RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 PDLIM3Q53GG5 364 aaPredicted RBP11.94□□□□□ -0.5
ATG4D-211ENST00000589753 AKIRIN2Q53H80 203 aa11.94□□□□□ -0.5
ATG4D-211ENST00000589753 SPINK9Q5DT21 86 aa11.94□□□□□ -0.5
ATG4D-211ENST00000589753 UNQ5815/PRO19632Q6UWF5 114 aa11.94□□□□□ -0.5
ATG4D-211ENST00000589753 OR4D5Q8NGN0 318 aa11.94□□□□□ -0.5
ATG4D-211ENST00000589753 C2orf50Q96LR7 162 aa11.94□□□□□ -0.5
ATG4D-211ENST00000589753 TMEM68Q96MH6 324 aa11.94□□□□□ -0.5
ATG4D-211ENST00000589753 SRSF8Q9BRL6 282 aaKnown RBP11.94□□□□□ -0.5
ATG4D-211ENST00000589753 GON7Q9BXV9 100 aa11.94□□□□□ -0.5
ATG4D-211ENST00000589753 HSPB7Q9UBY9 170 aa11.94□□□□□ -0.5
ATG4D-211ENST00000589753 A0A1W2PN81 502 aa11.93□□□□□ -0.5
ATG4D-211ENST00000589753 CLPSL1A2RUU4 121 aa11.93□□□□□ -0.5
ATG4D-211ENST00000589753 FAM90A26D6RGX4 464 aa11.93□□□□□ -0.5
ATG4D-211ENST00000589753 MDKP21741 143 aaPredicted RBP11.93□□□□□ -0.5
ATG4D-211ENST00000589753 CHRNA7P36544 502 aa11.93□□□□□ -0.5
ATG4D-211ENST00000589753 HOXA1P49639 335 aaPredicted RBP11.93□□□□□ -0.5
ATG4D-211ENST00000589753 TNFRSF9Q07011 255 aa11.93□□□□□ -0.5
ATG4D-211ENST00000589753 FCN2Q15485 313 aa11.93□□□□□ -0.5
ATG4D-211ENST00000589753 CXorf66Q5JRM2 361 aaPredicted RBP11.93□□□□□ -0.5
ATG4D-211ENST00000589753 ASPHD1Q5U4P2 390 aa11.93□□□□□ -0.5
ATG4D-211ENST00000589753 HSD17B13Q7Z5P4 300 aaPredicted RBP11.93□□□□□ -0.5
ATG4D-211ENST00000589753 MRPL41Q8IXM3 137 aaKnown RBP11.93□□□□□ -0.5
ATG4D-211ENST00000589753 OR10W1Q8NGF6 305 aa11.93□□□□□ -0.5
ATG4D-211ENST00000589753 PLEKHA3Q9HB20 300 aa11.93□□□□□ -0.5
ATG4D-211ENST00000589753 ENY2Q9NPA8 101 aa11.93□□□□□ -0.5
ATG4D-211ENST00000589753 RNF114Q9Y508 228 aa11.93□□□□□ -0.5
ATG4D-211ENST00000589753 A0A1B0GUS0 222 aa11.92□□□□□ -0.5
ATG4D-211ENST00000589753 IGLC7A0M8Q6 106 aa11.92□□□□□ -0.5
ATG4D-211ENST00000589753 CEBPZOSA8MTT3 80 aa11.92□□□□□ -0.5
ATG4D-211ENST00000589753 AREGP15514 252 aa11.92□□□□□ -0.5
ATG4D-211ENST00000589753 NKX2-1P43699 371 aaPredicted RBP11.92□□□□□ -0.5
ATG4D-211ENST00000589753 H2BFSP57053 126 aa11.92□□□□□ -0.5
ATG4D-211ENST00000589753 SLC35B1P78383 322 aa11.92□□□□□ -0.5
ATG4D-211ENST00000589753 ID3Q02535 119 aa11.92□□□□□ -0.5
ATG4D-211ENST00000589753 FOXL1Q12952 345 aa11.92□□□□□ -0.5
ATG4D-211ENST00000589753 C19orf54Q5BKX5 351 aa11.92□□□□□ -0.5
ATG4D-211ENST00000589753 CENPVQ7Z7K6 275 aaPredicted RBP11.92□□□□□ -0.5
ATG4D-211ENST00000589753 OR11H7Q8NGC8 314 aa11.92□□□□□ -0.5
ATG4D-211ENST00000589753 WNT10AQ9GZT5 417 aa11.92□□□□□ -0.5
ATG4D-211ENST00000589753 RBKSQ9H477 322 aa11.92□□□□□ -0.5
ATG4D-211ENST00000589753 TET2Q6N021 2002 aaPredicted RBP11.91□□□□□ -0.5
ATG4D-211ENST00000589753 TMEM89A2RUT3 159 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 PSMB11A5LHX3 300 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 PLXNB1O43157 2135 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 MED6O75586 246 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 SCGB1D2O95969 90 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 OR13C7P0DN81 318 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 CXCL3P19876 107 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 PPIFP30405 207 aaKnown RBP11.91□□□□□ -0.5
ATG4D-211ENST00000589753 CYCSP99999 105 aaKnown RBP11.91□□□□□ -0.5
ATG4D-211ENST00000589753 CFHR3Q02985 330 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 WT1-ASQ06250 92 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 TTC9CQ8N5M4 171 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 KLHDC1Q8N7A1 406 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 OR5T1Q8NG75 326 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 FAM110DQ8TAY7 271 aaPredicted RBP11.91□□□□□ -0.5
ATG4D-211ENST00000589753 C19orf24Q9BVV8 132 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 NMES1Q9C002 83 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 MAGT1Q9H0U3 335 aa11.91□□□□□ -0.5
ATG4D-211ENST00000589753 TNCP24821 2201 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 NPIPB5A8MRT5 1133 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 INS-IGF2F8WCM5 200 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 HAX1O00165 279 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 WRBO00258 174 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 SYNGR2O43760 224 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 REG1AP05451 166 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 PSMB6P28072 239 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 PROK1P58294 105 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 ERHP84090 104 aaKnown RBP11.9□□□□□ -0.5
ATG4D-211ENST00000589753 ZNF329Q86UD4 541 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 OR2C3Q8N628 320 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 DTD1Q8TEA8 209 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 TMEM158Q8WZ71 300 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 HIPK2Q9H2X6 1198 aa11.9□□□□□ -0.5
ATG4D-211ENST00000589753 HEYLQ9NQ87 328 aaPredicted RBP11.9□□□□□ -0.5
ATG4D-211ENST00000589753 SOX15O60248 233 aa11.89□□□□□ -0.51
ATG4D-211ENST00000589753 FBXO24O75426 580 aa11.89□□□□□ -0.51
ATG4D-211ENST00000589753 MBPP02686 304 aaPredicted RBP11.89□□□□□ -0.51
ATG4D-211ENST00000589753 CRYGCP07315 174 aa11.89□□□□□ -0.51
ATG4D-211ENST00000589753 CTRB1P17538 263 aa11.89□□□□□ -0.51
ATG4D-211ENST00000589753 RIPPLY3P57055 190 aa11.89□□□□□ -0.51
ATG4D-211ENST00000589753 POLR2GP62487 172 aaKnown RBP eCLIP11.89□□□□□ -0.51
ATG4D-211ENST00000589753 SRSF4Q08170 494 aaKnown RBP11.89□□□□□ -0.51
ATG4D-211ENST00000589753 IL15RAQ13261 267 aa11.89□□□□□ -0.51
ATG4D-211ENST00000589753 CTRB2Q6GPI1 263 aa11.89□□□□□ -0.51
ATG4D-211ENST00000589753 C10orf99Q6UWK7 81 aa11.89□□□□□ -0.51
ATG4D-211ENST00000589753 NF1P21359 2839 aa11.89□□□□□ -0.51
ATG4D-211ENST00000589753 C2CD3Q4AC94 2353 aa11.89□□□□□ -0.51
ATG4D-211ENST00000589753 hCG_2014768A0A024R1R8 64 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 SSSCA1O60232 199 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 IGLV1-40P01703 118 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 IGHG4P01861 327 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 IAPPP10997 89 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 DEFA4P12838 97 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 SNCAP37840 140 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 S100A10P60903 97 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 RAB32Q13637 225 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 AWAT1Q58HT5 328 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 TEX38Q6PEX7 206 aa11.88□□□□□ -0.51
ATG4D-211ENST00000589753 COMMD1Q8N668 190 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms