RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 C6orf62Q9GZU0 229 aaPredicted RBP10.36□□□□□ -0.75
VMP1-209ENST00000588915 DNAH10Q8IVF4 4471 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 TRAV3A0A0B4J244 114 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 SULT1C2O00338 296 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 TNFSF12O43508 249 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 SERPINE2P07093 398 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 TRAPPC2P0DI81 140 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 TRAPPC2BP0DI82 140 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 ODF3L2Q3SX64 289 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 ZNF773Q6PK81 442 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 HOGA1Q86XE5 327 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 GIMAP1Q8WWP7 306 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 VCX3BQ9H321 246 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 MAP6D1Q9H9H5 199 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 TXNL4BQ9NX01 149 aaKnown RBP10.35□□□□□ -0.75
VMP1-209ENST00000588915 RHBDL2Q9NX52 303 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 COMMD9Q9P000 198 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 UBQLN2Q9UHD9 624 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 DAPK2Q9UIK4 370 aa10.35□□□□□ -0.75
VMP1-209ENST00000588915 IGHV3-35A0A0C4DH35 117 aa10.34□□□□□ -0.75
VMP1-209ENST00000588915 OR13C7P0DN81 318 aa10.34□□□□□ -0.75
VMP1-209ENST00000588915 UBE2UQ5VVX9 321 aa10.34□□□□□ -0.75
VMP1-209ENST00000588915 SLC25A24Q6NUK1 477 aa10.34□□□□□ -0.75
VMP1-209ENST00000588915 SFXN4Q6P4A7 337 aa10.34□□□□□ -0.75
VMP1-209ENST00000588915 DMBX1Q8NFW5 382 aa10.34□□□□□ -0.75
VMP1-209ENST00000588915 OR1L8Q8NGR8 309 aa10.34□□□□□ -0.75
VMP1-209ENST00000588915 GATAD1Q8WUU5 269 aa10.34□□□□□ -0.75
VMP1-209ENST00000588915 PHLDA1Q8WV24 401 aaPredicted RBP10.34□□□□□ -0.75
VMP1-209ENST00000588915 KRTAP17-1Q9BYP8 105 aa10.34□□□□□ -0.75
VMP1-209ENST00000588915 SLC5A7Q9GZV3 580 aa10.34□□□□□ -0.75
VMP1-209ENST00000588915 TMEM140Q9NV12 185 aa10.34□□□□□ -0.75
VMP1-209ENST00000588915 RRP15Q9Y3B9 282 aaKnown RBP10.34□□□□□ -0.75
VMP1-209ENST00000588915 ETV7Q9Y603 341 aa10.34□□□□□ -0.75
VMP1-209ENST00000588915 TRAV18A0A075B6X5 111 aa10.33□□□□□ -0.76
VMP1-209ENST00000588915 TEX50A0A1B0GTY4 177 aa10.33□□□□□ -0.76
VMP1-209ENST00000588915 OR2T8A6NH00 312 aa10.33□□□□□ -0.76
VMP1-209ENST00000588915 C15orf62A8K5M9 175 aa10.33□□□□□ -0.76
VMP1-209ENST00000588915 CBX5P45973 191 aa10.33□□□□□ -0.76
VMP1-209ENST00000588915 GABARAPL2P60520 117 aa10.33□□□□□ -0.76
VMP1-209ENST00000588915 WT1-ASQ06250 92 aa10.33□□□□□ -0.76
VMP1-209ENST00000588915 GVQW1Q8N7I0 195 aa10.33□□□□□ -0.76
VMP1-209ENST00000588915 OR10W1Q8NGF6 305 aa10.33□□□□□ -0.76
VMP1-209ENST00000588915 LGALS14Q8TCE9 139 aa10.33□□□□□ -0.76
VMP1-209ENST00000588915 NDUFA4L2Q9NRX3 87 aa10.33□□□□□ -0.76
VMP1-209ENST00000588915 C21orf62Q9NYP8 219 aa10.33□□□□□ -0.76
VMP1-209ENST00000588915 F11RQ9Y624 299 aaKnown RBP10.33□□□□□ -0.76
VMP1-209ENST00000588915 SMIM30A4D0T7 59 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 TMEM127O75204 238 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 RPA2P15927 270 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 ADMP35318 185 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 TCTAP57738 103 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 ZNF818PQ6ZRF7 136 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 RPP25LQ8N5L8 163 aaKnown RBP10.32□□□□□ -0.76
VMP1-209ENST00000588915 OR5AP2Q8NGF4 316 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 SCARB1Q8WTV0 552 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 LSM10Q969L4 123 aaKnown RBP10.32□□□□□ -0.76
VMP1-209ENST00000588915 CNBD2Q96M20 576 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 CHRDL1Q9BU40 450 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 MFFQ9GZY8 342 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 DIABLOQ9NR28 239 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 SMPXQ9UHP9 88 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 SSR3Q9UNL2 185 aa10.32□□□□□ -0.76
VMP1-209ENST00000588915 MARCH11A6NNE9 402 aa10.31□□□□□ -0.76
VMP1-209ENST00000588915 S1PR2O95136 353 aa10.31□□□□□ -0.76
VMP1-209ENST00000588915 CTSDP07339 412 aaPredicted RBP10.31□□□□□ -0.76
VMP1-209ENST00000588915 RPL35AP18077 110 aaKnown RBP10.31□□□□□ -0.76
VMP1-209ENST00000588915 F2RP25116 425 aa10.31□□□□□ -0.76
VMP1-209ENST00000588915 FCGR2BP31994 310 aaPredicted RBP10.31□□□□□ -0.76
VMP1-209ENST00000588915 ERVK-16P61578 105 aa10.31□□□□□ -0.76
VMP1-209ENST00000588915 AADACL3Q5VUY0 350 aa10.31□□□□□ -0.76
VMP1-209ENST00000588915 FCGR1BQ92637 280 aa10.31□□□□□ -0.76
VMP1-209ENST00000588915 TMEM56Q96MV1 263 aa10.31□□□□□ -0.76
VMP1-209ENST00000588915 C20orf24Q9BUV8 137 aa10.31□□□□□ -0.76
VMP1-209ENST00000588915 AUNIPQ9H7T9 357 aa10.31□□□□□ -0.76
VMP1-209ENST00000588915 FKBP11Q9NYL4 201 aa10.31□□□□□ -0.76
VMP1-209ENST00000588915 RAB26Q9ULW5 256 aa10.31□□□□□ -0.76
VMP1-209ENST00000588915 HERC2O95714 4834 aa10.3□□□□□ -0.76
VMP1-209ENST00000588915 MPTX1A8MV57 137 aa10.3□□□□□ -0.76
VMP1-209ENST00000588915 F8W735 103 aaPredicted RBP10.3□□□□□ -0.76
VMP1-209ENST00000588915 K7EIM0 57 aa10.3□□□□□ -0.76
VMP1-209ENST00000588915 SNAPC5O75971 98 aa10.3□□□□□ -0.76
VMP1-209ENST00000588915 CD5P06127 495 aa10.3□□□□□ -0.76
VMP1-209ENST00000588915 CTSGP08311 255 aa10.3□□□□□ -0.76
VMP1-209ENST00000588915 PTHLHP12272 177 aa10.3□□□□□ -0.76
VMP1-209ENST00000588915 GNRHRP30968 328 aa10.3□□□□□ -0.76
VMP1-209ENST00000588915 FXYD4P59646 89 aa10.3□□□□□ -0.76
VMP1-209ENST00000588915 RELQ04864 619 aaPredicted RBP10.3□□□□□ -0.76
VMP1-209ENST00000588915 DHRS11Q6UWP2 260 aa10.3□□□□□ -0.76
VMP1-209ENST00000588915 OR51H1Q8NH63 302 aa10.3□□□□□ -0.76
VMP1-209ENST00000588915 TXN2Q99757 166 aa10.3□□□□□ -0.76
VMP1-209ENST00000588915 RARRES2Q99969 163 aa10.3□□□□□ -0.76
VMP1-209ENST00000588915 C11orf68Q9H3H3 251 aaKnown RBP10.3□□□□□ -0.76
VMP1-209ENST00000588915 IGHV7-4-1A0A0J9YVY3 117 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 IFNA4P05014 189 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 PSMB9P28065 219 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 SDC2P34741 201 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 MFAP2P55001 183 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 HERV-K104P61576 105 aa10.29□□□□□ -0.76
VMP1-209ENST00000588915 IZUMO2Q6UXV1 221 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms