RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 C16orf82Q7Z2V1 217 aa6.08□□□□□ -1.44
ZNF540-206ENST00000589117 OR51G1Q8NGK1 321 aa6.08□□□□□ -1.44
ZNF540-206ENST00000589117 GAFA1Q96PS6 74 aa6.08□□□□□ -1.44
ZNF540-206ENST00000589117 CCL13Q99616 98 aa6.08□□□□□ -1.44
ZNF540-206ENST00000589117 C19orf24Q9BVV8 132 aa6.08□□□□□ -1.44
ZNF540-206ENST00000589117 USF3Q68DE3 2245 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 C17orf100A8MU93 164 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 TRGC1P0CF51 173 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 RPL29P47914 159 aaKnown RBP6.07□□□□□ -1.44
ZNF540-206ENST00000589117 LCN2P80188 198 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 RPRMLQ8N4K4 120 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 OR2T10Q8NGZ9 312 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 OR5B3Q8NH48 314 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 OSR1Q8TAX0 266 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-206ENST00000589117 UHRF2Q96PU4 802 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 IMMP2LQ96T52 175 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 GGTLC1Q9BX51 225 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 HINT2Q9BX68 163 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 CHODLQ9H9P2 273 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 SLC35D1Q9NTN3 355 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 SLC25A10Q9UBX3 287 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-206ENST00000589117 GTF3C1Q12789 2109 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 OTOGLQ3ZCN5 2332 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 SLC31A2O15432 143 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 IGLV1-40P01703 118 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 PFN1P07737 140 aaKnown RBP6.07□□□□□ -1.44
ZNF540-206ENST00000589117 OR4A8P0C604 315 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 STAG3L2P0CL84 134 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 STAG3L3P0CL85 134 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 RPL31P62899 125 aaKnown RBP6.07□□□□□ -1.44
ZNF540-206ENST00000589117 CCL8P80075 99 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 RPL19P84098 196 aaKnown RBP6.07□□□□□ -1.44
ZNF540-206ENST00000589117 RBPJQ06330 500 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 FAM201AQ5SY85 155 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 SPNS3Q6ZMD2 512 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 DOLPP1Q86YN1 238 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 STPG3Q8N7X2 389 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 VSTM2AQ8TAG5 236 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 LEAP2Q969E1 77 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 PFDN5Q99471 154 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 MGST2Q99735 147 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 SSX3Q99909 188 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 PYGO2Q9BRQ0 406 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 SAP30LQ9HAJ7 183 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 PATZ1Q9HBE1 687 aaKnown RBP6.07□□□□□ -1.44
ZNF540-206ENST00000589117 TPSG1Q9NRR2 321 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 MIOXQ9UGB7 285 aa6.07□□□□□ -1.44
ZNF540-206ENST00000589117 LSM4Q9Y4Z0 139 aaKnown RBP6.07□□□□□ -1.44
ZNF540-206ENST00000589117 PRSS46E5RG02 174 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 NDUFB4O95168 129 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 ARL14EPLP0DKL9 152 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 GNG10P50151 68 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 ERHP84090 104 aaKnown RBP6.06□□□□□ -1.44
ZNF540-206ENST00000589117 PRCDQ00LT1 54 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 SPRNQ5BIV9 151 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 LRRC10Q5BKY1 277 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 GFRALQ6UXV0 394 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 ZNF383Q8NA42 475 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 ZNF439Q8NDP4 499 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 FRZBQ92765 325 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 ACY3Q96HD9 319 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 ZNF714Q96N38 554 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 COMMD5Q9GZQ3 224 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 GSN-AS1Q9NRJ2 163 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 BET1LQ9NYM9 111 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 ARL2-SNX15V9GYD0 113 aa6.06□□□□□ -1.44
ZNF540-206ENST00000589117 EP300Q09472 2414 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-206ENST00000589117 PPIAL4EA0A075B759 164 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 TRAV3A0A0B4J244 114 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 MDFIC2A0A1B0GVS7 189 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 A0A1W2PPQ1 181 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 PPIAL4DF5H284 164 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 UPK2O00526 184 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 NDUFB3O43676 98 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 CA2P00918 260 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 IL6RP08887 468 aaPredicted RBP6.05□□□□□ -1.44
ZNF540-206ENST00000589117 PPIAL4FP0DN26 164 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 SELLP14151 372 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 SUB1P53999 127 aaKnown RBP eCLIP6.05□□□□□ -1.44
ZNF540-206ENST00000589117 TAS2R45P59539 299 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 UBE2G2P60604 165 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 MIC13Q5XKP0 118 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 TMEM144Q7Z5S9 345 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 FAM216BQ8N7L0 139 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 Q8N7P7 452 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 NECAP1Q8NC96 275 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 ABHD5Q8WTS1 349 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 GATAD1Q8WUU5 269 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 SLC35E1Q96K37 410 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 TMEM167BQ9NRX6 74 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 SLC45A2Q9UMX9 530 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 PPIAL4AQ9Y536 164 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 A0A0G2JNJ9 132 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 CT45A6P0DMU7 189 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 CT45A5P0DMU8 189 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 CT45A7P0DMV0 189 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 TCF15Q12870 199 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 FOXL1Q12952 345 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 EFNB3Q15768 340 aa6.05□□□□□ -1.44
ZNF540-206ENST00000589117 ADIPOQQ15848 244 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms