RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ZNF585BQ52M93 769 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 PIP4P1Q86T03 277 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 PRSS33Q8NF86 280 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 OR2T6Q8NHC8 308 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 REV3LO60673 3130 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 POLQO75417 2590 aa12.1□□□□□ -0.47
RETREG3-208ENST00000589797 FAM90A26D6RGX4 464 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 PMCHP20382 165 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 CRYBB3P26998 211 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 GLRX5Q86SX6 157 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 STPG3Q8N7X2 389 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 OR5AU1Q8NGC0 362 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 MARVELD3Q96A59 401 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 SRD5A3Q9H8P0 318 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 MBD3L4A6NDZ8 208 aaPredicted RBP12.09□□□□□ -0.47
RETREG3-208ENST00000589797 MBD3L3A6NE82 208 aaPredicted RBP12.09□□□□□ -0.47
RETREG3-208ENST00000589797 MBD3L5A6NJ08 208 aaPredicted RBP12.09□□□□□ -0.47
RETREG3-208ENST00000589797 TIMP3P35625 211 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 ATP5G3P48201 142 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 DEFA6Q01524 100 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 TCF15Q12870 199 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 MLANAQ16655 118 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 C10orf113Q5VZT2 155 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 MBD3L2Q8NHZ7 208 aaPredicted RBP12.09□□□□□ -0.47
RETREG3-208ENST00000589797 WASHC3Q9Y3C0 194 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 FAM215AQ9Y5M1 114 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 TMSB15BA0A087X1C1 80 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 A1L4Q6 167 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 RAB4AP20338 218 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 CEACAM3P40198 252 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 PNRC1Q12796 327 aaPredicted RBP12.09□□□□□ -0.47
RETREG3-208ENST00000589797 SPRNQ5BIV9 151 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 OR4C13Q8NGP0 309 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 OR9G1Q8NH87 305 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 BARX1Q9HBU1 254 aaPredicted RBP12.09□□□□□ -0.47
RETREG3-208ENST00000589797 MANBALQ9NQG1 85 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 ZNF785A8K8V0 405 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 CXorf1O96002 111 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 CT45A10P0DMU9 189 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 LCN2P80188 198 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 KLRB1Q12918 225 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 PMS2P11Q13670 270 aa12.09□□□□□ -0.47
RETREG3-208ENST00000589797 EPG5Q9HCE0 2579 aa12.08□□□□□ -0.48
RETREG3-208ENST00000589797 SRP19P09132 144 aaKnown RBP12.08□□□□□ -0.48
RETREG3-208ENST00000589797 KRTDAPP60985 99 aa12.08□□□□□ -0.48
RETREG3-208ENST00000589797 PAX5Q02548 391 aa12.08□□□□□ -0.48
RETREG3-208ENST00000589797 PPP1R14DQ9NXH3 145 aa12.08□□□□□ -0.48
RETREG3-208ENST00000589797 IGHV3-23P01764 117 aa12.08□□□□□ -0.48
RETREG3-208ENST00000589797 IER3P46695 156 aa12.08□□□□□ -0.48
RETREG3-208ENST00000589797 LYPD2Q6UXB3 125 aa12.08□□□□□ -0.48
RETREG3-208ENST00000589797 ZNF705AQ6ZN79 300 aaPredicted RBP12.08□□□□□ -0.48
RETREG3-208ENST00000589797 KDF1Q8NAX2 398 aaPredicted RBP12.08□□□□□ -0.48
RETREG3-208ENST00000589797 DIRC2Q96SL1 478 aa12.08□□□□□ -0.48
RETREG3-208ENST00000589797 NABP2Q9BQ15 211 aa12.08□□□□□ -0.48
RETREG3-208ENST00000589797 C1QTNF9BB2RNN3 333 aa12.08□□□□□ -0.48
RETREG3-208ENST00000589797 PDPNQ86YL7 162 aa12.08□□□□□ -0.48
RETREG3-208ENST00000589797 ZCCHC14Q8WYQ9 949 aaKnown RBP12.08□□□□□ -0.48
RETREG3-208ENST00000589797 RASL11BQ9BPW5 248 aa12.08□□□□□ -0.48
RETREG3-208ENST00000589797 ELOVL5Q9NYP7 299 aa12.08□□□□□ -0.48
RETREG3-208ENST00000589797 SAA1P0DJI8 122 aaPredicted RBP12.07□□□□□ -0.48
RETREG3-208ENST00000589797 ADCYAP1P18509 176 aa12.07□□□□□ -0.48
RETREG3-208ENST00000589797 CSN1S1P47710 185 aa12.07□□□□□ -0.48
RETREG3-208ENST00000589797 B9A039 149 aa12.07□□□□□ -0.48
RETREG3-208ENST00000589797 CGAP01215 116 aa12.07□□□□□ -0.48
RETREG3-208ENST00000589797 TRAV20A0A0B4J274 112 aa12.07□□□□□ -0.48
RETREG3-208ENST00000589797 MEOX2P50222 304 aa12.07□□□□□ -0.48
RETREG3-208ENST00000589797 KIAA1644Q3SXP7 199 aa12.07□□□□□ -0.48
RETREG3-208ENST00000589797 GPR61Q9BZJ8 451 aa12.07□□□□□ -0.48
RETREG3-208ENST00000589797 CLEC5AQ9NY25 188 aa12.07□□□□□ -0.48
RETREG3-208ENST00000589797 K7EQM0 130 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 OR5I1Q13606 314 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 ADIPOQQ15848 244 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 PQLC2Q6ZP29 291 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 OR8I2Q8N0Y5 310 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 RPP25LQ8N5L8 163 aaKnown RBP12.06□□□□□ -0.48
RETREG3-208ENST00000589797 MS4A10Q96PG2 267 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 FREM2Q5SZK8 3169 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 TRAV34A0A0B4J273 112 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 CHEK1O14757 476 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 IGKV1-16P04430 117 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 HTR1DP28221 377 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 TCTEX1D1Q8N7M0 179 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 EML5Q05BV3 1969 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 ZNF98A6NK75 572 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 YPEL1O60688 119 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 CSN3P07498 182 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 ZNF596Q8TC21 504 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 SSC4DQ8WTU2 575 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 YPEL2Q96QA6 119 aa12.06□□□□□ -0.48
RETREG3-208ENST00000589797 IGHV3-49A0A0A0MS15 119 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 IGKV1-39P01597 117 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 IGKV1D-39P04432 117 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 FABP1P07148 127 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 IL6RP08887 468 aaPredicted RBP12.05□□□□□ -0.48
RETREG3-208ENST00000589797 SSX7Q7RTT5 188 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 EIF4E3Q8N5X7 224 aaKnown RBP12.05□□□□□ -0.48
RETREG3-208ENST00000589797 CLDND2Q8NHS1 167 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 PAXXQ9BUH6 204 aa12.05□□□□□ -0.48
RETREG3-208ENST00000589797 SSBP3Q9BWW4 388 aaPredicted RBP12.05□□□□□ -0.48
RETREG3-208ENST00000589797 DKK4Q9UBT3 224 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms