RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 THNSL2Q86YJ6 484 aa9.69□□□□□ -0.86
CCBE1-203ENST00000589116 MMD2Q8IY49 270 aa9.69□□□□□ -0.86
CCBE1-203ENST00000589116 HSD17B11Q8NBQ5 300 aa9.69□□□□□ -0.86
CCBE1-203ENST00000589116 SLC24A4Q8NFF2 622 aa9.69□□□□□ -0.86
CCBE1-203ENST00000589116 RBMXL1Q96E39 390 aaKnown RBP9.69□□□□□ -0.86
CCBE1-203ENST00000589116 TMEM147Q9BVK8 224 aa9.69□□□□□ -0.86
CCBE1-203ENST00000589116 ZNF430Q9H8G1 570 aaPredicted RBP9.69□□□□□ -0.86
CCBE1-203ENST00000589116 NDUFA4L2Q9NRX3 87 aa9.69□□□□□ -0.86
CCBE1-203ENST00000589116 A0A096LNT2 108 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 TRAV20A0A0B4J274 112 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 A0A1W2PRD5 423 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 A0A1W2PRF3 423 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 A0A1W2PRM7 423 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 MOSP00540 346 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 FAM157CP0CG43 387 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 NPY1RP25929 384 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 RAB5CP51148 216 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 SSX2Q16385 188 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 SLC25A24Q6NUK1 477 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 PCNPQ8WW12 178 aaKnown RBP9.68□□□□□ -0.86
CCBE1-203ENST00000589116 SAT2Q96F10 170 aaPredicted RBP9.68□□□□□ -0.86
CCBE1-203ENST00000589116 RITA1Q96K30 269 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 GGACTQ9BVM4 153 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 SIGLEC9Q9Y336 463 aa9.68□□□□□ -0.86
CCBE1-203ENST00000589116 NPFFO15130 113 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 ATP6V0CP27449 155 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 LOXL1Q08397 574 aaPredicted RBP9.67□□□□□ -0.86
CCBE1-203ENST00000589116 EBI3Q14213 229 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 PRSS8Q16651 343 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 VWC2Q2TAL6 325 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 PRSS57Q6UWY2 283 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 MRPL41Q8IXM3 137 aaKnown RBP9.67□□□□□ -0.86
CCBE1-203ENST00000589116 OR2T10Q8NGZ9 312 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 SCGB1C1Q8TD33 95 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 HINT2Q9BX68 163 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 TNCP24821 2201 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 CENPVL3A0A0U1RRI6 287 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 UMAD1C9J7I0 102 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 RRHO14718 337 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 NBR2O15453 112 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 ACTL6BO94805 426 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 NDUFA3O95167 84 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 IGKV1D-33P01593 117 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 IGKV1-33P01594 117 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 MYOD1P15172 320 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 SAA4P35542 130 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 MRGPRG-AS1Q2M3A8 158 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 LRRC75BQ2VPJ9 315 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 BSXQ3C1V8 233 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 ETV3LQ6ZN32 361 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 PPP1R27Q86WC6 154 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 NPBQ8NG41 125 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 CXorf58Q96LI9 332 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 PSMG3Q9BT73 122 aaPredicted RBP9.67□□□□□ -0.86
CCBE1-203ENST00000589116 WDR61Q9GZS3 305 aaKnown RBP9.67□□□□□ -0.86
CCBE1-203ENST00000589116 GSX1Q9H4S2 264 aaPredicted RBP9.67□□□□□ -0.86
CCBE1-203ENST00000589116 TPSG1Q9NRR2 321 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 UQCC1Q9NVA1 299 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 METTL1Q9UBP6 276 aaKnown RBP9.67□□□□□ -0.86
CCBE1-203ENST00000589116 PFDN2Q9UHV9 154 aa9.67□□□□□ -0.86
CCBE1-203ENST00000589116 ZNF705EA8MWA4 302 aaPredicted RBP9.66□□□□□ -0.86
CCBE1-203ENST00000589116 PRSS46E5RG02 174 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 TRIM77I1YAP6 450 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 S100A1P23297 94 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 CNTFRP26992 372 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 BRS3P32247 399 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 BLOC1S1P78537 153 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 DLK1P80370 383 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 ERHP84090 104 aaKnown RBP9.66□□□□□ -0.86
CCBE1-203ENST00000589116 MMDQ15546 238 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 C2orf83Q53S99 150 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 COMMD7Q86VX2 200 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 DYNAPQ8N1N2 210 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 LINC01356Q8N9X3 169 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 OR2G3Q8NGZ4 309 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 EAF1Q96JC9 268 aaPredicted RBP9.66□□□□□ -0.86
CCBE1-203ENST00000589116 MDFIQ99750 246 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 SH3BGRL3Q9H299 93 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 KIAA1456Q9P272 454 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 TIMM9Q9Y5J7 89 aa9.66□□□□□ -0.86
CCBE1-203ENST00000589116 IGHV1-69DA0A0B4J2H0 117 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 UBE2L5PA0A1B0GUS4 154 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 FNDC10F2Z333 226 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 CA2P00918 260 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 IGHV1-69P01742 117 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 OPN1MWP04001 364 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 IFNA4P05014 189 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 SNRNP70P08621 437 aaKnown RBP9.65□□□□□ -0.86
CCBE1-203ENST00000589116 OPN1MW2P0DN77 364 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 OPN1MW3P0DN78 364 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 SNCAP37840 140 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 RPL27AP46776 148 aaKnown RBP9.65□□□□□ -0.86
CCBE1-203ENST00000589116 COMPP49747 757 aaPredicted RBP9.65□□□□□ -0.86
CCBE1-203ENST00000589116 HES1Q14469 280 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 Q5PR19 223 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 Q8N6K4 173 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 TMEM170AQ8WVE7 144 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 TAF15Q92804 592 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCBE1-203ENST00000589116 AJUBAQ96IF1 538 aa9.65□□□□□ -0.86
CCBE1-203ENST00000589116 FBXL15Q9H469 300 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms