RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 RAB40CQ96S21 281 aa11.52□□□□□ -0.57
NPC1-207ENST00000588867 HIPK2Q9H2X6 1198 aa11.52□□□□□ -0.57
NPC1-207ENST00000588867 PLEKHA3Q9HB20 300 aa11.52□□□□□ -0.57
NPC1-207ENST00000588867 NDUFA4L2Q9NRX3 87 aa11.52□□□□□ -0.57
NPC1-207ENST00000588867 VPREB3Q9UKI3 123 aa11.52□□□□□ -0.57
NPC1-207ENST00000588867 E5RGE8 158 aa11.51□□□□□ -0.57
NPC1-207ENST00000588867 H3BP45 60 aa11.51□□□□□ -0.57
NPC1-207ENST00000588867 ARPC5O15511 151 aa11.51□□□□□ -0.57
NPC1-207ENST00000588867 FGF16O43320 207 aa11.51□□□□□ -0.57
NPC1-207ENST00000588867 APELAP0DMC3 54 aa11.51□□□□□ -0.57
NPC1-207ENST00000588867 SLC25A4P12235 298 aa11.51□□□□□ -0.57
NPC1-207ENST00000588867 CX3CL1P78423 397 aa11.51□□□□□ -0.57
NPC1-207ENST00000588867 C9orf152Q5JTZ5 239 aa11.51□□□□□ -0.57
NPC1-207ENST00000588867 ABHD5Q8WTS1 349 aa11.51□□□□□ -0.57
NPC1-207ENST00000588867 PSENENQ9NZ42 101 aa11.51□□□□□ -0.57
NPC1-207ENST00000588867 MSGN1A6NI15 193 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 TMEM50AO95807 157 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 AMY1AP04745 511 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 EIF2B2P49770 351 aaKnown RBP11.5□□□□□ -0.57
NPC1-207ENST00000588867 CAV2P51636 162 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 PAX9P55771 341 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 RPL23AP62750 156 aaKnown RBP11.5□□□□□ -0.57
NPC1-207ENST00000588867 SSBP2P81877 361 aaPredicted RBP11.5□□□□□ -0.57
NPC1-207ENST00000588867 PDLIM3Q53GG5 364 aaPredicted RBP11.5□□□□□ -0.57
NPC1-207ENST00000588867 ZNF562Q6V9R5 426 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 C16orf82Q7Z2V1 217 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 SRSF12Q8WXF0 261 aaKnown RBP11.5□□□□□ -0.57
NPC1-207ENST00000588867 PPP1R14BQ96C90 147 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 FAM103A1Q9BTL3 118 aaKnown RBP11.5□□□□□ -0.57
NPC1-207ENST00000588867 A0A1B0GW64 132 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 CGB1A6NKQ9 187 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 M0QZK8 103 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 HLA-DRB1P01911 266 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 LYL1P12980 280 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 AP2S1P53680 142 aaPredicted RBP11.5□□□□□ -0.57
NPC1-207ENST00000588867 SPANXN5Q5MJ07 72 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 SMIM8Q96KF7 97 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 CIB3Q96Q77 187 aaPredicted RBP11.5□□□□□ -0.57
NPC1-207ENST00000588867 HSPB9Q9BQS6 159 aa11.5□□□□□ -0.57
NPC1-207ENST00000588867 PAIP2BQ9ULR5 123 aaKnown RBP11.5□□□□□ -0.57
NPC1-207ENST00000588867 IGHV7-81A0A0B4J1V7 117 aa11.49□□□□□ -0.57
NPC1-207ENST00000588867 FAM24AA6NFZ4 105 aa11.49□□□□□ -0.57
NPC1-207ENST00000588867 GPR137BO60478 399 aa11.49□□□□□ -0.57
NPC1-207ENST00000588867 NUP62P37198 522 aaPredicted RBP11.49□□□□□ -0.57
NPC1-207ENST00000588867 BLCAPP62952 87 aa11.49□□□□□ -0.57
NPC1-207ENST00000588867 INO80EQ8NBZ0 244 aaPredicted RBP11.49□□□□□ -0.57
NPC1-207ENST00000588867 ARPC1AQ92747 370 aa11.49□□□□□ -0.57
NPC1-207ENST00000588867 C11orf1Q9H5F2 150 aa11.49□□□□□ -0.57
NPC1-207ENST00000588867 ZC4H2Q9NQZ6 224 aa11.49□□□□□ -0.57
NPC1-207ENST00000588867 WSB1Q9Y6I7 421 aa11.49□□□□□ -0.57
NPC1-207ENST00000588867 A0A1W2PN81 502 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 IFNA10P01566 189 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 CHRNA7P36544 502 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 VDAC2P45880 294 aaPredicted RBP11.48□□□□□ -0.57
NPC1-207ENST00000588867 P2RY1P47900 373 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 TUSC1Q2TAM9 212 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 TMEM65Q6PI78 240 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 OR2C3Q8N628 320 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 TNFSF18Q9UNG2 199 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 LINC01548A6NM66 108 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 HMSDA8MTL9 139 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 REG1AP05451 166 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 OR13C7P0DN81 318 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 RPL12P30050 165 aaKnown RBP11.48□□□□□ -0.57
NPC1-207ENST00000588867 SNCAP37840 140 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 ERHP84090 104 aaKnown RBP11.48□□□□□ -0.57
NPC1-207ENST00000588867 MFFQ9GZY8 342 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 PARP11Q9NR21 331 aa11.48□□□□□ -0.57
NPC1-207ENST00000588867 LYRM2Q9NU23 88 aaPredicted RBP11.48□□□□□ -0.57
NPC1-207ENST00000588867 F8P00451 2351 aa11.47□□□□□ -0.57
NPC1-207ENST00000588867 TAS2R30P59541 319 aa11.47□□□□□ -0.57
NPC1-207ENST00000588867 NDPQ00604 133 aa11.47□□□□□ -0.57
NPC1-207ENST00000588867 WT1-ASQ06250 92 aa11.47□□□□□ -0.57
NPC1-207ENST00000588867 ZNF418Q8TF45 676 aaPredicted RBP11.47□□□□□ -0.57
NPC1-207ENST00000588867 STRAPQ9Y3F4 350 aaKnown RBP11.47□□□□□ -0.57
NPC1-207ENST00000588867 MTORP42345 2549 aa11.47□□□□□ -0.57
NPC1-207ENST00000588867 DNAJC9-AS1A6NH13 148 aa11.47□□□□□ -0.57
NPC1-207ENST00000588867 TEX22C9J3V5 150 aa11.47□□□□□ -0.57
NPC1-207ENST00000588867 TSC22D2O75157 780 aa11.47□□□□□ -0.57
NPC1-207ENST00000588867 HKR1P10072 659 aa11.47□□□□□ -0.57
NPC1-207ENST00000588867 AREGP15514 252 aa11.47□□□□□ -0.57
NPC1-207ENST00000588867 RPP30P78346 268 aaKnown RBP11.47□□□□□ -0.57
NPC1-207ENST00000588867 TMEM267Q0VDI3 215 aaPredicted RBP11.47□□□□□ -0.57
NPC1-207ENST00000588867 MRPL41Q8IXM3 137 aaKnown RBP11.47□□□□□ -0.57
NPC1-207ENST00000588867 TMEM86BQ8N661 226 aa11.47□□□□□ -0.57
NPC1-207ENST00000588867 TMEM252Q8N6L7 170 aa11.47□□□□□ -0.57
NPC1-207ENST00000588867 FBXO7Q9Y3I1 522 aa11.47□□□□□ -0.57
NPC1-207ENST00000588867 IGLC7A0M8Q6 106 aa11.46□□□□□ -0.57
NPC1-207ENST00000588867 IGSF23A1L1A6 192 aa11.46□□□□□ -0.57
NPC1-207ENST00000588867 ATP6V0E1O15342 81 aa11.46□□□□□ -0.57
NPC1-207ENST00000588867 LY86O95711 162 aa11.46□□□□□ -0.57
NPC1-207ENST00000588867 METTL15P1P0C7V9 234 aa11.46□□□□□ -0.57
NPC1-207ENST00000588867 CXCL2P19875 107 aa11.46□□□□□ -0.57
NPC1-207ENST00000588867 LGALSLQ3ZCW2 172 aaPredicted RBP11.46□□□□□ -0.57
NPC1-207ENST00000588867 Q6ZS46 218 aa11.46□□□□□ -0.57
NPC1-207ENST00000588867 ACOT7LQ6ZUV0 252 aa11.46□□□□□ -0.57
NPC1-207ENST00000588867 LFNGQ8NES3 379 aa11.46□□□□□ -0.57
NPC1-207ENST00000588867 SLC24A4Q8NFF2 622 aa11.46□□□□□ -0.57
NPC1-207ENST00000588867 OR4C12Q96R67 309 aa11.46□□□□□ -0.57
NPC1-207ENST00000588867 SLC25A31Q9H0C2 315 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms