RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.2	□□□□□ -0.78
NPC1-212	ENST00000591107	OR51H1	Q8NH63	302 aa		10.2	□□□□□ -0.78
NPC1-212	ENST00000591107	ZNF431	Q8TF32	576 aa	Predicted RBP	10.2	□□□□□ -0.78
NPC1-212	ENST00000591107	MS4A10	Q96PG2	267 aa		10.2	□□□□□ -0.78
NPC1-212	ENST00000591107	CLCC1	Q96S66	551 aa		10.2	□□□□□ -0.78
NPC1-212	ENST00000591107	GHITM	Q9H3K2	345 aa		10.2	□□□□□ -0.78
NPC1-212	ENST00000591107	PRR13	Q9NZ81	148 aa		10.2	□□□□□ -0.78
NPC1-212	ENST00000591107	ZNF580	Q9UK33	172 aa		10.2	□□□□□ -0.78
NPC1-212	ENST00000591107	SORL1	Q92673	2214 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	C3orf85	A0A1B0GTC6	90 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	SNRPGP15	A8MWD9	76 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	LINC01619	G3V211	115 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	CREBL2	O60519	120 aa	Predicted RBP	10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	PROP1	O75360	226 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	NDUFA3	O95167	84 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	H2AFB1	P0C5Y9	115 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	OR5AC1	P0C628	307 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	RUNX1	Q01196	453 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	CATR1	Q13166	79 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	SP6	Q3SY56	376 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	DRAXIN	Q8NBI3	349 aa	Predicted RBP	10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	TCTEX1D2	Q8WW35	142 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	TP53RK	Q96S44	253 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	HSD17B10	Q99714	261 aa	Known RBP	10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	KCNIP3	Q9Y2W7	256 aa		10.19	□□□□□ -0.78
NPC1-212	ENST00000591107	LINC00473	A8K010	186 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107		H0Y980	276 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	LGALS1	P09382	135 aa	Known RBP	10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	EGR2	P11161	476 aa	Predicted RBP	10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	ANXA3	P12429	323 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	F2R	P25116	425 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	DUT	P33316	252 aa	Known RBP	10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	LINC00205	P59089	165 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	RPL30	P62888	115 aa	Known RBP	10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	PLGLA	Q15195	96 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	OR2B11	Q5JQS5	317 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	LIN54	Q6MZP7	749 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	FAM71F2	Q6NXP2	309 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	ZNF66	Q6ZN08	573 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	KCTD9	Q7L273	389 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	ZNF429	Q86V71	674 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	GALNT14	Q96FL9	552 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	KIAA1456	Q9P272	454 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	PFDN2	Q9UHV9	154 aa		10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	FOXA2	Q9Y261	457 aa	Predicted RBP	10.18	□□□□□ -0.78
NPC1-212	ENST00000591107	SSNA1	O43805	119 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	CT45A6	P0DMU7	189 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	CT45A5	P0DMU8	189 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	CT45A7	P0DMV0	189 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	INSL3	P51460	131 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	TPPP2	P59282	170 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	CX3CL1	P78423	397 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	TMEM187	Q14656	261 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	ANKRD55	Q3KP44	614 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	UNQ5815/PRO19632	Q6UWF5	114 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	ADAMTSL5	Q6ZMM2	481 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	CADM3	Q8N126	398 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	UXS1	Q8NBZ7	420 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	NPB	Q8NG41	125 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	MITD1	Q8WV92	249 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	MED28	Q9H204	178 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107	ALMS1	Q8TCU4	4167 aa		10.17	□□□□□ -0.78
NPC1-212	ENST00000591107		H0YJW9	148 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	RRH	O14718	337 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	SHOX	O15266	292 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	CA2	P00918	260 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	UCP1	P25874	307 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	BCAP31	P51572	246 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	RRAS2	P62070	204 aa	Predicted RBP	10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	ACSM6	Q6P461	480 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	SPAG16	Q8N0X2	631 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	ZNF383	Q8NA42	475 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	COQ8A	Q8NI60	647 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	GLYATL2	Q8WU03	294 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	ADTRP	Q96IZ2	230 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	PHB2	Q99623	299 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107	TMEM222	Q9H0R3	208 aa		10.16	□□□□□ -0.78
NPC1-212	ENST00000591107		A0A0B4J2A0	478 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107		H7C2Y5	167 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	FCGR3B	O75015	233 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	B3GALNT1	O75752	331 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	LYL1	P12980	280 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	LPAR6	P43657	344 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	FCN2	Q15485	313 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	PPP1R27	Q86WC6	154 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	LGI3	Q8N145	548 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	LFNG	Q8NES3	379 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	GRPEL2	Q8TAA5	225 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	LHFPL5	Q8TAF8	219 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	DDB2	Q92466	427 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	METTL1	Q9UBP6	276 aa	Known RBP	10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	SHPK	Q9UHJ6	478 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	PRELID3B	Q9Y3B1	194 aa		10.15	□□□□□ -0.78
NPC1-212	ENST00000591107	LCE6A	A0A183	80 aa		10.14	□□□□□ -0.79
NPC1-212	ENST00000591107	HMX3	A6NHT5	357 aa		10.14	□□□□□ -0.79
NPC1-212	ENST00000591107	GOSR2	O14653	212 aa		10.14	□□□□□ -0.79
NPC1-212	ENST00000591107	APOA2	P02652	100 aa		10.14	□□□□□ -0.79
NPC1-212	ENST00000591107	SERPINE2	P07093	398 aa		10.14	□□□□□ -0.79
NPC1-212	ENST00000591107	IGHV4-30-4	P0DP06	118 aa		10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms