RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 OR5B12Q96R08 314 aa8.71□□□□□ -1.02
ZNF540-208ENST00000589857 PCGF1Q9BSM1 259 aa8.71□□□□□ -1.02
ZNF540-208ENST00000589857 C19orf24Q9BVV8 132 aa8.71□□□□□ -1.02
ZNF540-208ENST00000589857 CHODLQ9H9P2 273 aa8.71□□□□□ -1.02
ZNF540-208ENST00000589857 TMEM106BQ9NUM4 274 aa8.71□□□□□ -1.02
ZNF540-208ENST00000589857 OR51B2Q9Y5P1 312 aa8.71□□□□□ -1.02
ZNF540-208ENST00000589857 ARL2-SNX15V9GYD0 113 aa8.71□□□□□ -1.02
ZNF540-208ENST00000589857 PCNX1Q96RV3 2341 aa8.71□□□□□ -1.02
ZNF540-208ENST00000589857 A0A1W2PN81 502 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 AP4M1O00189 453 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 UPK2O00526 184 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 UBE2CO00762 179 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 SLC31A2O15432 143 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 FSTL3O95633 263 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 CXorf1O96002 111 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 CD3EP07766 207 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 SMIM6P0DI80 62 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 CHRNA7P36544 502 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 RPS10P46783 165 aaKnown RBP8.7□□□□□ -1.02
ZNF540-208ENST00000589857 GNG10P50151 68 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 ZNF134P52741 427 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 RHOBP62745 196 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 CCL8P80075 99 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 S100A12P80511 92 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 PRCDQ00LT1 54 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 NCMAPQ5T1S8 102 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 FAM53AQ6NSI3 398 aaPredicted RBP8.7□□□□□ -1.02
ZNF540-208ENST00000589857 ADAM5Q6NVV9 412 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 TEPPQ6URK8 271 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 ZNF833PQ6ZTB9 187 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 IQCF2Q8IXL9 164 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 ZNF383Q8NA42 475 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 TNFRSF14Q92956 283 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 TMEM186Q96B77 213 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 ANAPC16Q96DE5 110 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 SLC35E1Q96K37 410 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 YPEL4Q96NS1 127 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 RNF2Q99496 336 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 KAAG1Q9UBP8 84 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 CELSR1Q9NYQ6 3014 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 MTORP42345 2549 aa8.7□□□□□ -1.02
ZNF540-208ENST00000589857 DOCK7Q96N67 2140 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 hCG_1809904A0A1W2PP81 198 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 A0A1W2PR64 198 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 A0A1W2PRV1 198 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 C5orf52A6NGY3 159 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 PPP1R2P9O14990 202 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 THBDP07204 575 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 APOBEC3AP31941 199 aaPredicted RBP8.69□□□□□ -1.02
ZNF540-208ENST00000589857 MC5RP33032 325 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 RPL35P42766 123 aaKnown RBP8.69□□□□□ -1.02
ZNF540-208ENST00000589857 RPL29P47914 159 aaKnown RBP8.69□□□□□ -1.02
ZNF540-208ENST00000589857 HOXA4Q00056 320 aaPredicted RBP8.69□□□□□ -1.02
ZNF540-208ENST00000589857 ZNF674Q2M3X9 581 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 BSXQ3C1V8 233 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 TMEM177Q53S58 311 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 SPRNQ5BIV9 151 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 SPINK9Q5DT21 86 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 FAM201AQ5SY85 155 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 WDR25Q64LD2 544 aaPredicted RBP8.69□□□□□ -1.02
ZNF540-208ENST00000589857 TREML4Q6UXN2 200 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 PDPNQ86YL7 162 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 DMRTC2Q8IXT2 367 aaPredicted RBP8.69□□□□□ -1.02
ZNF540-208ENST00000589857 ZFP82Q8N141 532 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 OR1L8Q8NGR8 309 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 OR4F5Q8NH21 305 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 ZNF596Q8TC21 504 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 C2CD4CQ8TF44 421 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 RNASE6Q93091 150 aaKnown RBP8.69□□□□□ -1.02
ZNF540-208ENST00000589857 PLPPR2Q96GM1 343 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 OR4F4Q96R69 305 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 SSX3Q99909 188 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 PXMP4Q9Y6I8 212 aa8.69□□□□□ -1.02
ZNF540-208ENST00000589857 TRBV24-1A0A075B6N3 115 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 C11orf94C9JXX5 98 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 PRSS46E5RG02 174 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 INS-IGF2F8WCM5 200 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 J3QR06 171 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 CLN5O75503 358 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 IGKV1D-33P01593 117 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 IGKV1-33P01594 117 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 FBP1P09467 338 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 SELLP14151 372 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 HOXB4P17483 251 aaPredicted RBP8.68□□□□□ -1.02
ZNF540-208ENST00000589857 USF1P22415 310 aaPredicted RBP8.68□□□□□ -1.02
ZNF540-208ENST00000589857 SUB1P53999 127 aaKnown RBP eCLIP8.68□□□□□ -1.02
ZNF540-208ENST00000589857 CD81P60033 236 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 ERHP84090 104 aaKnown RBP8.68□□□□□ -1.02
ZNF540-208ENST00000589857 KIAA0141Q14154 515 aaPredicted RBP8.68□□□□□ -1.02
ZNF540-208ENST00000589857 ELOBQ15370 118 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 ADIRFQ15847 76 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 FBXL19-AS1Q494R0 122 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 C2orf83Q53S99 150 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 KCNIP4Q6PIL6 250 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 SSX7Q7RTT5 188 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 TCF23Q7RTU1 214 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 OR10X1Q8NGY0 326 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 FAM210BQ96KR6 192 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 UHRF2Q96PU4 802 aa8.68□□□□□ -1.02
ZNF540-208ENST00000589857 GGTLC1Q9BX51 225 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms