RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 CX3CL1P78423 397 aa13.09□□□□□ -0.31
GCDH-213ENST00000590627 ID3Q02535 119 aa13.09□□□□□ -0.31
GCDH-213ENST00000590627 CLCC1Q96S66 551 aa13.09□□□□□ -0.31
GCDH-213ENST00000590627 PDCD10Q9BUL8 212 aa13.09□□□□□ -0.31
GCDH-213ENST00000590627 COMMD5Q9GZQ3 224 aa13.09□□□□□ -0.31
GCDH-213ENST00000590627 GSKIPQ9P0R6 139 aa13.09□□□□□ -0.31
GCDH-213ENST00000590627 TEX50A0A1B0GTY4 177 aa13.08□□□□□ -0.32
GCDH-213ENST00000590627 BLCAPP62952 87 aa13.08□□□□□ -0.32
GCDH-213ENST00000590627 FXYD3Q14802 87 aa13.08□□□□□ -0.32
GCDH-213ENST00000590627 TNXAQ16473 311 aa13.08□□□□□ -0.32
GCDH-213ENST00000590627 CXorf66Q5JRM2 361 aaPredicted RBP13.08□□□□□ -0.32
GCDH-213ENST00000590627 OR1L8Q8NGR8 309 aa13.08□□□□□ -0.32
GCDH-213ENST00000590627 NPFFR1Q9GZQ6 430 aa13.08□□□□□ -0.32
GCDH-213ENST00000590627 C16orf95Q9H693 158 aa13.08□□□□□ -0.32
GCDH-213ENST00000590627 NDUFA4L2Q9NRX3 87 aa13.08□□□□□ -0.32
GCDH-213ENST00000590627 IGHG2P01859 326 aa13.07□□□□□ -0.32
GCDH-213ENST00000590627 MYOD1P15172 320 aa13.07□□□□□ -0.32
GCDH-213ENST00000590627 NKX2-1P43699 371 aaPredicted RBP13.07□□□□□ -0.32
GCDH-213ENST00000590627 RPL27AP46776 148 aaKnown RBP13.07□□□□□ -0.32
GCDH-213ENST00000590627 TNFRSF9Q07011 255 aa13.07□□□□□ -0.32
GCDH-213ENST00000590627 Q6ZSV7 163 aa13.07□□□□□ -0.32
GCDH-213ENST00000590627 HSPB9Q9BQS6 159 aa13.07□□□□□ -0.32
GCDH-213ENST00000590627 SRSF8Q9BRL6 282 aaKnown RBP13.07□□□□□ -0.32
GCDH-213ENST00000590627 ZFP57Q9NU63 452 aa13.07□□□□□ -0.32
GCDH-213ENST00000590627 A0A1B0GW64 132 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 CGB1A6NKQ9 187 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 E7EUB6 86 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 INS-IGF2F8WCM5 200 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 TSPAN9O75954 239 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 CNIH1O95406 144 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 IFNA17P01571 189 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 MBPP02686 304 aaPredicted RBP13.06□□□□□ -0.32
GCDH-213ENST00000590627 CRIP2P52943 208 aaPredicted RBP13.06□□□□□ -0.32
GCDH-213ENST00000590627 RAP2BP61225 183 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 GNB1P62873 340 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 NDPQ00604 133 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 PRCDQ00LT1 54 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 C10orf55Q5SWW7 151 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 Q8N2B8 174 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 SRSF12Q8WXF0 261 aaKnown RBP13.06□□□□□ -0.32
GCDH-213ENST00000590627 ARPC1AQ92747 370 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 WDR89Q96FK6 387 aaPredicted RBP13.06□□□□□ -0.32
GCDH-213ENST00000590627 PRSS22Q9GZN4 317 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 ZNF580Q9UK33 172 aa13.06□□□□□ -0.32
GCDH-213ENST00000590627 SH2D7A6NKC9 451 aaPredicted RBP13.05□□□□□ -0.32
GCDH-213ENST00000590627 MED6O75586 246 aa13.05□□□□□ -0.32
GCDH-213ENST00000590627 EGR2P11161 476 aaPredicted RBP13.05□□□□□ -0.32
GCDH-213ENST00000590627 HSD17B13Q7Z5P4 300 aaPredicted RBP13.05□□□□□ -0.32
GCDH-213ENST00000590627 PLXNB1O43157 2135 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 MSGN1A6NI15 193 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 TEX22C9J3V5 150 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 K7EPK0 472 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 SYNGR2O43760 224 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 LY86O95711 162 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 OPN1MWP04001 364 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 IGF1P05019 195 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 OPN1MW2P0DN77 364 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 OPN1MW3P0DN78 364 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 PSMB6P28072 239 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 CD83Q01151 205 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 RAB32Q13637 225 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 Q6ZS46 218 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 PPP1R1CQ8WVI7 109 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 ST6GAL2Q96JF0 529 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 RBKSQ9H477 322 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 ZNF702PQ9H963 129 aa13.04□□□□□ -0.32
GCDH-213ENST00000590627 A0A1W2PN81 502 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 IGLC7A0M8Q6 106 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 LINC01548A6NM66 108 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 CEBPZOSA8MTT3 80 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 CCNKO75909 580 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 TSPAN15O95858 294 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 CHRNA7P36544 502 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 VDAC2P45880 294 aaPredicted RBP13.03□□□□□ -0.32
GCDH-213ENST00000590627 POLR2GP62487 172 aaKnown RBP eCLIP13.03□□□□□ -0.32
GCDH-213ENST00000590627 C9orf152Q5JTZ5 239 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 SLC35E3Q7Z769 313 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 AKAP14Q86UN6 197 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 MRPL41Q8IXM3 137 aaKnown RBP13.03□□□□□ -0.32
GCDH-213ENST00000590627 GRPEL2Q8TAA5 225 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 TMEM68Q96MH6 324 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 CIB3Q96Q77 187 aaPredicted RBP13.03□□□□□ -0.32
GCDH-213ENST00000590627 PLEKHA3Q9HB20 300 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 RANGRFQ9HD47 186 aaPredicted RBP13.03□□□□□ -0.32
GCDH-213ENST00000590627 RCL1Q9Y2P8 373 aaKnown RBP13.03□□□□□ -0.32
GCDH-213ENST00000590627 FBXO7Q9Y3I1 522 aa13.03□□□□□ -0.32
GCDH-213ENST00000590627 ATP6V0E1O15342 81 aa13.02□□□□□ -0.33
GCDH-213ENST00000590627 NXPH3O95157 252 aa13.02□□□□□ -0.33
GCDH-213ENST00000590627 MPC2O95563 127 aa13.02□□□□□ -0.33
GCDH-213ENST00000590627 SCGB1D2O95969 90 aa13.02□□□□□ -0.33
GCDH-213ENST00000590627 FGL1Q08830 312 aa13.02□□□□□ -0.33
GCDH-213ENST00000590627 AKIRIN2Q53H80 203 aa13.02□□□□□ -0.33
GCDH-213ENST00000590627 TCTE3Q8IZS6 198 aa13.02□□□□□ -0.33
GCDH-213ENST00000590627 OR2T35Q8NGX2 323 aa13.02□□□□□ -0.33
GCDH-213ENST00000590627 DTD1Q8TEA8 209 aa13.02□□□□□ -0.33
GCDH-213ENST00000590627 RAB40CQ96S21 281 aa13.02□□□□□ -0.33
GCDH-213ENST00000590627 HINT2Q9BX68 163 aa13.02□□□□□ -0.33
GCDH-213ENST00000590627 MAGT1Q9H0U3 335 aa13.02□□□□□ -0.33
GCDH-213ENST00000590627 C11orf1Q9H5F2 150 aa13.02□□□□□ -0.33
GCDH-213ENST00000590627 ENY2Q9NPA8 101 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms