RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 G3V318 75 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 H0Y980 276 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 SHOXO15266 292 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 SLC31A2O15432 143 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 MPPED1O15442 326 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 PLA2G10O15496 165 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 RBFOX2O43251 390 aaKnown RBP eCLIP4.59□□□□□ -1.67
VPS25-204ENST00000589577 TNFSF12O43508 249 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 FCGR3BO75015 233 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 RBMXL2O75526 392 aaKnown RBP4.59□□□□□ -1.67
VPS25-204ENST00000589577 IFNA21P01568 189 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 HLA-AP01891 365 aaKnown RBP4.59□□□□□ -1.67
VPS25-204ENST00000589577 ZNF735P0CB33 412 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 IGKV1-13P0DP09 117 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 VDAC1P21796 283 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 F2RP25116 425 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 CD1BP29016 333 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 DUTP33316 252 aaKnown RBP4.59□□□□□ -1.67
VPS25-204ENST00000589577 REG1BP48304 166 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 RPS16P62249 146 aaKnown RBP4.59□□□□□ -1.67
VPS25-204ENST00000589577 EBI3Q14213 229 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 RBMY1FQ15415 496 aaKnown RBP4.59□□□□□ -1.67
VPS25-204ENST00000589577 RPL39P5Q59GN2 51 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 ZNF660Q6AZW8 331 aaPredicted RBP4.59□□□□□ -1.67
VPS25-204ENST00000589577 THOC7Q6I9Y2 204 aaKnown RBP4.59□□□□□ -1.67
VPS25-204ENST00000589577 LIN54Q6MZP7 749 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 IL34Q6ZMJ4 242 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 ZNF833PQ6ZTB9 187 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 NRARPQ7Z6K4 114 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 TBC1D26Q86UD7 250 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 GTSCR1Q86UQ5 136 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 SPAG16Q8N0X2 631 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 LGI3Q8N145 548 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 DMBX1Q8NFW5 382 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 OR8H1Q8NGG4 311 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 OR2T10Q8NGZ9 312 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 VSTM2AQ8TAG5 236 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 OSR1Q8TAX0 266 aaPredicted RBP4.59□□□□□ -1.67
VPS25-204ENST00000589577 CASTOR1Q8WTX7 329 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 FLYWCH2Q96CP2 140 aaKnown RBP4.59□□□□□ -1.67
VPS25-204ENST00000589577 CYYR1Q96J86 154 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 EAF1Q96JC9 268 aaPredicted RBP4.59□□□□□ -1.67
VPS25-204ENST00000589577 HARBI1Q96MB7 349 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 PHB2Q99623 299 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 SPIN2AQ99865 258 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 SPIN2BQ9BPZ2 258 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 AGMATQ9BSE5 352 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 PDCD10Q9BUL8 212 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 MRPL20Q9BYC9 149 aaKnown RBP4.59□□□□□ -1.67
VPS25-204ENST00000589577 PARP12Q9H0J9 701 aaKnown RBP4.59□□□□□ -1.67
VPS25-204ENST00000589577 NAA60Q9H7X0 242 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 FAM212BQ9NTI7 297 aaPredicted RBP4.59□□□□□ -1.67
VPS25-204ENST00000589577 COMMD9Q9P000 198 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 CACFD1Q9UGQ2 172 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 TBC1D24Q9ULP9 559 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 GPR132Q9UNW8 380 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 FBXO7Q9Y3I1 522 aa4.59□□□□□ -1.67
VPS25-204ENST00000589577 HMCN2Q8NDA2 5059 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 CRYM-AS1A6NIL9 109 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 NCBP2LA6PVI3 153 aaKnown RBP4.58□□□□□ -1.68
VPS25-204ENST00000589577 SSNA1O43805 119 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 PGLYRP1O75594 196 aaPredicted RBP4.58□□□□□ -1.68
VPS25-204ENST00000589577 SNAPC5O75971 98 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 SPDEFO95238 335 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 CRYZL1O95825 349 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 HPRT1P00492 218 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 MOSP00540 346 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 LGALS1P09382 135 aaKnown RBP4.58□□□□□ -1.68
VPS25-204ENST00000589577 NQO2P16083 231 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 PI3P19957 117 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 LGALS7P47929 136 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 RAB9AP51151 201 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 ZNF134P52741 427 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 TNFRSF9Q07011 255 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 MMDQ15546 238 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 OR2B11Q5JQS5 317 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 H2BFWTQ7Z2G1 175 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 C5orf24Q7Z6I8 188 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 LYG2Q86SG7 212 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 SLC25A42Q86VD7 318 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 DEFB125Q8N687 156 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 DRAXINQ8NBI3 349 aaPredicted RBP4.58□□□□□ -1.68
VPS25-204ENST00000589577 UXS1Q8NBZ7 420 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 DUSP18Q8NEJ0 188 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 PHLDA1Q8WV24 401 aaPredicted RBP4.58□□□□□ -1.68
VPS25-204ENST00000589577 RBPMSQ93062 196 aaKnown RBP4.58□□□□□ -1.68
VPS25-204ENST00000589577 GALNT14Q96FL9 552 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 CLCC1Q96S66 551 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 RNF5Q99942 180 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 C5orf66Q9H5L9 145 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 PLEKHA2Q9HB19 425 aa4.58□□□□□ -1.68
VPS25-204ENST00000589577 IGHV3-72A0A0B4J1Y9 119 aa4.57□□□□□ -1.68
VPS25-204ENST00000589577 DUXBA0A1W2PPF3 345 aa4.57□□□□□ -1.68
VPS25-204ENST00000589577 MSGN1A6NI15 193 aa4.57□□□□□ -1.68
VPS25-204ENST00000589577 SNRPGP15A8MWD9 76 aa4.57□□□□□ -1.68
VPS25-204ENST00000589577 H0YJW9 148 aa4.57□□□□□ -1.68
VPS25-204ENST00000589577 SOX15O60248 233 aa4.57□□□□□ -1.68
VPS25-204ENST00000589577 CNIH1O95406 144 aa4.57□□□□□ -1.68
VPS25-204ENST00000589577 SFT2D2O95562 160 aa4.57□□□□□ -1.68
VPS25-204ENST00000589577 IL5P05113 134 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms