RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 LRTM2Q8N967 370 aa13.93□□□□□ -0.18
VAT1-208ENST00000590924 MINDY2Q8NBR6 621 aa13.93□□□□□ -0.18
VAT1-208ENST00000590924 SPIN2AQ99865 258 aa13.93□□□□□ -0.18
VAT1-208ENST00000590924 SPIN2BQ9BPZ2 258 aa13.93□□□□□ -0.18
VAT1-208ENST00000590924 C20orf85Q9H1P6 137 aa13.93□□□□□ -0.18
VAT1-208ENST00000590924 PRNDQ9UKY0 176 aa13.93□□□□□ -0.18
VAT1-208ENST00000590924 TRAV41A0A0B4J266 112 aa13.92□□□□□ -0.18
VAT1-208ENST00000590924 DUXBA0A1W2PPF3 345 aa13.92□□□□□ -0.18
VAT1-208ENST00000590924 OR4E1P0C645 316 aa13.92□□□□□ -0.18
VAT1-208ENST00000590924 P0C879 139 aa13.92□□□□□ -0.18
VAT1-208ENST00000590924 PPIFP30405 207 aaKnown RBP13.92□□□□□ -0.18
VAT1-208ENST00000590924 GNB1P62873 340 aa13.92□□□□□ -0.18
VAT1-208ENST00000590924 PPP1R1AQ13522 171 aa13.92□□□□□ -0.18
VAT1-208ENST00000590924 C19orf54Q5BKX5 351 aa13.92□□□□□ -0.18
VAT1-208ENST00000590924 ENKURQ8TC29 256 aa13.92□□□□□ -0.18
VAT1-208ENST00000590924 SRSF12Q8WXF0 261 aaKnown RBP13.92□□□□□ -0.18
VAT1-208ENST00000590924 LSM10Q969L4 123 aaKnown RBP13.92□□□□□ -0.18
VAT1-208ENST00000590924 RRNAD1Q96FB5 475 aaKnown RBP13.92□□□□□ -0.18
VAT1-208ENST00000590924 UBE2E2Q96LR5 201 aa13.92□□□□□ -0.18
VAT1-208ENST00000590924 FBXO7Q9Y3I1 522 aa13.92□□□□□ -0.18
VAT1-208ENST00000590924 LSM4Q9Y4Z0 139 aaKnown RBP13.92□□□□□ -0.18
VAT1-208ENST00000590924 A0A0B4J2A0 478 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 C9orf170A2RU37 121 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 MSGN1A6NI15 193 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 SEC14L6B5MCN3 397 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 IGKV1-5P01602 117 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 H2AFB2P0C5Z0 115 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 VAMP1P23763 118 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 RPL27AP46776 148 aaKnown RBP13.91□□□□□ -0.18
VAT1-208ENST00000590924 AKR1C2P52895 323 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 TMEM268Q5VZI3 342 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 THOC7Q6I9Y2 204 aaKnown RBP13.91□□□□□ -0.18
VAT1-208ENST00000590924 LHFPL5Q8TAF8 219 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 ABHD5Q8WTS1 349 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 SRSF8Q9BRL6 282 aaKnown RBP13.91□□□□□ -0.18
VAT1-208ENST00000590924 COMMD5Q9GZQ3 224 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 TMEM14BQ9NUH8 114 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 NUDT15Q9NV35 164 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 SHPKQ9UHJ6 478 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 TENM3Q9P273 2699 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 NBEAL2Q6ZNJ1 2754 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 TNCP24821 2201 aa13.91□□□□□ -0.18
VAT1-208ENST00000590924 TRAV3A0A0B4J244 114 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 IGLV1-40P01703 118 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 OR9G9P0C7N8 305 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 NHLRC4P0CG21 123 aaPredicted RBP13.9□□□□□ -0.18
VAT1-208ENST00000590924 RUNX1Q01196 453 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 KIAA0141Q14154 515 aaPredicted RBP13.9□□□□□ -0.18
VAT1-208ENST00000590924 NRARPQ7Z6K4 114 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 LYG2Q86SG7 212 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 LFNGQ8NES3 379 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 OR11H1Q8NG94 326 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 OR5B3Q8NH48 314 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 OR4A16Q8NH70 328 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 GRPEL2Q8TAA5 225 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 PRR25Q96S07 402 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 KLK15Q9H2R5 256 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 CACFD1Q9UGQ2 172 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 FOXA2Q9Y261 457 aaPredicted RBP13.9□□□□□ -0.18
VAT1-208ENST00000590924 ZNF257Q9Y2Q1 563 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 WSB1Q9Y6I7 421 aa13.9□□□□□ -0.18
VAT1-208ENST00000590924 TEX50A0A1B0GTY4 177 aa13.89□□□□□ -0.19
VAT1-208ENST00000590924 C15orf61A6NNL5 157 aa13.89□□□□□ -0.19
VAT1-208ENST00000590924 G3V318 75 aa13.89□□□□□ -0.19
VAT1-208ENST00000590924 I3L521 148 aa13.89□□□□□ -0.19
VAT1-208ENST00000590924 BRI3O95415 125 aa13.89□□□□□ -0.19
VAT1-208ENST00000590924 HLA-AP01891 365 aaKnown RBP13.89□□□□□ -0.19
VAT1-208ENST00000590924 ANXA7P20073 488 aaKnown RBP13.89□□□□□ -0.19
VAT1-208ENST00000590924 OR2B8PP59922 312 aa13.89□□□□□ -0.19
VAT1-208ENST00000590924 DHRS2Q13268 280 aa13.89□□□□□ -0.19
VAT1-208ENST00000590924 TMEM65Q6PI78 240 aa13.89□□□□□ -0.19
VAT1-208ENST00000590924 UNQ5815/PRO19632Q6UWF5 114 aa13.89□□□□□ -0.19
VAT1-208ENST00000590924 HSD17B13Q7Z5P4 300 aaPredicted RBP13.89□□□□□ -0.19
VAT1-208ENST00000590924 ZNF429Q86V71 674 aa13.89□□□□□ -0.19
VAT1-208ENST00000590924 ZNF491Q8N8L2 437 aa13.89□□□□□ -0.19
VAT1-208ENST00000590924 OR1L8Q8NGR8 309 aa13.89□□□□□ -0.19
VAT1-208ENST00000590924 FAM103A1Q9BTL3 118 aaKnown RBP13.89□□□□□ -0.19
VAT1-208ENST00000590924 GNB4Q9HAV0 340 aa13.89□□□□□ -0.19
VAT1-208ENST00000590924 TRAV6A0A075B6T7 132 aa13.88□□□□□ -0.19
VAT1-208ENST00000590924 OR8U8P0C7N1 319 aa13.88□□□□□ -0.19
VAT1-208ENST00000590924 INSL3P51460 131 aa13.88□□□□□ -0.19
VAT1-208ENST00000590924 ZNF616Q08AN1 781 aa13.88□□□□□ -0.19
VAT1-208ENST00000590924 ANKRD55Q3KP44 614 aa13.88□□□□□ -0.19
VAT1-208ENST00000590924 C4orf46Q504U0 113 aa13.88□□□□□ -0.19
VAT1-208ENST00000590924 ASPHD1Q5U4P2 390 aa13.88□□□□□ -0.19
VAT1-208ENST00000590924 PLET1Q6UQ28 207 aa13.88□□□□□ -0.19
VAT1-208ENST00000590924 SLC35G3Q8N808 338 aa13.88□□□□□ -0.19
VAT1-208ENST00000590924 COQ8AQ8NI60 647 aa13.88□□□□□ -0.19
VAT1-208ENST00000590924 RNASE11Q8TAA1 199 aaKnown RBP13.88□□□□□ -0.19
VAT1-208ENST00000590924 PHB2Q99623 299 aa13.88□□□□□ -0.19
VAT1-208ENST00000590924 QTRT1Q9BXR0 403 aaKnown RBP13.88□□□□□ -0.19
VAT1-208ENST00000590924 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.88□□□□□ -0.19
VAT1-208ENST00000590924 OR51B2Q9Y5P1 312 aa13.88□□□□□ -0.19
VAT1-208ENST00000590924 A0A0B4J293 547 aa13.87□□□□□ -0.19
VAT1-208ENST00000590924 TEX22C9J3V5 150 aa13.87□□□□□ -0.19
VAT1-208ENST00000590924 H3BUA1 57 aa13.87□□□□□ -0.19
VAT1-208ENST00000590924 IL5P05113 134 aa13.87□□□□□ -0.19
VAT1-208ENST00000590924 TRAPPC2P0DI81 140 aa13.87□□□□□ -0.19
VAT1-208ENST00000590924 TRAPPC2BP0DI82 140 aa13.87□□□□□ -0.19
VAT1-208ENST00000590924 HSPE1P61604 102 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms