP-241ENST00000593048 KCNIP3Q9Y2W7 256 aa12.4□□□□□ -0.42
CIRBP-241ENST00000593048 IGKV1D-8A0A087WSZ0 117 aa12.39□□□□□ -0.43
CIRBP-241ENST00000593048 C9orf170A2RU37 121 aa12.39□□□□□ -0.43
CIRBP-241ENST00000593048 MSGN1A6NI15 193 aa12.39□□□□□ -0.43
CIRBP-241ENST00000593048 HLA-AP01891 365 aaKnown RBP12.39□□□□□ -0.43
CIRBP-241ENST00000593048 FRMD6-AS1P0C7T7 363 aa12.39□□□□□ -0.43
CIRBP-241ENST00000593048 DUTP33316 252 aaKnown RBP12.39□□□□□ -0.43
CIRBP-241ENST00000593048 UBE2KP61086 200 aa12.39□□□□□ -0.43
CIRBP-241ENST00000593048 CYCSP99999 105 aaKnown RBP12.39□□□□□ -0.43
CIRBP-241ENST00000593048 FGL1Q08830 312 aa12.39□□□□□ -0.43
CIRBP-241ENST00000593048 HAPLN4Q86UW8 402 aa12.39□□□□□ -0.43
CIRBP-241ENST00000593048 CCDC71LQ8N9Z2 235 aa12.39□□□□□ -0.43
CIRBP-241ENST00000593048 COQ8AQ8NI60 647 aa12.39□□□□□ -0.43
CIRBP-241ENST00000593048 SEC22CQ9BRL7 303 aa12.39□□□□□ -0.43
CIRBP-241ENST00000593048 C5orf66Q9H5L9 145 aa12.39□□□□□ -0.43
CIRBP-241ENST00000593048 ZMAT4Q9H898 229 aa12.39□□□□□ -0.43
CIRBP-241ENST00000593048 LINC00473A8K010 186 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 TUSC2O75896 110 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 ACTL6BO94805 426 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 SFT2D2O95562 160 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 C4BPBP20851 252 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 S100GP29377 79 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 HERV-K104P61576 105 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 MSMO1Q15800 293 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 PRSS8Q16651 343 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 KCTD9Q7L273 389 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 SGPP2Q8IWX5 399 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 OSR1Q8TAX0 266 aaPredicted RBP12.38□□□□□ -0.43
CIRBP-241ENST00000593048 DDB2Q92466 427 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 GALNT14Q96FL9 552 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 USMG5Q96IX5 58 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 RCHY1Q96PM5 261 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 RTBDNQ9BSG5 229 aaPredicted RBP12.38□□□□□ -0.43
CIRBP-241ENST00000593048 MGAT4CQ9UBM8 478 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 PEF1Q9UBV8 284 aaKnown RBP12.38□□□□□ -0.43
CIRBP-241ENST00000593048 PRELID3BQ9Y3B1 194 aa12.38□□□□□ -0.43
CIRBP-241ENST00000593048 C3orf84H3BNL1 204 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 FCGR3BO75015 233 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 SLC22A5O76082 557 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 IGLV1-51P01701 117 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 PGAM2P15259 253 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 NFYAP23511 347 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-241ENST00000593048 FCGR2CP31995 323 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 SYNJ2BPP57105 145 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 RND3P61587 244 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 SRPXP78539 464 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 DEFA5Q01523 94 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 CD300CQ08708 224 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 KLF5Q13887 457 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-241ENST00000593048 ZNF645Q8N7E2 425 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 OR9G4Q8NGQ1 327 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 FYTTD1Q96QD9 318 aaKnown RBP12.37□□□□□ -0.43
CIRBP-241ENST00000593048 OR2W1Q9Y3N9 320 aa12.37□□□□□ -0.43
CIRBP-241ENST00000593048 STAB2Q8WWQ8 2551 aa12.36□□□□□ -0.43
CIRBP-241ENST00000593048 DBX1A6NMT0 343 aa12.36□□□□□ -0.43
CIRBP-241ENST00000593048 BRI3O95415 125 aa12.36□□□□□ -0.43
CIRBP-241ENST00000593048 PPYP01298 95 aa12.36□□□□□ -0.43
CIRBP-241ENST00000593048 OR9G9P0C7N8 305 aa12.36□□□□□ -0.43
CIRBP-241ENST00000593048 CXCL3P19876 107 aa12.36□□□□□ -0.43
CIRBP-241ENST00000593048 PPP1R1AQ13522 171 aa12.36□□□□□ -0.43
CIRBP-241ENST00000593048 RPEL1Q2QD12 228 aa12.36□□□□□ -0.43
CIRBP-241ENST00000593048 ZNF343Q6P1L6 599 aa12.36□□□□□ -0.43
CIRBP-241ENST00000593048 SRSF12Q8WXF0 261 aaKnown RBP12.36□□□□□ -0.43
CIRBP-241ENST00000593048 SORL1Q92673 2214 aa12.35□□□□□ -0.43
CIRBP-241ENST00000593048 CRYM-AS1A6NIL9 109 aa12.35□□□□□ -0.43
CIRBP-241ENST00000593048 H0Y980 276 aa12.35□□□□□ -0.43
CIRBP-241ENST00000593048 AKR1C4P17516 323 aa12.35□□□□□ -0.43
CIRBP-241ENST00000593048 OR2B11Q5JQS5 317 aa12.35□□□□□ -0.43
CIRBP-241ENST00000593048 MMD2Q8IY49 270 aa12.35□□□□□ -0.43
CIRBP-241ENST00000593048 LRTM2Q8N967 370 aa12.35□□□□□ -0.43
CIRBP-241ENST00000593048 ADAD2Q8NCV1 583 aaKnown RBP12.35□□□□□ -0.43
CIRBP-241ENST00000593048 SPIN2AQ99865 258 aa12.35□□□□□ -0.43
CIRBP-241ENST00000593048 SPIN2BQ9BPZ2 258 aa12.35□□□□□ -0.43
CIRBP-241ENST00000593048 ZNF430Q9H8G1 570 aaPredicted RBP12.35□□□□□ -0.43
CIRBP-241ENST00000593048 HMSDA8MTL9 139 aa12.34□□□□□ -0.43
CIRBP-241ENST00000593048 SAA1P0DJI8 122 aaPredicted RBP12.34□□□□□ -0.43
CIRBP-241ENST00000593048 IGHV4-30-4P0DP06 118 aa12.34□□□□□ -0.43
CIRBP-241ENST00000593048 VAMP1P23763 118 aa12.34□□□□□ -0.43
CIRBP-241ENST00000593048 ATP5G2Q06055 141 aa12.34□□□□□ -0.43
CIRBP-241ENST00000593048 MRGPRG-AS1Q2M3A8 158 aa12.34□□□□□ -0.43
CIRBP-241ENST00000593048 CMTM1Q8IZ96 169 aa12.34□□□□□ -0.43
CIRBP-241ENST00000593048 ZBTB34Q8NCN2 500 aa12.34□□□□□ -0.43
CIRBP-241ENST00000593048 TMEM230Q96A57 120 aa12.34□□□□□ -0.43
CIRBP-241ENST00000593048 DYNC2H1Q8NCM8 4307 aaKnown RBP12.33□□□□□ -0.43
CIRBP-241ENST00000593048 DUXBA0A1W2PPF3 345 aa12.33□□□□□ -0.44
CIRBP-241ENST00000593048 GPR31O00270 319 aa12.33□□□□□ -0.44
CIRBP-241ENST00000593048 TRBV12-3P01733 135 aa12.33□□□□□ -0.44
CIRBP-241ENST00000593048 PRH1P02810 166 aa12.33□□□□□ -0.44
CIRBP-241ENST00000593048 RHOGP84095 191 aa12.33□□□□□ -0.44
CIRBP-241ENST00000593048 OR52B4Q8NGK2 314 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms