RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 RPL7L1Q6DKI1 246 aaKnown RBP20.77■□□□□ 0.92
SCAMP4-210ENST00000588555 TMEM217Q8N7C4 229 aa20.77■□□□□ 0.92
SCAMP4-210ENST00000588555 HINT2Q9BX68 163 aa20.77■□□□□ 0.92
SCAMP4-210ENST00000588555 HIPK2Q9H2X6 1198 aa20.77■□□□□ 0.92
SCAMP4-210ENST00000588555 ZFHX3Q15911 3703 aa20.77■□□□□ 0.92
SCAMP4-210ENST00000588555 C15orf62A8K5M9 175 aa20.77■□□□□ 0.91
SCAMP4-210ENST00000588555 FSHBP01225 129 aa20.77■□□□□ 0.91
SCAMP4-210ENST00000588555 DYNLT3P51808 116 aa20.77■□□□□ 0.91
SCAMP4-210ENST00000588555 UBA52P62987 128 aaKnown RBP20.77■□□□□ 0.91
SCAMP4-210ENST00000588555 STPG2Q8N412 459 aa20.77■□□□□ 0.91
SCAMP4-210ENST00000588555 OR5C1Q8NGR4 320 aa20.77■□□□□ 0.91
SCAMP4-210ENST00000588555 PLEKHA3Q9HB20 300 aa20.77■□□□□ 0.91
SCAMP4-210ENST00000588555 PMS2P5A8MQ11 134 aa20.76■□□□□ 0.91
SCAMP4-210ENST00000588555 TMEM11P17152 192 aa20.76■□□□□ 0.91
SCAMP4-210ENST00000588555 MAS1LP35410 378 aa20.76■□□□□ 0.91
SCAMP4-210ENST00000588555 CLCC1Q96S66 551 aa20.76■□□□□ 0.91
SCAMP4-210ENST00000588555 NOTCH2Q04721 2471 aa20.76■□□□□ 0.91
SCAMP4-210ENST00000588555 FCN1O00602 326 aa20.75■□□□□ 0.91
SCAMP4-210ENST00000588555 EXOSC2Q13868 293 aaKnown RBP20.75■□□□□ 0.91
SCAMP4-210ENST00000588555 C5orf64Q2M2E5 130 aa20.75■□□□□ 0.91
SCAMP4-210ENST00000588555 OR10W1Q8NGF6 305 aa20.75■□□□□ 0.91
SCAMP4-210ENST00000588555 PIFOQ8TCI5 191 aa20.75■□□□□ 0.91
SCAMP4-210ENST00000588555 TMEM170AQ8WVE7 144 aa20.75■□□□□ 0.91
SCAMP4-210ENST00000588555 KIAA1456Q9P272 454 aa20.75■□□□□ 0.91
SCAMP4-210ENST00000588555 INS-IGF2F8WCM5 200 aa20.74■□□□□ 0.91
SCAMP4-210ENST00000588555 COMPP49747 757 aaPredicted RBP20.74■□□□□ 0.91
SCAMP4-210ENST00000588555 CLINT1Q14677 625 aa20.74■□□□□ 0.91
SCAMP4-210ENST00000588555 ENY2Q9NPA8 101 aa20.74■□□□□ 0.91
SCAMP4-210ENST00000588555 MYO9AB2RTY4 2548 aa20.74■□□□□ 0.91
SCAMP4-210ENST00000588555 BPIFB3P59826 476 aa20.74■□□□□ 0.91
SCAMP4-210ENST00000588555 PLGLAQ15195 96 aa20.74■□□□□ 0.91
SCAMP4-210ENST00000588555 TNXAQ16473 311 aa20.74■□□□□ 0.91
SCAMP4-210ENST00000588555 ZNF767PQ75MW2 155 aa20.74■□□□□ 0.91
SCAMP4-210ENST00000588555 FAM96BQ9Y3D0 163 aa20.74■□□□□ 0.91
SCAMP4-210ENST00000588555 SMAD7O15105 426 aaKnown RBP20.73■□□□□ 0.91
SCAMP4-210ENST00000588555 UBAC2Q8NBM4 344 aa20.73■□□□□ 0.91
SCAMP4-210ENST00000588555 OR1S2Q8NGQ3 325 aa20.73■□□□□ 0.91
SCAMP4-210ENST00000588555 MXRA5Q9NR99 2828 aa20.73■□□□□ 0.91
SCAMP4-210ENST00000588555 NAV3Q8IVL0 2385 aa20.73■□□□□ 0.91
SCAMP4-210ENST00000588555 TLN2Q9Y4G6 2542 aa20.73■□□□□ 0.91
SCAMP4-210ENST00000588555 JTBO76095 146 aa20.72■□□□□ 0.91
SCAMP4-210ENST00000588555 IFNA10P01566 189 aa20.72■□□□□ 0.91
SCAMP4-210ENST00000588555 FBP1P09467 338 aa20.72■□□□□ 0.91
SCAMP4-210ENST00000588555 TPT1P13693 172 aaKnown RBP20.72■□□□□ 0.91
SCAMP4-210ENST00000588555 BSXQ3C1V8 233 aa20.72■□□□□ 0.91
SCAMP4-210ENST00000588555 BAP18Q8IXM2 172 aa20.72■□□□□ 0.91
SCAMP4-210ENST00000588555 PAIP2BQ9ULR5 123 aaKnown RBP20.72■□□□□ 0.91
SCAMP4-210ENST00000588555 ACTL6BO94805 426 aa20.72■□□□□ 0.91
SCAMP4-210ENST00000588555 IFNA7P01567 189 aa20.72■□□□□ 0.91
SCAMP4-210ENST00000588555 RPL27AP46776 148 aaKnown RBP20.72■□□□□ 0.91
SCAMP4-210ENST00000588555 RPP30P78346 268 aaKnown RBP20.72■□□□□ 0.91
SCAMP4-210ENST00000588555 OR8G2PQ6IF36 304 aa20.72■□□□□ 0.91
SCAMP4-210ENST00000588555 SLC24A4Q8NFF2 622 aa20.72■□□□□ 0.91
SCAMP4-210ENST00000588555 A0A1W2PN81 502 aa20.71■□□□□ 0.91
SCAMP4-210ENST00000588555 NCBP2LA6PVI3 153 aaKnown RBP20.71■□□□□ 0.91
SCAMP4-210ENST00000588555 CA2P00918 260 aa20.71■□□□□ 0.91
SCAMP4-210ENST00000588555 CHRNA7P36544 502 aa20.71■□□□□ 0.91
SCAMP4-210ENST00000588555 HBG1P69891 147 aa20.71■□□□□ 0.91
SCAMP4-210ENST00000588555 HBG2P69892 147 aa20.71■□□□□ 0.91
SCAMP4-210ENST00000588555 WT1-ASQ06250 92 aa20.71■□□□□ 0.91
SCAMP4-210ENST00000588555 ALKAL2Q6UX46 152 aa20.71■□□□□ 0.91
SCAMP4-210ENST00000588555 ARV1Q9H2C2 271 aa20.71■□□□□ 0.91
SCAMP4-210ENST00000588555 ITGB1BP2Q9UKP3 347 aa20.71■□□□□ 0.91
SCAMP4-210ENST00000588555 GNB1P62873 340 aa20.7■□□□□ 0.9
SCAMP4-210ENST00000588555 Q8N9W7 124 aa20.7■□□□□ 0.9
SCAMP4-210ENST00000588555 NANPQ8TBE9 248 aa20.7■□□□□ 0.9
SCAMP4-210ENST00000588555 ATP5SQ99766 215 aa20.7■□□□□ 0.9
SCAMP4-210ENST00000588555 OTOGQ6ZRI0 2925 aa20.7■□□□□ 0.9
SCAMP4-210ENST00000588555 IGLC7A0M8Q6 106 aa20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 NPY1RP25929 384 aa20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 SLC38A11Q08AI6 406 aa20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 PHYHIPLQ96FC7 376 aa20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 SSX3Q99909 188 aa20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 C1RLQ9NZP8 487 aa20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 TEX22C9J3V5 150 aa20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 PRSS46E5RG02 174 aa20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 HTR2BP41595 481 aa20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 KRTAP1-1Q07627 177 aa20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 ZNF266Q14584 549 aa20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 LRRC75BQ2VPJ9 315 aa20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 OR10P1Q8NGE3 313 aa20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 SRSF12Q8WXF0 261 aaKnown RBP20.69■□□□□ 0.9
SCAMP4-210ENST00000588555 BORCS7-ASMTA0A0B4J1R7 106 aa20.68■□□□□ 0.9
SCAMP4-210ENST00000588555 OR8U8P0C7N1 319 aa20.68■□□□□ 0.9
SCAMP4-210ENST00000588555 EIF5AP63241 154 aaKnown RBP20.68■□□□□ 0.9
SCAMP4-210ENST00000588555 BCL6BQ8N143 479 aaPredicted RBP20.68■□□□□ 0.9
SCAMP4-210ENST00000588555 UBQLN2Q9UHD9 624 aa20.68■□□□□ 0.9
SCAMP4-210ENST00000588555 DFFBO76075 338 aa20.67■□□□□ 0.9
SCAMP4-210ENST00000588555 RNASE2P10153 161 aaKnown RBP20.67■□□□□ 0.9
SCAMP4-210ENST00000588555 AANATQ16613 207 aa20.67■□□□□ 0.9
SCAMP4-210ENST00000588555 C2orf83Q53S99 150 aa20.67■□□□□ 0.9
SCAMP4-210ENST00000588555 C9orf139Q6ZV77 190 aa20.67■□□□□ 0.9
SCAMP4-210ENST00000588555 SCARB1Q8WTV0 552 aa20.67■□□□□ 0.9
SCAMP4-210ENST00000588555 ACANP16112 2415 aa20.67■□□□□ 0.9
SCAMP4-210ENST00000588555 SCAF4O95104 1147 aaKnown RBP20.67■□□□□ 0.9
SCAMP4-210ENST00000588555 ATP5IP56385 69 aaPredicted RBP20.67■□□□□ 0.9
SCAMP4-210ENST00000588555 ERHP84090 104 aaKnown RBP20.67■□□□□ 0.9
SCAMP4-210ENST00000588555 ETV3LQ6ZN32 361 aa20.67■□□□□ 0.9
SCAMP4-210ENST00000588555 LILRB2Q8N423 598 aa20.67■□□□□ 0.9
SCAMP4-210ENST00000588555 PINX1Q96BK5 328 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms